Home | PlantXBot

Welcome to PlantXBot


PlantXBot is a context-aware conversational framework that enables reliable natural language querying of biological databases by integrating deterministic NLP-to-SQL translation, semantic retrieval, and retrieval-augmented generation (RAG). Designed to overcome the limitations of complex schemas and rigid query interfaces, it features a flexible architecture that supports both direct querying of individual databases and coordinated searches across multiple domain-specific repositories through specialized conversational agents. By accurately translating user intent into database queries, PlantXBot streamlines data access, improves the efficiency and reliability of retrieval operations, and democratizes intuitive discovery in plant genomics and bioinformatics.

Specialized Database Chatbots

AtFusionBot

AtFusionBot

Query the Arabidopsis thaliana fusion transcript database.

PFusionBot

PFusionBot

Access the comprehensive plant-specific fusion transcripts database.

PtRFBot

PtRFBot

Explore the plant transfer RNA-derived fragments (PtRFdb) database.

PbtRFBot

PbtRFBot

Investigate tRFs in plants under various biotic stress conditions.

PtncRNABot

PtncRNABot

Query the plant tRNA-derived non-coding RNAs database.

AthIsomiRBot

AthIsomiRBot

Explore miRNA variants (isomiRs) in Arabidopsis thaliana.

AnninterBot

AnninterBot

Analyze annotation and interaction data for plant ncRNAs.

ALncBot

ALncBot

Discover antisense long non-coding RNAs in Arabidopsis.

PtRNABot

PtRNABot

Access and query the plant tRNA database for sequence information.

PVsiRNABot

PVsiRNABot

Explore virus-induced small interfering RNAs in plants.