CoNCRAtlas


CoNCRAtlas ID CoMIRGB013
Mature miRNA sequence UCAUUGAGUGCAGCGUUGAUG
Locus A05:16020602-16020672(-)
Alignment 
Displayed Location: CM018206.1:16020583-16020692 Strand: -
AUCCCCGGAUGGAAGAAACAUCAUUGAGUGCAGCGUUGAUGAAAUUUCUCAAUUUCUGAGAUGAAUUCGUCAGCGCUGCUCUCAAUCAUGUUUUUUUCCUUUCGAGAACA
.....((((.(((((((((((.((((((.((((((((((((((...(((((.....)))))....)))))))))))))).)))))).))).)))))))).))))......
....................UCAUUGAGUGCAGCGUUGAUG..................................................................... gba-miR397
.....................................................................UCAGCGCUGCUCUCAAUCAUG.................... gba-miR397*
miRNA family miR397

Expression profile

Tissue specificity indexOvule: 0.0586; root: 0.3532; shoot apical: 0.0452; fiber: 0.5344; all tissues: 0.0086 | Tau: 0.7822
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
A051601957616020897-CoLNCGB00606
A051602006116020897-CoLNCGB00607
Target lncRNA CoLNCGB27643, CoLNCGB28291, CoLNCGB02931, CoLNCGB02932, CoLNCGB19908, CoLNCGB19909, CoLNCGB28290, CoLNCGB28289, CoLNCGB28288, CoLNCGB19907
Target CDS GB_A04G1122, GB_D04G1501, GB_A13G0263, GB_D13G0251, GB_D03G1082, GB_A03G0788, GB_D03G1425, GB_D03G1426, GB_A13G2702, GB_D13G2636
sORF
Reference
PMID Title
0NA