| CoNCRAtlas ID | CoMIRGH036 |
|---|---|
| Mature miRNA sequence | CUGAAUCUAGUUUCUCUCUUGC |
| Locus | A06:121711394-121711656(-) |
| Alignment | Displayed Location: A06:121711543-121711670 Strand: - AUAUGAACUUUGAUUGGCUUCUGAAUCUAGUUUCUCUCUUGCUCCAUUUUUCAUAUUUUCCUUGUGAAAAUAUGUCUUCAAGAGAGUAAGGGAGAGCUAGAUUCAUAACCCAGCAAAAGUCAUCAACU .((((((.((((.((((.((.(((((((((((.((((((((((((......(((((((((.....))))))))).......).)))))))))))))))))))))).)).))))))))((.((...... ....................CUGAAUCUAGUUUCUCUCUUGC...................................................................................... ghi-miR1419a .......................................................................................AAGGGAGAGCUAGAUUCAUAA.................... ghi-miR1419a* |
| miRNA family | miR1419 |
Expression profile
| Tissue specificity index | ovule: 0.007; fiber: 0.1856; shoot apical: 0.1331; ovule and fiber: 0.0017; cotyledon: 0.0008; cotton boll: 0.0026; callus: 0.0009; leaf: 0.6555; anthers: 0.0049; hypocotyls: 0.0011; seedlings: 0.0068 | Tau: 0.9475 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH06582, CoLNCGH06582, CoLNCGH06583, CoLNCGH06582, CoLNCGH06583, CoLNCGH06583, CoLNCGH06582, CoLNCGH06582, CoLNCGH06583, CoLNCGH06583 |
|---|
| Target CDS | Gh_D02G263700.1, Gh_A03G248200.1, Gh_D02G263600.1, Gh_D06G212400.1, Gh_D07G026900.1, Gh_A07G025700.1, Gh_A11G278500.1, Gh_D11G278200.1, Gh_D10G167600.1, Gh_A05G208700.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |