| CoNCRAtlas ID |
CoMIRGB021 |
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| Mature miRNA sequence |
UGACAACGAGAGAGAGCACGU |
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| Locus |
A07:14861408-14861498(+) |
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| Alignment |
Displayed Location: CM018208.1:14861394-14861513 Strand: +
AGAUAUGAUACAUUAUCAAUUGACAACGAGAGAGAGCACGUUUGUAGCCAUUCAUACAUGGUCAUGGAUGCAUACAAGCGUGCUCUCUAUCGUUGUCAUGUGAUUUGUACAUGUCUCUCC
(((((((.((((..((((..(((((((((.((((((((((((((((..(((((((........)))))))..)))))))))))))))).)))))))))..)))).)))))))))))....
....................UGACAACGAGAGAGAGCACGU............................................................................... gba-miR535a
...............................................................................GUGCUCUCUAUCGUUGUCAUG.................... gba-miR535a*
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| miRNA family |
miR535 |
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Expression profile
| Tissue specificity index | Ovule: 0.0228; root: 0.2309; shoot apical: 0.6673; fiber: 0.0323; all tissues: 0.0468 | Tau: 0.8753
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| Tissue |
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| Developmental Stage |
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| Treatment |
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Additional Information
Overlapping Elements:
| sORF |
>CoMIRGB021:43-90 ORF1_CoMIRGB021:42:89
ATGGTCATGGATGCATACAAGCGTGCTCTCTATCGTTGTCATGTGATT
>CoMIRGB021:5-88 ORF2_CoMIRGB021:4:87
TTGACAACGAGAGAGAGCACGTTTGTAGCCATTCATACATGGTCATGGATGCATACAAGCGTGCTCTCTA
TCGTTGTCATGTGA
>CoMIRGB021:c84-37 ORF3_CoMIRGB021:83:36
ATGACAACGATAGAGAGCACGCTTGTATGCATCCATGACCATGTATGA
>CoMIRGB021:c36-1 ORF4_CoMIRGB021:35:0
ATGGCTACAAACGTGCTCTCTCTCGTTGTCAATTGA
>CoMIRGB021:c62-3 ORF5_CoMIRGB021:61:2
TTGTATGCATCCATGACCATGTATGAATGGCTACAAACGTGCTCTCTCTCGTTGTCAATT
>CoMIRGB021:c40-2 ORF6_CoMIRGB021:39:1
ATGAATGGCTACAAACGTGCTCTCTCTCGTTGTCAATTG
>ORF1_CoMIRGB021:42:89 unnamed protein product, partial
MVMDAYKRALYRCHVI
>ORF2_CoMIRGB021:4:87 unnamed protein product
MTTRESTFVAIHTWSWMHTSVLSIVVM
>ORF3_CoMIRGB021:83:36 unnamed protein product
MTTIESTLVCIHDHV
>ORF4_CoMIRGB021:35:0 unnamed protein product
MATNVLSLVVN
>ORF5_CoMIRGB021:61:2 unnamed protein product, partial
MYASMTMYEWLQTCSLSLSI
>ORF6_CoMIRGB021:39:1 unnamed protein product, partial
MNGYKRALSRCQL
Check Peptide activity
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