CoNCRAtlas


CoNCRAtlas ID CoMIRGB027
Mature miRNA sequence UUGACAGAAGAUAGAGAGCAC
Locus A09:40494591-40494744(+)
Alignment 
Displayed Location: CM018210.1:40494629-40494763 Strand: +
GAGGCAACAGGUGAUUGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGGUGUGCAAUUAGGAGUCUUGAAGCAAUGCAUCCCACUCCUUUGUGCUCUCUAUGCUUCUGUCAUCACCUUCAAGCCACUCUUACCU
(((((...((((((.......(((((((((((((((((((((((.(((((.(((((.(((((...))))).....))))).))).)).)))))))))))))).)))))))))))))))....)))..))))..))
....................UUGACAGAAGAUAGAGAGCAC.............................................................................................. gba-miR157b
.............................................................................................GCUCUCUAUGCUUCUGUCAUCA.................... gba-miR157b*
miRNA family miR157

Expression profile

Tissue specificity indexshoot apical: 1.0 | Tau: 1.0
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB22348, CoLNCGB23736, CoLNCGB23735, CoLNCGB23734, CoLNCGB23733, CoLNCGB07097, CoLNCGB23283, CoLNCGB07096, CoLNCGB19497, CoLNCGB19496
Target CDS GB_D01G1853, GB_A03G1534, GB_D02G1688, GB_A01G1756, GB_D04G2127, GB_A04G1736, GB_A11G3648, GB_D11G3672, GB_D01G1531, GB_D04G1004
sORF
Reference
PMID Title
25131375Small RNA and degradome profiling reveals a role for miRNAs and their targets in the developing fibers of Gossypium barbadense