CoNCRAtlas


CoNCRAtlas ID CoMIRGB105
Mature miRNA sequence UCUCGGACCAGGCUUCAUUCC
Locus D11:50134152-50134313(+)
Alignment 
Displayed Location: CM018225.1:50134170-50134301 Strand: +
GAAGAAAAGAGGGUGUAUGGAAUGAAGUUUGAUCCAAGAUCCAUCAAUCAUCUCUCUUUUUUAAGUCAUGAAUUAUGAUGAUAUUAAUGGAUCUCGGACCAGGCUUCAUUCCUCACACCAUGCUUUUCCAUU
...((((((..(((((..(((((((((((((.(((.((((((((..((((((........................))))))....)))))))).))).)))))))))))))..)))))...))))))))))
...........................................................................................UCUCGGACCAGGCUUCAUUCC.................... gba-miR166l
....................AAUGAAGUUUGAUCCAAGAUC........................................................................................... gba-miR166l*
miRNA family miR166

Expression profile

Tissue specificity indexroot: 0.1741; shoot apical: 0.0097; fiber: 0.0268; all tissues: 0.7893 | Tau: 0.9333
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
D115013365550136535+CoLNCGB24881
D115013388950136535+CoLNCGB24882
Target lncRNA CoLNCGB13038, CoLNCGB13040, CoLNCGB13041, CoLNCGB14106, CoLNCGB14105, CoLNCGB27744, CoLNCGB27743, CoLNCGB27741, CoLNCGB27736, CoLNCGB00665
Target CDS GB_A09G1508, GB_A01G2349, GB_D01G2423, GB_A09G1681, GB_D09G1527, GB_A03G0924, GB_A05G3613, GB_D04G0820, GB_D10G2642, GB_D03G0189
sORF
Reference
PMID Title
0NA