| CoNCRAtlas ID | CoMIRGB057 |
|---|---|
| Mature miRNA sequence | AAGCUCAGGAGGGAUAGCGCC |
| Locus | D01:62547034-62547154(+) |
| Alignment | Displayed Location: CM018215.1:62547037-62547174 Strand: + CCAGUAUGGAAGAAUCUGUUAAGCUCAGGAGGGAUAGCGCCAUGGAUGAUCCAUCUUUCAAGCUUUCAUGCAUGUAUGUUAUUUGAUCCUCAUAUAGCGCUAUCCAUCCUGAGUUUCAUCGGUUCUUCUUGCUUGCUG ..((((.(((((((((.((.((((((((((.(((((((((.(((((.((((.......((.((......)).))..........)))).)).))).))))))))).)))))))))).)).))))))))))))).(((( ....................AAGCUCAGGAGGGAUAGCGCC................................................................................................. gba-miR390b .................................................................................................CGCUAUCCAUCCUGAGUUUCA.................... gba-miR390b* |
| miRNA family | miR390 |
Expression profile
| Tissue specificity index | Ovule: 0.0105; root: 0.0157; shoot apical: 0.0018; fiber: 0.3585; all tissues: 0.6135 | Tau: 0.8425 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGB20849, CoLNCGB20850, CoLNCGB05216, CoLNCGB05215, CoLNCGB09154, CoLNCGB05214, CoLNCGB07013, CoLNCGB07007, CoLNCGB12921, CoLNCGB07005 |
|---|
| Target CDS | GB_A11G3363, GB_A10G1523, GB_D10G1439, GB_A11G2790, GB_D11G2775, GB_A11G3544, GB_A08G2566, GB_A11G2902, GB_A11G2790, GB_D11G2775 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |