CoNCRAtlas


CoNCRAtlas ID CoMIRGB059
Mature miRNA sequence UUGGACAGAGUAAUCACGGUCG
Locus D02:4750449-4750546(-)
Alignment 
Displayed Location: CM018216.1:4750431-4750561 Strand: -
UUCAGAUCCGGUCCAUUUGCUUGGACAGAGUAAUCACGGUCGAUUAAAUACUCUUAAUUCUGUUUAGCACAACAGGUUUCGUUUAAAUCAAUCGUGUUACUCCGUCCAAACAGAUGUUUUGGAUCAUCGAA
((..(((((((..((((((.((((((.((((((.((((((.((((....((.......((((((......))))))....))...)))).)))))))))))).)))))).))))))..)))))))...)))
....................UUGGACAGAGUAAUCACGGUCG......................................................................................... gba-miR3954b
..........................................................................................AUCGUGUUACUCCGUCCAAAC.................... gba-miR3954b*
miRNA family miR3954

Expression profile

Tissue specificity indexOvule: 0.0011; root: 0.5187; shoot apical: 0.3258; fiber: 0.1543; all tissues: 0.0002 | Tau: 0.768

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB12689, CoLNCGB12688, CoLNCGB12687, CoLNCGB13414, CoLNCGB22194, CoLNCGB22195, CoLNCGB12283, CoLNCGB09190, CoLNCGB09189, CoLNCGB03454
Target CDS GB_A02G0102, GB_D02G0120, GB_D02G0121, GB_D02G0122, GB_D02G0123, GB_A02G0676, GB_A02G1817, GB_D03G0268, GB_D10G1053, GB_D12G0794
sORF
Reference
PMID Title
No references available