Peptide Sequence:>ORF1_CoMIRGH213:2:88 unnamed protein product, partial
LKGVRTAVAVSSFMEIQLLPFLQNPPAWW
>ORF2_CoMIRGH213:52:2 unnamed protein product, partial
MYLHERTYSYCRSYTLQ
>ORF3_CoMIRGH213:42:1 unnamed protein product, partial
MNELTATAVLTPFS
>ORF4_CoMIRGH213:83:39 unnamed protein product
MLEGFVRTVVAVSP
PlantPepDB Database:Database: PPepDB
3,848 sequences; 236,108 total residues
Date: Dec 23, 2019 9:34 PM Longest sequence: 255 residues
BLASTDB Version: 4
Volumes:
/var/www/html/PlantPepDB/Blastdb/PPepDB
Running BLAST search against PlantPepDB...
Command: /usr/bin/blastp -query outputs/mirna/ORF-PEP-3110.out -db /var/www/html/PlantPepDB/Blastdb/PPepDB -evalue 10 -out outputs/mirna/ORF-PEP-3110.out.out.txt -outfmt '6 qseqid sseqid pident length mismatch gapopen qstart qend sstart send evalue bitscore' 2>&1
BLAST search completed!
Summary of Hits
| # | Subject ID | Identity (%) | Alignment Length | E-value | Bit Score |
|---|
| 1 | PPepDB_945 | 47.06% | 17 aa | 7.50e+0 | 17.3 |
| 2 | PPepDB_596 | 50.00% | 14 aa | 8.30e+0 | 17.3 |
| 3 | PPepDB_1653 | 50.00% | 10 aa | 4.40e+0 | 16.9 |