| CoNCRAtlas ID | CoMIRGB047 |
|---|---|
| Mature miRNA sequence | UCCAAAGGGAUCGCAUUGAUCU |
| Locus | A12:97805130-97805316(+) |
| Alignment | Displayed Location: CM018213.1:97805115-97805275 Strand: + UCCUAGUGCAGGUGGAGAGCUCCAAAGGGAUCGCAUUGAUCUAAUGUUGAUGAUGGGCUUCCUUGAAAACCUUAACGAAUUAAUUAUUGAUUUUUGUUGAUUCAGUUCAGUACCCAUUGGAUCAUGCGAUCCCUUCGGAAUUUUCCAUCGCUAGCUCUAAA ...))).)).(((((((((.(((.((((((((((((.(((((((((....(((.((..(((...)))..)).....((((((((...........))))))))...))).....))))))))))))))))))))).))).)))))))))(((((((..... ....................UCCAAAGGGAUCGCAUUGAUCU....................................................................................................................... gba-miR393 ........................................................................................................................AUCAUGCGAUCCCUUCGGAAU.................... gba-miR393* |
| miRNA family | miR393 |
Expression profile
| Tissue specificity index | Ovule: 0.2837; root: 0.0057; shoot apical: 0.0022; fiber: 0.1258; all tissues: 0.5826 | Tau: 0.8209 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGB10908, CoLNCGB10909, CoLNCGB11322, CoLNCGB11321, CoLNCGB11320, CoLNCGB11318, CoLNCGB11319, CoLNCGB23508, CoLNCGB06801, CoLNCGB06803 |
|---|
| Target CDS | GB_A11G0673, GB_D07G2668, GB_D11G0688, GB_A07G2692, GB_A08G0808, GB_A08G1465, GB_D08G0808, GB_D08G1467, GB_D11G1268, GB_A11G1232 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 26133244 | Identification of miRNAs and Their Targets in Cotton Inoculated with Verticillium dahliae by High-Throughput Sequencing and Degradome Analysis |