CoNCRAtlas


CoNCRAtlas ID CoMIRGB046
Mature miRNA sequence ACUCUCCCUCAAGGGCUUCUG
Locus A12:95977735-95977814(+)
Alignment 
Displayed Location: CM018213.1:95977717-95977827 Strand: +
UGGGAUGGAAAUCAUUGCUCACUCUCCCUCAAGGGCUUCUGAAUUUGCCUGUGUUUAAGGGCUUAAACUGAAGCGCUCGAGGGUAGAGUGGAUAAUGUUCACCAUUCUUUC
.(((((((....(((((.((((((((((((.((.(((((.......((((........)))).......))))).)).))))).))))))).)))))....)))))))..(
....................ACUCUCCCUCAAGGGCUUCUG...................................................................... gba-miR477b
.....................................................................GAAGCGCUCGAGGGUAGAGUGG.................... gba-miR477b*
miRNA family miR477

Expression profile

Tissue specificity indexOvule: 0.2402; root: 0.1031; shoot apical: 0.2736; fiber: 0.2764; all tissues: 0.1068 | Tau: 0.3455
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
A129597757995980168-CoLNCGB10457
A129597757995980168-CoLNCGB10458
Target lncRNA CoLNCGB10457, CoLNCGB10458, CoLNCGB10457, CoLNCGB10458, CoLNCGB11896, CoLNCGB24539, CoLNCGB24540, CoLNCGB24541, CoLNCGB09233, CoLNCGB09234
Target CDS GB_D09G2605, GB_A09G2771, GB_A01G1629, GB_D01G1791, GB_A01G2263, GB_D01G2349, GB_D02G0800, GB_A08G1325, GB_D08G1350, GB_A05G3761
sORF
Reference
PMID Title
0NA