| CoNCRAtlas ID | CoMIRGH031 |
|---|---|
| Mature miRNA sequence | UGACAGAAGAGAGUGAGCAC |
| Locus | A05:5639298-5639396(+) |
| Alignment | Displayed Location: A05:5639284-5639405 Strand: + CUUCUUUGGGACAUAGAAAUUGACAGAAGAGAGUGAGCACACAGAGGCACUUGUAUAAGGCUAUACUUCUGCUUUUGCGUGCUCACUUCUCUUUUUGUCAGUUUCCAGUGCCGGAAUUUGAU ......(((((((..(((((((((((((((((((((((((.((((((((...(((((....)))))...)))))))).)))))))).)))).)))))))))))))(((.(((((((..(((( ....................UGACAGAAGAGAGUGAGCAC.................................................................................. ghi-miR157 ................................................................................GCUCACUUCUCUUUUUGUCAGU.................... ghi-miR157* |
| miRNA family | miR157 |
Expression profile
| Tissue specificity index | fiber: 0.0002; shoot apical: 0.0651; cotyledon: 0.0042; callus: 0.0004; leaf: 0.0609; anthers: 0.0022; hypocotyls: 0.862; seedlings: 0.005 | Tau: 0.984 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH29713, CoLNCGH02111, CoLNCGH34498, CoLNCGH44410, CoLNCGH44411, CoLNCGH10303, CoLNCGH10302, CoLNCGH33545, CoLNCGH33544, CoLNCGH44573 |
|---|
| Target CDS | Gh_A13G086100.4, Gh_D13G092600.1, Gh_D13G092600.2, Gh_A13G086100.3, Gh_D01G171200.1, Gh_A03G148200.1, Gh_A03G148200.2, Gh_D02G166800.1, Gh_A01G173100.1, Gh_A01G173100.2 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |