CoNCRAtlas ID |
CoMIRGB018 |
Mature miRNA sequence |
AAGGGAAAGACUAGAUUCAUA |
Locus |
A06:111997024-111997113(-) |
Alignment |
Displayed Location: CM018207.1:111997007-111997132 Strand: -
UAUGCACUUUAAUUGGCUUAUGAAUCUAGUUUCUCUCUUACUCCAUUAUCAUAUUUUCCUUGUGAAAAUAUGUCUUCAAGAGAGUAAGGGAAAGACUAGAUUCAUAACCCAACAUAAGUGAUCAAC
))))(((((...((((.(((((((((((((((.(((((((((((.....(((((((((.....))))))))).......).)))))))))).))))))))))))))).))))...)))))......
.....................................................................................AAGGGAAAGACUAGAUUCAUA.................... gba-miR1386b
....................UGAAUCUAGUUUCUCUCUUAC..................................................................................... gba-miR1386b*
|
miRNA family |
miR1386 |
Expression profile
Tissue specificity index | root: 0.9794; shoot apical: 0.0203; all tissues: 0.0002 | Tau: 0.9948
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Tissue |
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Developmental Stage |
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Treatment |
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Additional Information
Overlapping Elements:
sORF |
>CoMIRGB018:30-71 ORF1_CoMIRGB018:29:70
TTGAAGACATATTTTCACAAGGAAAATATGATAATGGAGTAA
>CoMIRGB018:c89-3 ORF2_CoMIRGB018:88:2
ATGAATCTAGTTTCTCTCTTACTCCATTATCATATTTTCCTTGTGAAAATATGTCTTCAAGAGAGTAAGG
GAAAGACTAGATTCATA
>ORF1_CoMIRGB018:29:70 unnamed protein product
MKTYFHKENMIME
>ORF2_CoMIRGB018:88:2 unnamed protein product, partial
MNLVSLLLHYHIFLVKICLQESKGKTRFI
Check Peptide activity
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