CoNCRAtlas


CoNCRAtlas ID CoMIRGB094
Mature miRNA sequence AAGCUCAGGAGGGAUAGCGCC
Locus D09:43374710-43374783(+)
Alignment 
Displayed Location: CM018223.1:43374692-43374803 Strand: +
UAAGUAUAGAAGAAUCUGUUAAGCUCAGGAGGGAUAGCGCCAUGGAUGAUCUUCAGCCUGAUCCUCAUUAGCGCUAUCCAUCCUGAGUUACAUGGCUUCUUCUUGCUCUUGC
).((((.(((((((.((((..(((((((((.(((((((((.(..((.((((........)))).))..).))))))))).)))))))))..)))).)))))))))))...((
....................AAGCUCAGGAGGGAUAGCGCC....................................................................... gba-miR390c
.......................................................................CGCUAUCCAUCCUGAGUUACA.................... gba-miR390c*
miRNA family miR390

Expression profile

Tissue specificity indexroot: 0.3392; shoot apical: 0.1099; fiber: 0.5208; all tissues: 0.03 | Tau: 0.77
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
D094337464643376582+CoLNCGB22007
Target lncRNA CoLNCGB09154, CoLNCGB07013, CoLNCGB07007, CoLNCGB12921, CoLNCGB07005, CoLNCGB12919, CoLNCGB12920, CoLNCGB07003, CoLNCGB07004, CoLNCGB26028
Target CDS GB_A11G3363, GB_A10G1523, GB_D10G1439, GB_A11G2790, GB_D11G2775, GB_A11G3544, GB_A08G2566, GB_A11G2902, GB_A11G2790, GB_D11G2775
sORF
Reference
PMID Title
0NA