| CoNCRAtlas ID | CoMIRGH007 |
|---|---|
| Mature miRNA sequence | UCUUUCCUAUGCCCCCCAUUCC |
| Locus | A03:100037817-100037992(+) |
| Alignment | Displayed Location: A03:100037843-100037989 Strand: + GAGUUUCUGGAAAUUUUUGGAAGUGGGGUGCGAGGAAAGAUCAUUUCUCUUCUCUUUUUUAUAUGUACACACACACACACACACACACAAAGAGAUCAAACCAGAUCUUUCCUAUGCCCCCCAUUCCACUGAUUUCUAGUUCUUCUU (((...(((((((((..(((((.(((((.(((((((((((((........(((((((......(((..............))).....)))))))........)))))))))).))).))))))))))..)))))))))..))).)) .........................................................................................................UCUUUCCUAUGCCCCCCAUUCC.................... ghi-miR482a ....................AAGUGGGGUGCGAGGAAAGAUC......................................................................................................... ghi-miR482a* |
| miRNA family | miR482 |
Expression profile
| Tissue specificity index | ovule: 0.0428; fiber: 0.1317; shoot apical: 0.0577; cotyledon: 0.4548; cotton boll: 0.0407; callus: 0.0149; leaf: 0.0961; anthers: 0.0332; hypocotyls: 0.0825; seedlings: 0.0456 | Tau: 0.8801 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH47744, CoLNCGH47743, CoLNCGH47742, CoLNCGH47741, CoLNCGH47740, CoLNCGH47739, CoLNCGH47737, CoLNCGH47738, CoLNCGH20057, CoLNCGH20056 |
|---|
| Target CDS | Gh_A11G043200.1, Gh_D10G264300.1, Gh_A08G045100.1, Gh_D08G045100.1, Gh_A01G072200.1, Gh_D10G100500.1, Gh_A11G088800.1, Gh_D11G089600.1, Gh_A04G020300.1, Gh_A01G200500.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25572837 | Small RNA sequencing identifies miRNA roles in ovule and fibre development |