| CoNCRAtlas ID | CoMIRGH041 |
|---|---|
| Mature miRNA sequence | UUCCCAAAACCUCCAAUUCCAA |
| Locus | A07:10664444-10664706(+) |
| Alignment | Displayed Location: A07:10664513-10664627 Strand: + UGAAGUUUCUGGUAAUUAUAGGAAUUGCGUUUUUGGGAAGAAGCACGAUCGAUCUGCAUUCGCCACUAAUUUCUUCCCAAAACCUCCAAUUCCAAUGAUUUCCAGAAACUUUUCC .(((((((((((.((((((.(((((((.(.(((((((((((((......(((.......))).......))))))))))))).)..))))))).)))))).)))))))))))))) .........................................................................UUCCCAAAACCUCCAAUUCCAA.................... ghi-miR482c ....................GGAAUUGCGUUUUUGGGAAGA.......................................................................... ghi-miR482c* |
| miRNA family | miR482 |
Expression profile
| Tissue specificity index | ovule: 0.0394; fiber: 0.0697; shoot apical: 0.0646; ovule and fiber: 0.0491; cotyledon: 0.088; cotton boll: 0.0289; callus: 0.0269; leaf: 0.2721; anthers: 0.0718; hypocotyls: 0.1449; seedlings: 0.1445 | Tau: 0.7325 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH34022, CoLNCGH34021, CoLNCGH44621, CoLNCGH44620, CoLNCGH44619, CoLNCGH44618, CoLNCGH06119, CoLNCGH06120, CoLNCGH06122, CoLNCGH06123 |
|---|
| Target CDS | Gh_A12G185100.2, Gh_A12G185100.1, Gh_A12G185100.3, Gh_D12G180800.1, Gh_A08G271600.1, Gh_D03G173900.1, Gh_D13G228300.1, Gh_A12G272600.1, Gh_D12G267000.1, Gh_D10G253300.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 24391949 | miR482 regulation of NBS-LRR defense genes during fungal pathogen infection in cotton |