| CoNCRAtlas ID | CoMIRGB092 |
|---|---|
| Mature miRNA sequence | UUGACAGAAGAUAGAGAGCAC |
| Locus | D09:23151189-23151301(+) |
| Alignment | Displayed Location: CM018223.1:23151176-23151310 Strand: + GAGGCAAUUGGUGAUUGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGGUGUGUAAUUAGGAGUCUUGAAGCAAUGCAUCCCACUCCUUUGUGCUCUUUAUGCUUCUGUCAUCACCUUCAAGCCACUCUUACCU (((((....(((((.......(((((((((((((((((((((((.(((((.(((((.(((((...))))).....))))).))).)).)))))))))))))).)))))))))))))).....)))..))))..)) ....................UUGACAGAAGAUAGAGAGCAC.............................................................................................. gba-miR157c .............................................................................................GCUCUUUAUGCUUCUGUCAUCA.................... gba-miR157c* |
| miRNA family | miR157 |
Expression profile
| Tissue specificity index | Ovule: 0.0003; root: 0.4914; shoot apical: 0.4643; fiber: 0.0406; all tissues: 0.0034 | Tau: 0.7412 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGB22348, CoLNCGB23736, CoLNCGB23735, CoLNCGB23734, CoLNCGB23733, CoLNCGB07097, CoLNCGB23283, CoLNCGB07096, CoLNCGB19497, CoLNCGB19496 |
|---|
| Target CDS | GB_D01G1853, GB_A03G1534, GB_D02G1688, GB_A01G1756, GB_D04G2127, GB_A04G1736, GB_A11G3648, GB_D11G3672, GB_D01G1531, GB_D04G1004 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25131375 | Small RNA and degradome profiling reveals a role for miRNAs and their targets in the developing fibers of Gossypium barbadense |