| CoNCRAtlas ID | CoMIRGB099 |
|---|---|
| Mature miRNA sequence | UGAAGCUGCCAGCAUGAUCUt |
| Locus | D10:33366402-33366486(+) |
| Alignment | Displayed Location: CM018224.1:33366389-33366504 Strand: +
UUUGGUGCUCCACCAUCAGAUGAAGCUGCCAGCAUGAUCUUAAUUUCCCUUCUUUUUUCAAUCGAGGAAAAGAUCAGAUCAUGUGGCAGUUUCACCAGUUGCUGCUAGCACAAUAU
....(((((.((.((.(.(.(((((((((((.((((((((...(((.((((..((....))..)))).)))....))))))))))))))))))).).).)).))..))))).....
....................UGAAGCUGCCAGCAUGAUCUU........................................................................... gba-miR167c
............................................................................GAUCAUGUGGCAGUUUCACC.................... gba-miR167c*
|
| miRNA family | miR167 |
Expression profile
| Tissue specificity index | Ovule: 0.1141; root: 0.0015; shoot apical: 0.2013; fiber: 0.6832 | Tau: 0.8841 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGB02038, CoLNCGB02039, CoLNCGB17948, CoLNCGB17949, CoLNCGB17950, CoLNCGB17951, CoLNCGB18589, CoLNCGB18588, CoLNCGB18587, CoLNCGB18586 |
|---|
| Target CDS | GB_D11G2841, GB_A07G2380, GB_A06G2045, GB_D06G2129, GB_A02G0119, GB_D08G1225, GB_A09G1094, GB_D09G2541, GB_D05G0695, GB_A06G0997 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25131375 | Small RNA and degradome profiling reveals a role for miRNAs and their targets in the developing fibers of Gossypium barbadense |