| CoNCRAtlas ID | CoMIRGB052 |
|---|---|
| Mature miRNA sequence | UGAAUCUUGAUGAUGCUGCAU |
| Locus | A13:107561765-107561852(-) |
| Alignment | Displayed Location: CM018214.1:107561747-107561872 Strand: - UACAGUCAGUGUUUGCAAAUGCGGCAUCGUCAAGAUUCAUAGAAAAUUUUCCUAAGAGCCUGUUUGGAUGCCUUGAAAGUUUUCUUGAAUCUUGAUGAUGCUGCAUCUGCAAUUAUAUUGGCUAAC ...((((((((((((((.(((((((((((((((((((((.(((((((((((.......((.....)).......)))))))))))))))))))))))))))))))).)))))..)))))))))... .....................................................................................UGAAUCUUGAUGAUGCUGCAU.................... gba-miR172b ....................GCGGCAUCGUCAAGAUUCAUA..................................................................................... gba-miR172b* |
| miRNA family | miR172 |
Expression profile
| Tissue specificity index | root: 0.7573; shoot apical: 0.24; all tissues: 0.0027 | Tau: 0.9199 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGB00433, CoLNCGB00434, CoLNCGB00436, CoLNCGB29473, CoLNCGB18259, CoLNCGB18258, CoLNCGB18257, CoLNCGB29472, CoLNCGB18254, CoLNCGB18250 |
|---|
| Target CDS | GB_D03G1543, GB_D05G0997, GB_A05G1021, GB_A08G2997, GB_D08G0016, GB_A10G2447, GB_D10G2402, GB_A01G2449, GB_D01G2522, GB_A03G0446 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25131375 | Small RNA and degradome profiling reveals a role for miRNAs and their targets in the developing fibers of Gossypium barbadense |