CoNCRAtlas


CoNCRAtlas ID CoMIRGH024
Mature miRNA sequence AGAGGUGUAUUGGAUUAGAGGUGC
Locus A05:107029319-107029385(-)
Alignment 
Displayed Location: A05:107029316-107029403 Strand: -
CUUUCUUAUCCCCUUAGGGUGCGUUUGGUUCGCUGUAUUGGAAUAGAGGUGUAUUGGAUUAGAGGUGCAUUGGGAUUAGAGGUGUAUU
((((...(((((......((((.(((((((((.((((((........)))))).))))))))).))))...))))).))))))....(
............................................AGAGGUGUAUUGGAUUAGAGGUGC.................... ghi-miRN8
....................GCGUUUGGUUCGCUGUAUUGGAAU............................................ ghi-miRN8*
miRNA family miRN8

Expression profile

Tissue specificity indexovule: 0.006; fiber: 0.2027; shoot apical: 0.0191; ovule and fiber: 0.0162; cotton boll: 0.5452; callus: 0.0735; leaf: 0.069; anthers: 0.0179; hypocotyls: 0.0504 | Tau: 0.9166

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH22700, CoLNCGH22701, CoLNCGH22702, CoLNCGH22703, CoLNCGH37426, CoLNCGH22087, CoLNCGH22086, CoLNCGH22089, CoLNCGH22090, CoLNCGH22091
Target CDS Gh_D10G086700.1, Gh_D06G235300.1, Gh_A13G206100.1, Gh_D12G248400.1, Gh_A09G163700.1, Gh_D09G154000.1, Gh_D02G060400.1, Gh_D08G267100.1, Gh_A08G276900.1, Gh_A11G334200.1
sORF
Reference
PMID Title
No references available