CoNCRAtlas



CoNCRAtlas ID CoMIRGB085
Mature miRNA sequence UGCCUGGCUCCCUGAAUGCCA
Locus D07:49785460-49785557(-)
Alignment
Displayed Location: CM018221.1:49785442-49785576 Strand: -
AUGAAACAAUGGAAAUGAUCUGCCUGGCUCCCUGAAUGCCAACUAUGGAUGGUGUCAAAUAAGCGGUGUUCUGUUGUUGGCCCUUUCCUAGUUGGCAUCAGAGGACUCAGGCAGGUCUAUCCUUUUUAUCAUCUU
((((......(((...(((((((((((.(((((((.(((((((((.(((.((.(((((...(((((....))))).)))))))..)))))))))))))))).))).)))))))))))..)))......)))))))
....................UGCCUGGCUCCCUGAAUGCCA.............................................................................................. gba-miR160
..............................................................................................GCAUCAGAGGACUCAGGCAGG.................... gba-miR160*
miRNA family miR160

Expression profile

Tissue specificity indexOvule: 0.0672; root: 0.542; shoot apical: 0.1587; fiber: 0.1414; all tissues: 0.0908 | Tau: 0.7887
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB16291, CoLNCGB16292, CoLNCGB27674, CoLNCGB24928, CoLNCGB24927, CoLNCGB24991, CoLNCGB13862, CoLNCGB21978, CoLNCGB15137, CoLNCGB24568
Target CDS GB_A06G0448, GB_D06G0443, GB_A05G2344, GB_D05G2351, GB_A03G0417, GB_D03G1573, GB_D05G1032, GB_A05G1057, GB_A05G4421, GB_D04G0050
sORF
Reference
PMID Title
31620865Analysis of the MIR160 gene family and the role of MIR160a_A05 in regulating fiber length in cotton