CoNCRAtlas


CoNCRAtlas ID CoMIRGB032
Mature miRNA sequence AAGCUCAGGAGGGAUAGCGCC
Locus A09:69312748-69312830(+)
Alignment 
Displayed Location: CM018210.1:69312739-69312850 Strand: +
UAAGUAUAGAAGAAUCUGUUAAGCUCAGGAGGGAUAGCGCCAUGGAUGAUCUUCAGCCUGAUCCUCAUUAGCGCUAUCUAUCCUGAGUUACAUGGCUUCUUCUUGCUCUUGC
..((((.(((((((.((((..(((((((((.(((((((((.(..((.((((........)))).))..).))))))))).)))))))))..)))).)))))))))))...((
....................AAGCUCAGGAGGGAUAGCGCC....................................................................... gba-miR390a
.......................................................................CGCUAUCUAUCCUGAGUUACA.................... gba-miR390a*
miRNA family miR390

Expression profile

Tissue specificity indexOvule: 0.6217; shoot apical: 0.1414; fiber: 0.2368 | Tau: 0.8479
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
A096931254269313568+CoLNCGB06137
Target lncRNA CoLNCGB09154, CoLNCGB07013, CoLNCGB07007, CoLNCGB12921, CoLNCGB07005, CoLNCGB12919, CoLNCGB12920, CoLNCGB07003, CoLNCGB07004, CoLNCGB26028
Target CDS GB_A11G3363, GB_A10G1523, GB_D10G1439, GB_A11G2790, GB_D11G2775, GB_A11G3544, GB_A08G2566, GB_A11G2902, GB_A11G2790, GB_D11G2775
sORF
Reference
PMID Title
0NA