CoNCRAtlas


CoNCRAtlas ID CoMIRGB023
Mature miRNA sequence UUGAGCCGCGCCAAUAUCACU
Locus A07:4832844-4832927(+)
Alignment 
Displayed Location: CM018208.1:4832828-4832946 Strand: +
UUAGGAAGCAAAAAUAAAAGCGAUGUUGGUGCGGUUCAAUCCGAAAACGAAUUUACAAUCGUAAAAUACGAUAUCAGAUUGAGCCGCGCCAAUAUCACUUUCCGCAAGUCUCCAAAUUU
((((((((((((....((((.((((((((((((((((((((.((...(((.(((((....))))).).))...)).)))))))))))))))))))).))))...............)))
..............................................................................UUGAGCCGCGCCAAUAUCACU.................... gba-miR171b
....................CGAUGUUGGUGCGGUUCAAUC.............................................................................. gba-miR171b*
miRNA family miR171

Expression profile

Tissue specificity indexroot: 0.7983; shoot apical: 0.1011; all tissues: 0.1007 | Tau: 0.9368
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB10413, CoLNCGB10412, CoLNCGB10411, CoLNCGB10410, CoLNCGB10409, CoLNCGB10408, CoLNCGB10407, CoLNCGB10406, CoLNCGB10405, CoLNCGB14907
Target CDS GB_A12G2500, GB_D12G2499, GB_A12G1158, GB_D12G1139, GB_A08G2079, GB_D08G2069, GB_A03G0141, GB_D03G1853, GB_A12G1159, GB_A06G0475
sORF
Reference
PMID Title
0NA