CoNCRAtlas


CoNCRAtlas ID CoMIRGB075
Mature miRNA sequence GUGUUUCGCGCGUGGACGACG
Locus D04:5365900-5365985(-)
Alignment 
Displayed Location: CM018218.1:5365893-5366005 Strand: -
AAAUGACUGCUGAAUUUUUGUUGUCCACGCGCGACACGCACUGCAUUUGUGUUUUUUCAAAGCUUUGCAUGUGUGUUUCGCGCGUGGACGACGUAAAUUAACAAGUCAUUAUA
.(((((((....(((((.((((((((((((((((.((((((((((.....(((((...)))))..)))).)))))).)))))))))))))))).)))))....)))))))...
........................................................................GUGUUUCGCGCGUGGACGACG.................... gba-miR1535
....................UUGUCCACGCGCGACACGCAC........................................................................ gba-miR1535*
miRNA family miR1535

Expression profile

Tissue specificity indexOvule: 0.0116; root: 0.0763; shoot apical: 0.728; fiber: 0.0183; all tissues: 0.1658 | Tau: 0.9066
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
D0453652645366234-CoLNCGB15166
D0453654595366234-CoLNCGB15167
D0453655085366234-CoLNCGB15168
Target lncRNA CoLNCGB14290, CoLNCGB15166, CoLNCGB15167, CoLNCGB15168, CoLNCGB25976, CoLNCGB01482, CoLNCGB01483, CoLNCGB15166, CoLNCGB15167, CoLNCGB15168
Target CDS GB_D01G0467, GB_A11G1053, GB_D11G1083, GB_D07G1477, GB_A07G1460, GB_A08G1561, GB_D08G1570, GB_D12G1381, GB_A12G1383, GB_A07G2319
sORF
Reference
PMID Title
0NA