| CoNCRAtlas ID | CoMIRGB002 |
|---|---|
| Mature miRNA sequence | UUGGACAGAGUAAUCACGGUCG |
| Locus | A02:4082901-4083019(-) |
| Alignment | Displayed Location: CM018203.1:4082884-4083014 Strand: - UUCAGAUCCGGUCCAUUUGCUUGGACAGAGUAAUCACGGUCGAUUAAAUACUCUUAAUUCUGUUUAGCAAAACAGGUUUCGUUUAAAUCAAUCGUGUUACUCUGUCCAAACAGAUGUUUUGGAUCAUCGAA ....(((((((..((((((.(((((((((((((.((((((.((((....((.......(((((((....)))))))....))...)))).))))))))))))))))))).))))))..)))))))...((( ....................UUGGACAGAGUAAUCACGGUCG......................................................................................... gba-miR3954a ..........................................................................................AUCGUGUUACUCUGUCCAAAC.................... gba-miR3954a* |
| miRNA family | miR3954 |
Expression profile
| Tissue specificity index | Ovule: 0.0016; root: 0.6042; shoot apical: 0.3201; fiber: 0.073; all tissues: 0.0011 | Tau: 0.8362 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGB12689, CoLNCGB12688, CoLNCGB12687, CoLNCGB13414, CoLNCGB22194, CoLNCGB22195, CoLNCGB23296, CoLNCGB23297, CoLNCGB27700, CoLNCGB27699 |
|---|
| Target CDS | GB_A02G0102, GB_D02G0120, GB_D02G0121, GB_D02G0122, GB_D02G0123, GB_A02G0676, GB_A02G1817, GB_D03G0268, GB_D10G1053, GB_D12G0794 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |