CoNCRAtlas


CoNCRAtlas ID CoMIRGB045
Mature miRNA sequence UCCAGAAGCAGAGUUAGGACA
Locus A12:93976861-93976970(+)
Alignment 
Displayed Location: CM018213.1:93976843-93976989 Strand: +
ACCAGUGGAAUAAAAAAAAUUCCAGAAGCAGAGUUAGGACAUUGACAUGUGUCCUUUUUAUUAUUUUUAAAAACUUUUAAAUUUAUUUUAGGGGCACAUGCUAAUGUCCUGAACCUGCUUGUGGAAUAUUUGUAUUCCACUGGCAGU
.(((((((((((..(((.((((((.((((((..(((((((((((.(((((((((((.....((..((((((....))))))..))....))))))))))).)))))))))))..)))))).)))))).))).)))))))))))..))
....................UCCAGAAGCAGAGUUAGGACA.......................................................................................................... gba-miRN3
..........................................................................................................UCCUGAACCUGCUUGUGGAAU.................... gba-miRN3*
miRNA family miRN3

Expression profile

Tissue specificity indexOvule: 0.0199; root: 0.6367; shoot apical: 0.2988; fiber: 0.0171; all tissues: 0.0275 | Tau: 0.8574

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB07454, CoLNCGB07455, CoLNCGB26619, CoLNCGB26618, CoLNCGB26617, CoLNCGB27744, CoLNCGB27743, CoLNCGB27741, CoLNCGB27736, CoLNCGB00795
Target CDS GB_D02G0065, GB_D09G1840, GB_A09G1993, GB_A08G2781, GB_D08G2767, GB_A10G0771, GB_A12G3055, GB_D12G3064, GB_D10G0812, GB_A03G2328
sORF
Reference
PMID Title
No references available