CoNCRAtlas


CoNCRAtlas ID CoMIRGB058
Mature miRNA sequence UGUGUUCUCAGGUCGCCCCUG
Locus D02:1648761-1648840(+)
Alignment 
Displayed Location: CM018216.1:1648742-1648855 Strand: +
AGAGGUGGAGGAAUCCGACUGGGUCGACCUUAGAACACGUGAUUGUUUUUUGAUUUCGAUAUGGUUCGUUUCAUGUGUUCUCAGGUCGCCCCUGUCGGGUUUCCUUUCAUCAUU
(((((.(((((((((((((.(((.((((((.(((((((((((..............(((......)))..))))))))))).)))))).))).))))))))))(((((((.(((
.........................................................................UGUGUUCUCAGGUCGCCCCUG.................... gba-miR398b
....................GGGUCGACCUUAGAACACGUG......................................................................... gba-miR398b*
miRNA family miR398

Expression profile

Tissue specificity indexOvule: 0.2759; root: 0.165; shoot apical: 0.0016; fiber: 0.1588; all tissues: 0.3987 | Tau: 0.6229
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB07880, CoLNCGB07881, CoLNCGB19931, CoLNCGB25815, CoLNCGB25816, CoLNCGB25817, CoLNCGB07880, CoLNCGB07881, CoLNCGB27351, CoLNCGB04559
Target CDS GB_A11G2607, GB_D11G2621, GB_D12G2275, GB_D05G0411, GB_A05G2811, GB_D05G2803, GB_A03G1596, GB_D02G1757, GB_A06G1240, GB_A06G1241
sORF
Reference
PMID Title
0NA