| CoNCRAtlas ID | CoMIRGH008 |
|---|---|
| Mature miRNA sequence | UGCUGAAGAGUGAGAGCGCAU |
| Locus | A03:10158225-10158365(+) |
| Alignment | Displayed Location: A03:10158238-10158348 Strand: + UAAAGAGCGGGAAUCAUAGCUGCUGAAGAGUGAGAGCGCAUUGUGUGGCACCUUGGGUUCAAACCACCUUGGGCUCUUACUCUUCAGCAGCCAUGGUUCUUGCCCUUCAGC (.(((.(((((((((((.(((((((((((((((((((.((..((((((.(((...))))))...)))..)).))))))))))))))))))).))))))))))).))).))) ....................UGCUGAAGAGUGAGAGCGCAU...................................................................... ghi-miRN1 ......................................................................GGGCUCUUACUCUUCAGCAGC.................... ghi-miRN1* |
| miRNA family | miRN1 |
Expression profile
| Tissue specificity index | ovule: 0.0153; fiber: 0.0992; shoot apical: 0.1688; ovule and fiber: 0.0336; cotyledon: 0.0096; cotton boll: 0.0242; callus: 0.0288; leaf: 0.111; anthers: 0.1168; hypocotyls: 0.3769; seedlings: 0.0158 | Tau: 0.8347 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH37643, CoLNCGH37642, CoLNCGH11020, CoLNCGH27474, CoLNCGH47902, CoLNCGH47901, CoLNCGH47900, CoLNCGH47899, CoLNCGH47894, CoLNCGH47895 |
|---|
| Target CDS | Gh_A08G139500.2, Gh_D08G138600.1, Gh_D08G138600.2, Gh_A08G139500.1, Gh_A07G161100.1, Gh_D07G159800.1, Gh_A12G011800.1, Gh_D12G010800.1, Gh_D12G010800.2, Gh_A07G155400.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |