| CoNCRAtlas ID | CoMIRGH019 |
|---|---|
| Mature miRNA sequence | AAGGCAAAGGAAGAAAAGAGUGA |
| Locus | A04:81746954-81747041(-) |
| Alignment | Displayed Location: A04:81746935-81747061 Strand: - AUCGUUGAAAUCAGAUCGGAAAGGCAAAGGAAGAAAAGAGUGAAAGAUUUGGGUUUUGAGAAAAUCAAUUCAAAACGACUGGGUUCACUCUUUUUUUCCUGCCUUGCUGAUCUUUUUGGGGUUCUUC ...)))......(((((((.((((((..((((((((((((((((........((((((((........)))))))).......)))))))))))))))))))))).)))))))((((((((....)) ....................AAGGCAAAGGAAGAAAAGAGUGA.................................................................................... ghi-miRN6 ......................................................................................ACUCUUUUUUUCCUGCCUUGC.................... ghi-miRN6* |
| miRNA family | miRN6 |
Expression profile
| Tissue specificity index | ovule: 0.0108; fiber: 0.0746; shoot apical: 0.0706; ovule and fiber: 0.0199; cotyledon: 0.0028; cotton boll: 0.038; leaf: 0.1965; anthers: 0.0933; hypocotyls: 0.4803; seedlings: 0.0132 | Tau: 0.8918 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH37762, CoLNCGH37763, CoLNCGH25248, CoLNCGH25249, CoLNCGH06550, CoLNCGH25727, CoLNCGH25728, CoLNCGH07386, CoLNCGH06549, CoLNCGH35164 |
|---|
| Target CDS | Gh_A11G162000.1, Gh_A04G100300.1, Gh_D04G138400.1, Gh_D06G224500.1, Gh_A06G071700.1, Gh_D06G070000.1, Gh_D11G163100.1, Gh_A11G256400.1, Gh_A02G173700.1, Gh_D13G168800.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |