CoNCRAtlas


CoNCRAtlas ID CoMIRGB099
Mature miRNA sequence UGAAGCUGCCAGCAUGAUCUt
Locus D10:33366402-33366486(+)
Alignment 
Displayed Location: CM018224.1:33366389-33366504 Strand: +
UUUGGUGCUCCACCAUCAGAUGAAGCUGCCAGCAUGAUCUUAAUUUCCCUUCUUUUUUCAAUCGAGGAAAAGAUCAGAUCAUGUGGCAGUUUCACCAGUUGCUGCUAGCACAAUAU
....(((((.((.((.(.(.(((((((((((.((((((((...(((.((((..((....))..)))).)))....))))))))))))))))))).).).)).))..))))).....
....................UGAAGCUGCCAGCAUGAUCUU........................................................................... gba-miR167c
............................................................................GAUCAUGUGGCAGUUUCACC.................... gba-miR167c*
miRNA family miR167

Expression profile

Tissue specificity indexOvule: 0.1141; root: 0.0015; shoot apical: 0.2013; fiber: 0.6832 | Tau: 0.8841
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
D103336606033368874+CoLNCGB23124
Target lncRNA CoLNCGB02038, CoLNCGB02039, CoLNCGB17948, CoLNCGB17949, CoLNCGB17950, CoLNCGB17951, CoLNCGB18589, CoLNCGB18588, CoLNCGB18587, CoLNCGB18586
Target CDS GB_D11G2841, GB_A07G2380, GB_A06G2045, GB_D06G2129, GB_A02G0119, GB_D08G1225, GB_A09G1094, GB_D09G2541, GB_D05G0695, GB_A06G0997
sORF
Reference
PMID Title
25131375Small RNA and degradome profiling reveals a role for miRNAs and their targets in the developing fibers of Gossypium barbadense