CoNCRAtlas



CoNCRAtlas ID CoMIRGH020
Mature miRNA sequence UGAUUGCAUUUUACCCCUCUA
Locus A04:82978671-82978781(+)
Alignment
Displayed Location: A04:82978652-82978801 Strand: +
AAAAGUCUUUGUACUAAGUUUGAUUGCAUUUUACCCCUCUACUAAAAAAAAGGGCAAAUUAGUCCCUAUACAAAAUCAAAGAGCAAACAGGCCCAUGUUUUUUUAGUAAAGGGGGUAAAAUGCAAUCUAACCCUUAGUACAGGGUCUCCA
...((.((((((((((((...(((((((((((((((((.(((((((((((.((((.......((................))........))))...)))))))))))..))))))))))))))))).....)))))))))))).))...
....................UGAUUGCAUUUUACCCCUCUA............................................................................................................. ghi-miR8764a
.............................................................................................................AGGGGGUAAAAUGCAAUCUAA.................... ghi-miR8764a
miRNA family miR8764

Expression profile

Tissue specificity indexovule: 0.006; fiber: 0.0314; shoot apical: 0.0814; cotyledon: 0.0221; cotton boll: 0.0038; callus: 0.0037; leaf: 0.1919; anthers: 0.0395; hypocotyls: 0.5911; seedlings: 0.0291 | Tau: 0.9308
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
A048297863982978814.Mutator_TIR_transposon
Target lncRNA CoLNCGH07022, CoLNCGH06849, CoLNCGH29584, CoLNCGH22332, CoLNCGH20923, CoLNCGH04651, CoLNCGH08893, CoLNCGH38828, CoLNCGH38827, CoLNCGH51024
Target CDS Gh_A09G264800.1, Gh_D09G254300.1, Gh_A11G293700.1, Gh_D11G293500.1, Gh_A02G061300.1, Gh_D12G121900.1, Gh_A12G197800.1, Gh_Contig01109G001800.1, Gh_A05G243100.1, Gh_A13G107500.1
sORF
Reference
PMID Title
0NA