CoNCRAtlas


CoNCRAtlas ID CoMIRGB047
Mature miRNA sequence UCCAAAGGGAUCGCAUUGAUCU
Locus A12:97805130-97805316(+)
Alignment 
Displayed Location: CM018213.1:97805115-97805275 Strand: +
UCCUAGUGCAGGUGGAGAGCUCCAAAGGGAUCGCAUUGAUCUAAUGUUGAUGAUGGGCUUCCUUGAAAACCUUAACGAAUUAAUUAUUGAUUUUUGUUGAUUCAGUUCAGUACCCAUUGGAUCAUGCGAUCCCUUCGGAAUUUUCCAUCGCUAGCUCUAAA
...))).)).(((((((((.(((.((((((((((((.(((((((((....(((.((..(((...)))..)).....((((((((...........))))))))...))).....))))))))))))))))))))).))).)))))))))(((((((.....
....................UCCAAAGGGAUCGCAUUGAUCU....................................................................................................................... gba-miR393
........................................................................................................................AUCAUGCGAUCCCUUCGGAAU.................... gba-miR393*
miRNA family miR393

Expression profile

Tissue specificity indexOvule: 0.2837; root: 0.0057; shoot apical: 0.0022; fiber: 0.1258; all tissues: 0.5826 | Tau: 0.8209
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
A129780486497808104+CoLNCGB10520
A129780493197808104+CoLNCGB10521
A129780495197808104+CoLNCGB10522
Target lncRNA CoLNCGB10908, CoLNCGB10909, CoLNCGB11322, CoLNCGB11321, CoLNCGB11320, CoLNCGB11318, CoLNCGB11319, CoLNCGB23508, CoLNCGB06801, CoLNCGB06803
Target CDS GB_A11G0673, GB_D07G2668, GB_D11G0688, GB_A07G2692, GB_A08G0808, GB_A08G1465, GB_D08G0808, GB_D08G1467, GB_D11G1268, GB_A11G1232
sORF
Reference
Fatal error: Uncaught ValueError: array_combine(): Argument #1 ($keys) and argument #2 ($values) must have the same number of elements in /var/www/html/CoNCRAtlas/details_mirna.php:156 Stack trace: #0 /var/www/html/CoNCRAtlas/details_mirna.php(156): array_combine(Array, Array) #1 {main} thrown in /var/www/html/CoNCRAtlas/details_mirna.php on line 156
PMID Title