| CoNCRAtlas ID | CoMIRGH039 |
|---|---|
| Mature miRNA sequence | UGAAUCUAGUUUCUCUCUUAC |
| Locus | A06:121768249-121768366(-) |
| Alignment | Displayed Location: A06:121768251-121768377 Strand: - UAUGCACUUUAAUUGGCUUAUGAAUCUAGUUUCUCUCUUACUCCAUUAUUCAUAUUUUCCUUGUGAAAAUAUGUCUUCAAGAGAGUAAGGGAAAGACUAGAUUCAUAACCCAACAUAAGUGAUCAAC ))))(((((...((((.(((((((((((((((.(((((((((((......(((((((((.....))))))))).......).)))))))))).))))))))))))))).))))...)))))...... ....................UGAAUCUAGUUUCUCUCUUAC...................................................................................... ghi-miR1438 ......................................................................................AAGGGAAAGACUAGAUUCAUA.................... ghi-miR1438* |
| miRNA family | miR1438 |
Expression profile
| Tissue specificity index | fiber: 0.5098; shoot apical: 0.0598; ovule and fiber: 0.0001; cotyledon: 0.0001; cotton boll: 0.0012; callus: 0.0007; leaf: 0.4133; anthers: 0.0003; hypocotyls: 0.0145; seedlings: 0.0003 | Tau: 0.9039 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH06582, CoLNCGH06582, CoLNCGH06583, CoLNCGH06582, CoLNCGH06583, CoLNCGH06583, CoLNCGH06583, CoLNCGH06582, CoLNCGH41962, CoLNCGH40702 |
|---|
| Target CDS | Gh_D02G263700.1, Gh_A03G248200.1, Gh_D02G263600.1, Gh_D09G157000.1, Gh_A09G166700.1, Gh_A09G239200.1, Gh_D09G230400.1, Gh_A01G123800.1, Gh_D01G122900.1, Gh_A05G058800.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |