| CoNCRAtlas ID | CoMIRGH025 |
|---|---|
| Mature miRNA sequence | UGCCUGGCUCCCUGUAUGCCA |
| Locus | A05:108847897-108847988(-) |
| Alignment | Displayed Location: A05:108847884-108848004 Strand: - AUGGCACACAUAUAUGUAUAUGCCUGGCUCCCUGUAUGCCAUUUGCAGAACCCAUCGAACAUCGAUGGCCUCCGUGGAUGGCGUAUGAGGAGCCAAGCAUAUAUUCCAUGUAUGUAUAUAC ))).).)((((((((((((((((.(((((((.((((((((((((((.((..(((((((...)))))))..)).)))))))))))))).))))))).)))))))...)))))))))...... ....................UGCCUGGCUCCCUGUAUGCCA................................................................................ ghi-miR160a ................................................................................GCGUAUGAGGAGCCAAGCAUA.................... ghi-miR160a* |
| miRNA family | miR160 |
Expression profile
| Tissue specificity index | ovule: 0.0047; fiber: 0.02; shoot apical: 0.2473; ovule and fiber: 0.0312; cotyledon: 0.0016; cotton boll: 0.0021; callus: 0.0006; leaf: 0.106; anthers: 0.0489; hypocotyls: 0.5367; seedlings: 0.0008 | Tau: 0.9137 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH03813, CoLNCGH27436, CoLNCGH27436, CoLNCGH25995, CoLNCGH25994, CoLNCGH03815, CoLNCGH03814, CoLNCGH25994, CoLNCGH21237, CoLNCGH03815 |
|---|
| Target CDS | Gh_D05G102300.1, Gh_A03G044600.1, Gh_A03G044600.2, Gh_D03G152600.1, Gh_D03G152600.2, Gh_A05G090400.1, Gh_A05G418700.1, Gh_D04G003300.1, Gh_A10G210600.1, Gh_D06G044400.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 28327647 | MicroRNA expression profiles during cotton (Gossypium hirsutum L) fiber early development |