| CoNCRAtlas ID | CoMIRGH013 |
|---|---|
| Mature miRNA sequence | UUUUGAACUGGAUUUGCCGACU |
| Locus | A03:1465949-1466099(-) |
| Alignment | Displayed Location: A03:1465967-1466083 Strand: - GUCUUAGUUUGCGUCUUGUCUUUUGAACUGGAUUUGCCGACUUGAACUGCGUUGUUGAAGGUUUACAAAACCCGAGCCUGCAAAUCCAGUCAAAAGUUAAACCGGGCUGAGAUUUAC (((((((((((.((.(((.(((((((.((((((((((.(.(((((((......)))...(((((...))))))))).).))))))))))))))))).)))))))))))))))).... ....................UUUUGAACUGGAUUUGCCGACU........................................................................... ghi-miR2949a ............................................................................CCUGCAAAUCCAGUCAAAAGU.................... ghi-miR2949a* |
| miRNA family | miR2949 |
Expression profile
| Tissue specificity index | ovule: 0.1552; fiber: 0.1291; shoot apical: 0.0255; ovule and fiber: 0.0173; cotyledon: 0.1048; cotton boll: 0.0165; callus: 0.0479; leaf: 0.2322; anthers: 0.0224; hypocotyls: 0.1923; seedlings: 0.0568 | Tau: 0.6693 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH46040, CoLNCGH46041, CoLNCGH18389, CoLNCGH00459, CoLNCGH00458, CoLNCGH00457, CoLNCGH00456, CoLNCGH00455, CoLNCGH00453, CoLNCGH00452 |
|---|
| Target CDS | Gh_D12G207200.3, Gh_A13G067900.1, Gh_D03G186800.1, Gh_A12G114000.1, Gh_A03G012400.1, Gh_D03G186600.1, Gh_D03G186900.1, Gh_A04G099000.1, Gh_A10G231500.1, Gh_D12G113900.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 32074966 | Different MicroRNA Families Involved in Regulating High Temperature Stress Response during Cotton ( Gossypium hirsutum L.) Anther Development |