| CoNCRAtlas ID | CoMIRGH012 |
|---|---|
| Mature miRNA sequence | CGAAGUCCUUAGGGGGGGUGC |
| Locus | A03:104143384-104143496(-) |
| Alignment | Displayed Location: A03:104143373-104143508 Strand: - AAUCAAGGCUUUUCUCGUUCACUCUCCCUCAAGGGCUUCCCCAACAUGACAUGCAUGGUGCUAGCUUAAUGCUGCCUGCAUAUGGAAAUGCUUGGCGAAGUCCUUAGGGGGGGUGCAUGAGACAUUAUUGUCUUGU (..((((((..(((((((.((((((((((.(((((((((.(((((((..((((((.(((...(((.....))))))))))..))...))).)))).))))))))))))))))))).))))))....)..))))))( ...............................................................................................CGAAGUCCUUAGGGGGGGUGC.................... ghi-miRN3 ....................ACUCUCCCUCAAGGGCUUCCCC.............................................................................................. ghi-miRN3* |
| miRNA family | miRN3 |
Expression profile
| Tissue specificity index | ovule: 0.0189; fiber: 0.5745; shoot apical: 0.0261; ovule and fiber: 0.0006; cotton boll: 0.1685; leaf: 0.1114; anthers: 0.0814; hypocotyls: 0.0187 | Tau: 0.9259 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH39075, CoLNCGH39075, CoLNCGH52390, CoLNCGH52389, CoLNCGH44441, CoLNCGH44442, CoLNCGH52390, CoLNCGH52389, CoLNCGH45751, CoLNCGH15111 |
|---|
| Target CDS | Gh_A04G002600.1, Gh_D05G402800.1, Gh_A09G272500.1, Gh_D09G261700.1, Gh_A01G223800.1, Gh_A01G163000.1, Gh_D01G166300.1, Gh_D01G219600.1, Gh_A07G015500.1, Gh_D05G229700.2 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |