CoNCRAtlas


CoNCRAtlas ID CoMIRGB038
Mature miRNA sequence UGGAAAUCUUUGGGGAGAGUGA
Locus A11:2099559-2099820(+)
Alignment 
Displayed Location: CM018212.1:2099540-2099653 Strand: +
UUACAAGGCAUUGGUUCCUCACUCUCCCUCAAGGGCUUCCUGCAAUGCCUCCGAAUACUGCCCUGGCAAUGCUGGAAAUCUUUGGGGAGAGUGAAAAAAAACUUGCCUUGCUAA
...(((((((..((((..((((((((((.((((((.((((.(((.((((...............)))).))).)))).)))))))))))))))).....)))))))))))....
........................................................................UGGAAAUCUUUGGGGAGAGUGA.................... gba-miR1396a
....................ACUCUCCCUCAAGGGCUUCCUGC....................................................................... gba-miR1396a*
miRNA family miR1396

Expression profile

Tissue specificity indexOvule: 0.0372; root: 0.4993; shoot apical: 0.1863; fiber: 0.2245; all tissues: 0.0527 | Tau: 0.7493

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB10457, CoLNCGB10458, CoLNCGB24141, CoLNCGB24140, CoLNCGB24139, CoLNCGB21809, CoLNCGB21808, CoLNCGB27185, CoLNCGB27186, CoLNCGB27187
Target CDS GB_D09G2605, GB_A09G2771, GB_D04G1100, GB_A02G1713, GB_A05G2731, GB_D05G2723, GB_A10G1960, GB_D10G1949, GB_A05G3120, GB_A02G0461
sORF
Reference
PMID Title
No references available