rRNA

rsRNAfinder Toolkit

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Frequently Asked Questions

1. Error while loading shared libraries: libncurses.so.5: cannot open shared object file

    sudo ln -s /usr/lib64/libncurses.so.6 /usr/lib64/libncurses.so.5

2. IncompleteFilesException: The files below seem to be incomplete

    snakemake --cores 8 -q --ri

3. Automate removal of SAM file

    Change"intermediate/SAM/{name}/{dir}/{sample}/{sample}_trimmed.sam"to temp("intermediate/SAM/{name}/{dir}/{sample}   /{sample}_trimmed.sam") in rsRNAfinder/rules/default_smk/alignment_default.smk file