| CoNCRAtlas ID | CoMIRGB012 |
|---|---|
| Mature miRNA sequence | CCAAAAUGGACUUAGUUGCUA |
| Locus | A04:80576342-80576523(+) |
| Alignment | Displayed Location: CM018205.1:80576369-80576539 Strand: + UACUUUGGUACCUAAACUUGGCAACUAUGUCCAUUUUGGUCCCUAAACUUGGUAAAUGUGAAAGUUUGAUAAUGUGGUAUUUUGAGAUUGUGCUGCAUAAUUAAAUCUUGAUGGAAUCCAAGUUCAGAGACCAAAAUGGACUUAGUUGCUAAGUUUAGCUACCUAAGUGGA (((((((((((((((((((((((((((.(((((((((((((.((.(((((((....(((.((.(((((((.(((((((((.........))))))))).))))))).)).)))....))))))).)).))))))))))))).))))))))))))))).((((....)))). ..................................................................................................................................CCAAAAUGGACUUAGUUGCUA.................... gba-miRN1 ....................GCAACUAUGUCCAUUUUGGUC.................................................................................................................................. gba-miRN1* |
| miRNA family | miRN1 |
Expression profile
| Tissue specificity index | Ovule: 0.2607; root: 0.2265; shoot apical: 0.0706; fiber: 0.1395; all tissues: 0.3027 | Tau: 0.424 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGB18426, CoLNCGB18425, CoLNCGB18424, CoLNCGB18423, CoLNCGB18422, CoLNCGB18421, CoLNCGB18420, CoLNCGB27388, CoLNCGB27387, CoLNCGB15112 |
|---|
| Target CDS | GB_A08G0199, GB_A08G0198, GB_D08G0200, GB_A13G2252, GB_D04G0225, GB_A13G2305, GB_D13G2252, GB_D02G0683, GB_A13G1171, GB_D13G1000 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |