45087_PtRNAdb chr-10.trna10-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 10 20188286 20188369 Leu CAA 0 0 78.5 55.10 23.40 Inf Leu 119.0 Phanerogamae -NA- Dicot GTCAGGGTGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.><.<<<...>>>>>.......<<<<<<<<<<<<. ttataaatttgtactgggatttttaatattaaccaaaaaatattaaatttacaatCAAATCAAGTAACCTATTGTAAAATGCTGTTTTAGCAAGCATTCA attttaatttgattttcattaaATATGACTCTGGCTCTCTTTTGTCAACAAgcccaaatttttaaaatgtggttcatttttctcaaaaagCCCAAAAGCG + 45088_PtRNAdb chr-10.trna11-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 11 20971031 20971102 Asp GTC 0 0 50.0 36.50 13.50 Inf Asp 77.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGAGGGTGaCCCGGGTTCGATCCTCGGTAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<....>>>>>.......<<<<<<<<<<<<. TGCTCTTAACTCTGCTGCTTCCTTGCCAAATAAGATGTCGTATTTGCCCGCGCCATTTTAActagattttaattttgatttttgaattagatATCATCAG attttgttattattatttttattcttttctcatACCTGCTGGTTAAacacattttatattttgtcaAATTCTATATAAACTCCTCCCAGCTTATTATAGA + 45089_PtRNAdb chr-10.trna13-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 13 21973147 21973218 Gly TCC 0 0 46.8 32.70 14.10 Inf Gly 63.3 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGAAATAGaCCCGGGTTCGACTCTAGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<....>>.>>.......<<.<<<<<<<<<. AGGTTTACAGTTATAGATGAAATATAGGGGGACTTCGAGAACAAAATATTTGCATTTTGttacaaaacaaatattttaattcagcGCCCATAATCAAACC TGgatattattttctgttttatttaaagAATTTCCTGGGTCATTGCTTCCTTTATGTTTTTCtatacatttttgtttttggagTAAACATTGAATacata + 45090_PtRNAdb chr-10.trna16-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 16 28957845 28957917 Met CAT 0 0 37.3 19.30 18.00 Inf Thr 47.5 IPD:-35.30 Phanerogamae -NA- Dicot ACATACTTAACTCAGCGGTtAGAGTATTGCTTTCATACAGTGGGAGtCATTGGTTCAAATCCAATAGTAGGTA 73 >>.>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. CGATTTGATTGGTATTGCTTAGAAGTAATATTGGATTTATAATCCATCGATTTAATAAGTccattttatttctctttatgATTCCTCTTGATAATAAATG GAACTTATTAAATACCATCGATCCCGATGTCTAATAACCTTCTTTATtgattttctatctttttcatCCTATTCTATTTccgttttcaattttcaaattt + 45091_PtRNAdb chr-10.trna17-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 17 29735034 29735121 Ser GCT 0 0 27.6 21.50 6.10 Inf Ser 33.5 Phanerogamae -NA- Dicot GCAGAGACGGTTGAGTGGActAAAGTGTCGGATTGCTAATCCGTTGTATGAGTTATTCATACTGAGGGTTTGAATCCCTCTCTTTCCA 88 >.>>>>>..>>>...........<<<..>>>>.......<<<<..>>>>>>>...<<<<<<<.>>>>>.......<<<<<<<<<<.<. GCAGGACTCTTGCATTGCTCATataacaaagtaaaaaatggctttttttcAAGCCTTTCTTTTTGCATGCTATAACATAGTAATTATCTTATCTCAATTA TTTCAGTTTTTGGTAGTGGAATAGATCAAATCCTAATACCATTTCTGAAAATGAAGCAAGGAACtctccttttttattctttgcGTCCAGGATTACGTCC + 45092_PtRNAdb chr-10.trna18-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 18 47816273 47816345 Arg ACG 0 0 72.0 49.70 22.30 Inf Arg 93.9 Phanerogamae -NA- Dicot GACTCCGTGGCCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGCGGAGTCG 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. taataaatgttataattaaaatttaataggtGTAAAAAGAATTTTTCATTCCTTTAACTGTACAGTTTTAGTAAAATGTTTTAGGCATTCAAAAGCAGTT ATTGTCACaaatttttcatttcctttttgcAGAATTGGGTTTTTGAGTTGTACGGAGCTGTGTTTGTTGGGCATGATGGAGGATTCCGTTAGCGACTCCA + 45093_PtRNAdb chr-10.trna19-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 19 48994098 48994170 Lys TTT 0 0 89.6 66.00 23.60 Inf Lys 96.4 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttttatatcggatatcaaattagtttttattctttgaaattgtgaaatttaccataataatatacattaattaaaaataaattacttttataGCCAATGA aaaattttataatttttcagtTTTCCCTTTTACTTCCTCCACGAGAGAGAAAGATTATGCTCGTGTTCCAGTGCAATGCATAAGCATCTTATCTCTGTGC + 45094_PtRNAdb chr-10.trna1-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 1 671008 671088 Leu CAA 0 0 63.3 40.20 23.10 Inf Arg 66.6 IPD:-19.60 Phanerogamae -NA- Dicot GCCTTGATGGTGAAATGGTaAACACATGAGACTCAAAATCTCGTGCTAAAGAGCGTGGAGGTTCGAGTCCTCTTCAAGGCA 81 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<. AACATTTCTATTGGCAAATAGCAGGTTTCCAAGTCCATGCCCAAGTACTTATTactttttgggttgtaattgctCGTGGAATATGATTCACTTTCAAGAT TAATATTGAGAATGCTTATTGAATTGGAATAAGTTCGGTAGCGGATCACGAGATCTTGGTGATCTTCTCTATCTAATGAATGGGCAGTCCGCTTTGAAAT + 45095_PtRNAdb chr-10.trna20-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 20 51932772 51932851 Leu TAG 0 0 69.5 48.50 21.00 Inf Leu 111.5 Phanerogamae -NA- Dicot GACAGTTTGGCCGAGTGGTctAAGGCGCCAGATTTAGGCTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACAGCTGTCA 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. CTTGTAGGTCGTAGGCTTCTAGCTGTCAAACTGGTGCATCACCAGCTTTGACTTAACTATATAGTTAAATATGTTGTTGTTTTAACACGAAGCAACAAGG atatttctttttgaaagcTTAGAGCTGGCTCATATGATATTCTTTCAAAGGTCCATTCAAACGAGCCCATTTTAAGCTGAACATGGACCTAAATGATCTT + 45096_PtRNAdb chr-10.trna21-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 21 54529772 54529850 Arg ACG 0 0 44.2 38.30 5.90 Inf Ile 60.4 IPD:-31.00 Phanerogamae -NA- Dicot AGGTGGGacttgTAGCTCAGAGGAttAGAGCACGTGGATACGAACCACGATGtCGGGGGTTCGAATCCCTCCTCGCCCA 79 .>>>>>>.......>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.. AAAGACACTTTCACATATTCTTAACCTGAGATGGCTGGGGAGAGGAAAtgttccttctttttttttgaaggtACTCCTGGGAACAGATCTAGTGGAGATG CAACCGGCCCAAAAGGGAAGGACCTTTCCggaaacattaatttaaaacttgggtttgaatttcattattatgtAAATGGTGAGAGAGAAATGCATATATT + 45097_PtRNAdb chr-10.trna22-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 22 56073210 56073282 Arg CCT 0 0 69.5 51.90 17.60 Inf Arg 80.3 Phanerogamae -NA- Dicot GCGCTTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAGGtCATAGGTTCGACCCCTATCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. tttctggGAGATCACATTCTATTCGGTTGAAATTGTGTCATATACAAAGATTGAACTTTTATAGtagaattattatataaatagaaCCTTGTATCAGGAC TTTGTTTCCATTTTGGGGtttattaataaacaaatgttttaatcGGAACgatacaatttataaataactataaaatgttatttccgaaattttatttatt + 45098_PtRNAdb chr-10.trna23-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 23 56727108 56727179 His GTG 0 0 63.0 33.70 29.30 Inf His 86.8 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ttaaccAATAGATTTAATAACAtccattgaaaaataaatcaagtatTCACCTACCACTTAACTTTGGTTATATTTATTGCTTACGGAAAAATGACAACTT aatctttttatattttttccattttaattcaaACCAAATCCTAACTTTAAACGCGGCGGTAACAGTTGGCCCATTGTTGAAGTCAGCGGTTAGTAATAgt + 45099_PtRNAdb chr-10.trna24-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 24 57059098 57059169 Pro AGG 0 0 57.2 34.10 23.10 Inf Pro 98.9 Phanerogamae -NA- Dicot GGACATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCTGAGTTCAATTCTCGGAATGCCCC 72 >>.>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. AAATGTGTGAATCGAACAAGGATTCATCTTGTAAGGGTTTTAGATGGTTTTTGTAATAtgtgaatatttaaaataatctttgGAAAACGTACTTCAACAA ATTTCTTAGTTTTATTAAGGGTAAATTCCACACTAGGCCACTAAACTATTAGTGAATTTACATTTTGgttgttcaattttaaaaggttatcactgaatta + 45100_PtRNAdb chr-10.trna25-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 25 57281407 57281479 Lys TTT 0 0 88.7 64.40 24.30 Inf Lys 93.7 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAACATTCTGTAGGTGAATAGTAAAGGATGAGGTTATCCCAGTCTTTGTATTAACAATTTTCTTGTAAAGACTTTTTTAAATAGTAGCTCTAGCAATGTA GATTTGCTTGATATATTTTAGCTTCTCACCAAATTAATACAATGCTAAATGGGTCAACTTTATAGCGAGAATTATTTTGATGCCGCttaattagaattaa + 45101_PtRNAdb chr-10.trna26-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 26 61075120 61075191 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TGGGAAAAATTTTAGATTGAGTGTATTAATATCATACGTAAGTGGCCGATGTGGTAAACACTACACTATGAATAGATAGAATATAATTGTTAAGCAACAG ATTAATTTTGTCAACATTGTCCCTGAACTTTGCaagttttttcaatttaatctctaaattCTTTTTGGTCCATATTTAGTTCCtgaatttggaatttttt + 45102_PtRNAdb chr-10.trna27-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 27 61092565 61092645 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. tGTAGCATAAGCATAGGGACTAAAACTGAAATTTAACTAATAAGATAAAAAGGAAGGCTCATATAGATGTATATACTAAAGTAAGAACTTTGACCAAAGG ATTgttttctaattattttgattacatatttatatggttaaaagttatattacttttagttttacaaattttttgaatttttatttattcttttaacaac + 45103_PtRNAdb chr-10.trna28-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 28 61891973 61892046 Val CAC 0 0 82.4 54.40 28.00 Inf Val 103.7 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCGAACCCGGGCTCAGACA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. attttaaatactttttgtgattatttaatttcatctcTATATTCAATTTGCTTTTATTtctatatgattttatatttagatGCGAAAGCCAGCTTTCATC tgtacattttaattttgtttcttttcctctGCCCATCCTTAGTAATTAGCATCATACACTGGTTTGAGTGTTGCAGTAAAGCCTTTTTTAACAAAACACC + 45104_PtRNAdb chr-10.trna29-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 29 61962665 61962736 Asp GTC 0 0 57.6 37.70 19.90 Inf Asp 82.4 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGCGGTgAGTATTCCCGCCTGTCACGTGGGTGaTCCGGGTTCGATCCCCGGTAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. atccacaactttcacaaagtataaggactaatagcagaatttaacctttCCAAAAAATGTAGTTCATAAATATGTATTACATTAGCACCTGGTCAAGACA ATATTTTTTTCCATTCCGACGTACCGGATTGTCCAACCAGGTTAGTGATTCGGGTCAAAAATATCATTGATGCCCTTGTATTAAGtgtcaaattgtattt + 45105_PtRNAdb chr-10.trna2-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 2 2007137 2007209 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTCAAGGCCTACCTCACACCTGGGCTTATTTTGGGCTTCCCGTGATCAACTATAACTTATTTATGTTAAAAGCCATACTACATTTTCAGATGTCAGCCAA ttttctttttttaatgtcattttgaTAGGAGCATTTTGACGAACATCATATAGACACAGACTATATCTCTGTCTTAGTGTTCACCTTCTTCCACTTCCAA + 45106_PtRNAdb chr-10.trna30-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 30 61165916 61165843 Ile TAT 0 0 85.9 70.60 15.30 Inf Ile 103.9 Phanerogamae -NA- Dicot GGTCCCGTAGCTCAGTTGGTtAGAGCGTTGGTCTTATGAGCCGAAGGtCGCGGGTTCGAGCCCCGCCGGGACCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. atattttaatatttaaagaaatggtaaaaacatcaatatttaaaaaggcaaaaacaaattttaatatttaaatagtagagtttgtttttttaaaaaatgt ATATGCATTTTGCTTCATTAACTGTTTTATTAGCTGATAAGCCacggataaaaaaattaaattaaacactaaGGTAATTGGTCCCGTAGCTCAGTTGGTT - 45107_PtRNAdb chr-10.trna31-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 31 61165763 61165690 Ile TAT 0 0 85.9 70.60 15.30 Inf Ile 103.9 Phanerogamae -NA- Dicot GGTCCCGTAGCTCAGTTGGTtAGAGCGTTGGTCTTATGAGCCGAAGGtCGCGGGTTCGAGCCCCGCCGGGACCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTTCGAGCCCCGCCGGGACCAATATGCATTTTGCTTCATTAACTGTTTTATTAGCTGATAAGCCacggataaaaaaattaaattaaacactaaGGTAATT atttgaaactaattaatattcaTGTTATAATGTTCTtaggtttgaaattttataaagggttaaaaaagttttggataaaaatattttggtttattataTG - 45108_PtRNAdb chr-10.trna32-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 32 59693086 59693016 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CTCAAATTAATGCTTAAATCCAAccattcattcaattaattacattaattagaTACAtgctttctcttttttattttttacctttTGTTTTTATCAACGA TTCTTCAATTGAGCTGTGACGATAGCTGCGCTGTAGCGGAGTTGGGTTCTTCGCAATCGTCTGATTTCAAGACGATATCAACGGCGCCTCTGagctttca - 45109_PtRNAdb chr-10.trna33-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 33 59678371 59678301 Gly GCC 0 0 57.3 41.80 15.50 Inf Gly 86.0 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCTGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>.>>>.......<<<.<<<<<<<<. ATTATCTCagtcaataaaataaaaaacaacacGCGTGTaacattgaatattattttcataaacagAAGCTATTGTTTATATTTCTCCGCATTATCAACAA TCCACCAATGAAGCTGTGACGATATCTGCGCTTTAGCGGAGCTTGGGTTCTTCGCAATCGTCTGATTTCAAGACGATATCAACGGCGCTTCtgagcttct - 45110_PtRNAdb chr-10.trna34-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 34 59677012 59676942 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. agtttaggTTTAATATGAGATTTGAGGTATAAGATAGGGCCTAATTTCTAGTAAATCCGATTAAATAGTACTTATAAGGGCTATTTGATACCAGCAGCAA TCGCCGGAGCTGTGATGATTTTCGCGCTCTTTCGAAGATGAGGGTTCTTCGAAATTAGCTGATCTTCAGACGATAATAGCAGCGCTTCTGAGCTTCTCTT - 45111_PtRNAdb chr-10.trna35-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 35 59675333 59675263 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. atgtattttaaatataaaatgatgatatgaaAATTCATTTGTAGTATATATTTGAAATCTATTTGTCcaataatattttgagaaaaaaaggtGCCAAGAA TCCTTCCCGTTGAAGCTATGACGATAGCTGCGCTTCAGCGGAGTTTGGgggttctttttattttaaacgtCATTTTCCGTAACTACTAACGAGGTTATTT - 45112_PtRNAdb chr-10.trna36-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 36 59674996 59674926 Gly GCC 0 0 22.6 16.80 5.80 Inf Gly 52.3 Phanerogamae -NA- Dicot GCACCAGTGGTCTGGTGGTAGAATGGTACCGTGCCACGGTGCAGaCCCAGGTTTGATACCTAGCTAGTGCA 71 >>>>.>>..>>.>.......<.<<.>>>>>.......<<<<<....>.>>>.......<<<.<<<.<<<<. ATTTCTCAAcatcttttttaaattattagtttaattgtTCCAGAGTTTTTGCAAATGGAATTATGGTTTTCTAAGATCTATTTCATTACAATTGCAACAA ACACCTTCTAAGCCATGATGGTAGCTGCGTAAGATTATCTTGAGTTGTGCATACGTTGAATTGGACCaagctaaattaaataaataagggttaaactatt - 45113_PtRNAdb chr-10.trna37-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 37 58123780 58123709 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. attaatattattaaatcattaaaattaattaattagaatgataaaagtaatttaatttttatatagtttaaatatatttttacactaCCATTTTCAAAAA TATGGAAatacttttctatttttcagaAAGTCGTAGCTTTTAGTCCCCTTATTTGAATTTAGCCTATATACttcaatttgattaattttagtttatgtga - 45114_PtRNAdb chr-10.trna38-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 38 57838723 57838652 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AaacaaacatagaaaaataaataaactatattttgtaAAAGATTTACACCGATCAATCAGattcttatttataaatatttttaaaaattttaccaaaaat atgaaatattttaatagcaTTATTTTGAACCGGCTCTTCAGTAATTGGGCTTTTAAATtgtttcttaaaataatttattaatggcataatgatttatttg - 45115_PtRNAdb chr-10.trna39-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 39 56683327 56683254 Asn GTT 0 0 44.6 34.60 10.00 Inf Asp 64.3 IPD:-64.30 Phanerogamae -NA- Dicot TCCGttTTGTAGTATAGTGGTgAGTATTCCCGCCTGTTACGCGGGTGaCCCAGGTTTGATCCCCGGCAACGGCG 74 .>>>..>>>..>>>>........<<<<.>>>>>.......<<<<<....>>.>>.......<<.<<<<<<<<.. CAATTTTTCGTgaacccagtctctgagggattgaccctactccctatactacTCAAATTGAAAATTAGGCGTAGGATTATATTGGTGGAATCGACACCCA ccaaaactGATGGGTGTTGATTCCACCATTATAATCCTACACTTAATTTGCAATTTGAGCAGTATAAGAAGTAGGTTCGATCCCTCAAAGACTGGGTTCA - 45116_PtRNAdb chr-10.trna40-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 40 56546961 56546889 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttctatttcttttattctacATTCTAATTTCAGACTCCAATAAATTATAACAAAgtcaaaatattgattattagTATAAGACAATTTAGCAACAGTACAA ttttctttgtttttattccGGGCTTTCCTTTGCTATTCTCTTTCCCCCTAAAATGGGCCGACCTTTTTAGCCTTAAGTTTAACTCACTTTTACGATGGGC - 45117_PtRNAdb chr-10.trna41-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 41 56539838 56539766 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATCGTTGTGAACAATAGCAACATGAGTTTGATACCCTTAACATGATAGTAGCACTcgttattttaaacttttatttaaagCCTGATAATTGTACAACTAA acttttagaatatttttgcTAGATGTGCTTTTCTATTTCCCCTGGGCCTACCTTTTTAGGCTTAAGCAGAGAAGCCcgattagttttatttatataatat - 45118_PtRNAdb chr-10.trna42-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 42 56416224 56416152 Lys TTT 0 0 82.5 66.00 16.50 Inf Lys 89.4 Phanerogamae -NA- Dicot GCCGCCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GAGTAAACGCGTGTAATTTCAGTTAAtatttcttcataattttcTCCTAGTCAAACATTAacactaagaaaattttttaataagcaAAGCAGTATCAACA attttagaatatttagaccttcttttgtttttttcacattatttgaaatttctttatGGAAGAAAAGAATCTGTGGAGCCAACATTTCGGCTTTACCAAA - 45119_PtRNAdb chr-10.trna43-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 43 56132785 56132714 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. atagaacTTACCCAAAAATTGGATGACCACTCAAGTtgtttacccaaaaattaaatcgaaattgttttgaaaaattatattaacctGCAGCCAACAGAAA tttctttcaattttttcagcTATAACTGTAAAAAGCATGTAAAGTAAACCAATGACCCGTGTAGGgcatttggtctagtggtatgatTCTCGCTTAGGGT - 45120_PtRNAdb chr-10.trna44-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 44 56132650 56132579 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTGCGAGAGGTCCCGAGTTCAATTCTCGGAATGCCcctttctttcaattttttcagcTATAACTGTAAAAAGCATGTAAAGTAAACCAATGACCCGTGTA CTTTCTTTTTCGCTTTTTCCAGCTATAATTGGAGAAAGCATGTGAAGTGAACCAACGTCCAATGGCCTATAAACTTTGATATCATGTCATTCTCGGTTAC - 45121_PtRNAdb chr-10.trna45-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 45 55709153 55709081 Ala AGC 0 0 63.4 38.70 24.70 Inf Ala 96.4 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGcACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGGATTTGCCAACCttctcttaattaaaatatattcaccCTAGAATCACCCACTTAGGATTATTGCTTTAAACTTCACTAAAACAAGGCGTCAACGACAT tttttacttttttctcgAGTTCTTTTAAGTGGAAAAGATCATATATAGCTTCGACTTTTTTAAGCTTTCTGAAACTCAACTAAAATCTTTGCCAAATCTG - 45122_PtRNAdb chr-10.trna46-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 46 55479179 55479109 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CGCTATCAAATTCCTTTCATGAATCCATAATTCTCAAAATATTTCTCCTTTTTAGTTTGATTATATTAATACGGAAACTTATACTTCAGATTATCAAGAA GCCTACATTGAAGGCATGATGACAGAGCCTtcttttttggtgaaattgatgTTTAGTAGTCTCATGCACATTAAATCATTGCAACTCAAACTGGTTATTT - 45123_PtRNAdb chr-10.trna47-Cys-ACA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 47 54366761 54366688 Cys ACA 0 0 41.5 21.40 20.10 Inf Ile 48.3 IPD:-16.10 Phanerogamae -NA- Dicot GGGCTTGTAGCTCAGAGCAttAGAGCACATGGTTACAAACCATGGTGtCGAGGGTTGAAATCCCTCCTTGCCCA 74 >>>>..>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<..<<<<. AGAGATGCACTTTCACATCTTCTTAACCCAAAATGGTTGGGAAGAGGAAAAGTTCCTTTTTTTAGAGTACTCCGAGGAACACGTCCATTGGAGACGAGGT AAAAGGAAGGACCTTTCCCTTTGGTAGGGGTAGAAAAATAATGATCGGGATAGCGGACCCAAAGCTATGGAACTTGAGCGTGGGTCTTTTGCCAAAATGG - 45124_PtRNAdb chr-10.trna48-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 48 52603321 52603249 Arg TCT 0 0 69.9 49.40 20.50 Inf Arg 99.6 Phanerogamae -NA- Dicot GCGCCTGTGGCCTAATGGAtAAGGCGTCTGACTTCTAATCAGACGAtTGTGGGTTCGAGTCCCACCAGGCGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GCTATTAAAAGTTGGCTTCTTCGTTGGAAATTAATTGGTGGGTATAGCTTATTAAACACACTTGGGCcaataagtaaataatttggAAGAGGAAACAAGA AGCCGggttgttttattataatttttgagttgTTTGGGCCCATTTCAGGCCCAGTGAACCAAACAACTAGTACAATGGAAATCTCGAAAAGTAAAAAAGG - 45125_PtRNAdb chr-10.trna49-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 49 52576685 52576614 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aggaaaataCTTCATGGACAGGAGCCTCCTCTTTAGATTGAGAGTTATTTATACTTTACTATCACTAAAGAAAGGCACTATTTTAAGGTCATGAACAACA ATTTCCCATTAATAAGAGATCCTTACTTTTTTGTACTGAAATGAGAAACGAAGACTGCATGAGAATTGCTTGTTGAAATAGTGAAAAACATCCCGTCCTA - 45126_PtRNAdb chr-10.trna4-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 4 5542653 5542734 Ser AGA 0 0 75.9 41.00 34.90 Inf Ser 111.1 Phanerogamae -NA- Dicot GTGGACATGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCTGTTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. GAATAGTGgaagaattttagcttttagtacttagcaaaaataataattttcatacaAAGTGAAACGTATTTAGTAATATATACCAAATTGTTTCAACTGT TTATCTCTTTTTTCATGCACTGATGGCTCTTCGTTCAATTTTTGGCCATCAAATGTCCTTCGTTTTAAGGTTATACTTGATAAGCAGTGATACTGATGAT + 45127_PtRNAdb chr-10.trna50-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 50 52576008 52575937 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tgGAAATTAACGAAAATACCTCATGGAGCTTCTACCTTTTGATTCACAGATGCTAcaaaaatgagtttttcaaaataaatgaacCCCTATAAGAGCAGCA ATTCCCACCTTAAATCCTTATCCAAtccttttcttttgaatttggGATGAAATCGCTTTGTCCAAGGACTTTACGAGCAGATTTAAGTTTATCCAGAGAT - 45128_PtRNAdb chr-10.trna51-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 51 52575106 52575035 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGGAAAATACCTGATGGAGCCTCTTCCTTTTGATTCAGAGCTACCAATGATTTACTACTATGGAATCAACTAAAATGATCTATTTTAAAAGAGTACAACA AATCCCCATAAAACTTTGATCCCACTTTTTGTTTTCTGCTGTCAAAAGGGAATGAAGCCGAATTTGGGTTTTCTTTATCGATTTTGATTGATGGGTTGTG - 45129_PtRNAdb chr-10.trna53-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 53 47799993 47799921 Arg ACG 0 0 71.7 49.10 22.60 Inf Arg 91.4 Phanerogamae -NA- Dicot GACTCCATGGCCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGTGGAGTCG 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCACTTCTGCGACGTATACACCATAGCATGACTCGGTTTTCGTGTAAACCgaattaacaattattttatatacaaaatttatacacatatatcaAGACAC aCATTTTATTTATCctgtttttttcccttaaaaatatCTGATAATCCATggatttaaaaatacattaacgGGAGCCTATTTCTAAATCTCACTGCTCCTG - 45130_PtRNAdb chr-10.trna54-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 54 42200936 42200847 Tyr GTA 42200899 42200883 72.0 38.80 33.20 Inf Tyr 110.0 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCACTGGTTCGAATCCGGTAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>........................<<<<<.....>>>>>.......<<<<<<<<<<<<. GAAAGATGCCCGACAATTTAAGCCTTTTAAATCCTCCTTTGAATGTTAAGCATCAAtaaaacatcaataaaaattttaattgtccACCAATAACATCTCT TGTTTTGCTTTTTCTTAATGTTTTTCGATGGGCACGATAATTTTTCCCTTTCCCTTCCATTTCCTAATACATTGGgcataaaattaatttggagAATGAG - 45131_PtRNAdb chr-10.trna55-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 55 28175658 28175585 Pro TGG 0 0 35.2 28.10 7.10 Inf Pro 40.2 Phanerogamae -NA- Dicot AGGGATATAGCGTAGCTtGGTAGCACGTTTGTTTTGGGTACAAAATGtCACGGGTTCAAATCCTATCATCCCTA 74 >>>>>>...>.>>.........<<.<.>>>>>.......<<<<<.....>.>>>.......<<<.<.<<<<<<. AAGAGTAAATGGAAAGATCCGTTTTGTATATCAATAGATGAAATAAGGGTGTGGAAAACAAGACAGGGATTCTCTACAATGACATTGTAGGCCAATTGAA CCTATTACTTCTCCTTTGAGCAGTAACGAGGGAGTCGTttttagattgattaaaattaagcatacataatctatcattttctcatattatatatgatata - 45132_PtRNAdb chr-10.trna56-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 56 28175400 28175327 Trp CCA 0 0 53.9 29.50 24.40 Inf Thr 53.1 IPD:-17.90 Phanerogamae -NA- Dicot GCGCTCTTAGTTCAGTTcGATAGAACATGGGTCTCCAAAACCCAATGtCTTAGGTTCAAATCCTACAGAGCGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<. tattatatatgatatatgatagTACAGTTGTGCGCGATGTATTGgggttataaaataaaagaatcctCTTTTTTATAGTCTTATTTATTATGATAAGAAA ATTCCGCTCTTGTTAGGTCGAAAATTACACCGAACTAAAAACATTGAACAGCAATTCAAATTTGACCTCcttggtattaaatttaatttaaaatttaaaa - 45133_PtRNAdb chr-10.trna57-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 57 21725728 21725657 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AACaatgaaatcaaatcaaacctCGTTCAAggacttttttcttttacaattacattaatAGGACAAGACCAATACTTATTTTGTAGCTTAGAGAGACAAG ATTCCCAATGtttcccttatttttttatttgaaaattttcactttcaGTCCTTTTACGTTGGATTATTTTCAGATCAATCACTTACAAGTACAAGTTTGA - 45134_PtRNAdb chr-10.trna58-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 58 21720641 21720570 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AACTCAATCTCCCCACAAACTatgaaatcaaatcaaacctCGTTCAAGGACACACTAATAAGATAataccaatatttattttttagattaaaatgaCAAG ATTCCCATgtttcctatatttttttttttgaaaattttcactttcGGTCCTTTTACGTTGGATTATTTTCGGATTAATCACTTACAAGTTTGAATGATTT - 45135_PtRNAdb chr-10.trna59-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 59 14494343 14494271 Ala TGC 0 0 56.8 40.20 16.60 Inf Ala 77.7 Phanerogamae -NA- Dicot GGGGATGTACCTCAAATGGTAGAGCGCTCGCTTTGCATGCGGGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>...>>>........<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttttattatcaaatatgtaagaaataaatcattgaaaatattatatttcaattgatttaactttttaaagaCACAATAGTTAAGAACGTAGCATGCACAA CTgcaataaacattttattttccttttcctagTGTCAAAGTTCcttgaaacggcgtcgttcacTCTCTCTTCTTCTCCCCTTTAGTCTCTACGGCGCATA - 45136_PtRNAdb chr-10.trna5-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 5 5707186 5707257 Gln TTG 0 0 73.5 53.70 19.80 Inf Gln 104.8 Phanerogamae -NA- Dicot GGTTCTATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTAGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. attttaatcttatttaattCCTTTTAATAGTATTGgagctaaattttaaaattttgttttattaattattaaaatttatatgaatcaCTGTAATCGATAC TTTTGCTCTTAGAAAAGAGAAtctcaaaatcataattttttgaataagcaCTTCCCATCTTACTTTGAGATAAAGGTTCAATCGAAGTGTTGAAGCTTGC + 45137_PtRNAdb chr-10.trna60-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 60 8733746 8733675 Gly TCC 0 0 69.4 44.60 24.80 Inf Gly 79.1 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACACA 72 >.>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<.<. TTCAATCCAATAATTGCAGCCCAAAGCAAACGCAATCTTTACGTTcaatcaactcaaataacttaTCATACATATTTTGCTCTTGGAAGGCAGCAATAAA TTTCAGAgaagtttcttttttattcgACCCCGGCAATATAAAATGAGcccaaattgataaattgaaacaAAGTGAATGGTTGGGTTTGCATTTGGTTGAG - 45138_PtRNAdb chr-10.trna61-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 61 8191239 8191158 Ser AGA 0 0 77.1 42.80 34.30 Inf Ser 110.5 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. TGAGTGGGCCATCACCAGACAAGTATGCATGGCATGATGAACAtgcttcttttttgtttgttttaaataattaattggtTTCTTAGAAAAATCTTGTCAA CTTTTTTCGAATTTTCATCTCTACTTTCTAAAGCAACGTACGGTTTGTCTTCGGATAAATGGTGGATGAGTATcgaatattttttaacataataatttta - 45139_PtRNAdb chr-10.trna62-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 62 8047499 8047428 Glu CTC 0 0 34.3 28.90 5.40 Inf Glu 40.9 Phanerogamae -NA- Dicot CTCGTTGTAGTCTAGTTGGGTAGGTACTCGGCTCTCACCCGAGAGGCTCGGGTTTAAGTCACGGCAACGGAA 72 .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>.>.......<.<<<<<<<<<.. ATTGCACGGGAGTTTAAAACTAGTATATGTTAAAATCGTAAAGACTTTGTTGCACCAtgtttattattcaaaattataaaaagacaAGCTTCTAATAAAA CTTTCCATTTTGCATAAAAGATGAACGTAAAATCTACagttacaaaaacaaaaatccaGAAGGTTGAAATAGTTTAAAAGGACTAAGATTAAACTAATTG - 45140_PtRNAdb chr-10.trna63-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 63 3925660 3925588 Lys CTT 0 0 73.2 62.20 11.00 Inf Lys 93.9 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGAAG 73 ..>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<... taaaatggttgaTTCTTTTTAACAAGTTTGGTTAACTTCAGCATTTAATAAAATGAGAACTGAGAAGCTTGTAATTACTAAACTTATATCGCGACAAGAA attttttacattttccaAGGAACTGGAAactattagtttttaaatttgtaagaaGTTTATAATCTTACACAATGGAGATCAATTAGCCCGTCTAGCTCAG - 45141_PtRNAdb chr-10.trna64-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 64 3925502 3925430 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GCCCCACGGTGGaagattttttacattttccaAGGAACTGGAAactattagtttttaaatttgtaagaaGTTTATAATCTTACACAATGGAGATCAATTA ATCTTTAACTTTTTCCAAGTAACTGGAAAcaattagttttgaatttgtaaaagaatttaCACATTCTAGATCAACCGGCCCGTCTAGCTCAGTCGGTAGA - 45142_PtRNAdb chr-10.trna65-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 65 3925352 3925280 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GGGTTCGAGCCCCACGGTGGGCGATCTTTAACTTTTTCCAAGTAACTGGAAAcaattagttttgaatttgtaaaagaatttaCACATTCTAGATCAACCG CTTTTTTGGATTTTTCctatgattaaattgaagtgAAGTGAGAAAGAGAAAGGACTAGAAGTGAATTTTAGCAAAAATGGACAATGAATCAAGGATGGAA - 45143_PtRNAdb chr-10.trna67-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 67 1302976 1302904 Phe GAA 0 0 76.1 54.40 21.70 Inf Phe 115.3 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCACGTGTTCGATCCACGTTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GATTTTGGATCACTCTAATTACAATAGTTCTAGGGAGGTTGAATTTAGGAGAAAACCTTCAAATAAGATTTAAAGTAGTAAAATTGAACGGTAAGCATCT atttttattttttgaatcgGGTTAATTGAGATCAGGGCAGGTCTAACGCTTGAGTATTCCTTTTTGGATTGAGTCAATTGGGGTCAGGGTAGGTTTAAGG - 45144_PtRNAdb chr-10.trna68-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 68 1298981 1298909 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. AAGTGTTATAGCTAGGGCTTCGAATGGTAGACATTAGGGTATACATTGGAGGGAGTgaagataaaatatatttgtttaagcACAGTTCTAGAAAGCATTG tttttatctaattttgaaGATTATATTCTTTTAGCTAAGTTCAGGTTGGAGCTTTTTTAGGTTCAGATTATATTCTTTTAGTTAAGTTCAGGTTGGAGCC - 45145_PtRNAdb chr-10.trna6-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 6 8084157 8084229 Arg CCT 0 0 69.5 51.90 17.60 Inf Arg 80.3 Phanerogamae -NA- Dicot GCGCTTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAGGtCATAGGTTCGACCCCTATCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. CATCGATTTTCGGTTTCACAATATTTTTCTTGGTCTTGTTGACTAGGCAAGaactataattttatcaatattatagttaaaaattaattaatgtccaAGT GTCTAGTTTGTTTATTGCTTTTTGGGtagatattttttttggtgCATTCGGCTTTTCCCATTCATCATGGGTCCACGTGTACCATTTTGTGCTGCCAATT + 45146_PtRNAdb chr-10.trna7-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 7 11764402 11764473 Pro TGG 0 0 69.2 36.90 32.30 Inf Pro 112.8 Phanerogamae -NA- Dicot GGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAACGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GATACACTATATGTAACTTAAGTTGTGTGCCCTTATAgccaaaaaccctaattaatttgaaagattggaatAGATATTTTAAGTTGCCAAACAATCAGGA GAATTTATGAATGCTTTACACATTTTCTATGTGATAATGGTCTTGATTTCGGCAGTTCTGTTTTCCATGTGCGAGAGGTCCCGAGTTCGATTCTCGGAAT + 45147_PtRNAdb chr-10.trna8-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 8 20170118 20170201 Leu CAA 0 0 77.9 54.30 23.60 Inf Leu 125.0 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCCTCGAGagaGGgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>><<<...<...>>>>>.......<<<<<<<<<<<<. gaaaagaattaattataaatttgtactgagatttttaatattaataaaaatactaaatttacaATCAACCCTATTGACGTATTGGGAAATAACGTGTTAG AATTAAACTTGATTTTCAATTAGTATGGCTCTGGCTCTCTTTTGTCAACAAgcccaaatttttaaaatatggttCATGTTTCTCAAAAAGCCCAAAAACG + 45148_PtRNAdb chr-10.trna9-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-10 9 20171287 20171370 Leu CAA 0 0 81.0 54.60 26.40 Inf Leu 125.6 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.><.<<<...>>>>>.......<<<<<<<<<<<<. TCATAAATTTGTACTgggatttttaatattaacaaaaaaatattaaatttacaatCAACTAAAGCAACGTATTATAAAATGCTGTTTTAGCAAGCATTCA attttaatttgatttccattAAATATGACTCTGGCTCTCTTTTGTCAACAAgcccaaatttttaaaatatggttcatttttctcaaaaagCCCAAAAGCG + 45149_PtRNAdb chr-11.trna100-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 100 3151892 3151820 Arg ACG 0 0 62.0 43.90 18.10 Inf Arg 83.0 Phanerogamae -NA- Dicot GACTCCATGACCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGTGGAGTCG 73 >>>>>>>...>>..........<<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. agttgcCGCTGCTAGGAAGAGCGCGGGAACCAGGCCAGGAGAGGAAGACGAGGAAAATTGCttatcaagaaaataataatataagaaatttcGTACATAC aatttctctttttccaatttttaagtTGTGGTGGTCCTGAACCCTGAGGATTAGTTACCAAGTACAACCTGATTTATATgcaacatattttatttatgta - 45150_PtRNAdb chr-11.trna101-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 101 2796366 2796293 Ile AAT 0 0 46.5 38.90 7.60 Inf Ile 65.4 Phanerogamae -NA- Dicot GGCCTATTAGCTTAGTCGGTtAGAGTATCGTGCTAATAATGTGAAGGtCGTAGGCTTGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tgtaTCCTGCTGGCCACATTAAACTAAAAGAAGAAACATATAACCCAAAATTGAGTGGCTGAATGCTCAGGAAAGTGAAAATAGAACTTAGATAAACAGT AataagtaaatttctttttatcttttttaccTCTTCAGGGCACTGCATAGGCTGGTGTATGCATGGAAGCAGAGAACATCATATAAGCAATCCCACGGCA - 45151_PtRNAdb chr-11.trna102-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 102 2743208 2743137 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TGATATGGGATGAAAATGGGGACCAAATTGGTCATTGCAAGTCATTGTGTTATTTTATTAGGtgatcaattaaatattttattatgaactAATCAAATCA atatttttatattatgggCAATtaccctattttttatttttatactccATGGGCCACTGCCCCGATACCAAAAGAATTTCAAACATAAGCCCgttttgag - 45152_PtRNAdb chr-11.trna103-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 103 2518898 2518828 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CTACTTTGCATCACTCGAAGTTCCAACAAGTTATGGAGATTCTAAATCCTTTTTTTCTTAACTTGTTctagtatataaaaattataagctTGACATCAAA ATTATAACATTTTTGGCTTCATTCACTTTcttcattatttatatatatttccataTACTAAAAGAAAGtatgtattttttgaaatttgtaccaaaaaatg - 45153_PtRNAdb chr-11.trna105-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 105 2105177 2105106 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GCATTGAGAAGCAGGTGCGGGAAATCCAGTTATTAAGGCCATCCCAATATCGTTTTGTTTCaaggaattaattaaaaatattttatacgtTAATCAAACA agttttcaatttttcaaatttagtcctCTTACAGTTTTAATTCGAGGAATTTTTGTCATTAAagtctctaatttttttcaattctgtCGTTACAGTCGtt - 45154_PtRNAdb chr-11.trna106-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 106 1615847 1615776 Asp GTC 0 0 67.8 44.80 23.00 Inf Asp 91.6 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGCGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tatagttatccctacaaaaaaatagttttatacaTTCATGCCAACTAGACAAGTCACATTTGTCTTTATTATGTACTTTTGGATTTTCCTTATCAAACGA gctttttattcttttcaaaattttactttcaGTTTAAATCAAACCGTCACTTAAAATCCTGTAAACCCAACCGGCGAGCGACCGGCCGACGGCTCCGTTT - 45155_PtRNAdb chr-11.trna10-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 10 2799587 2799658 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTTTTTTCTGAAGTTTCCTGGAAAGTCTATATAAAAgcgaatttcaaattttttgtttctattattactgtttttatttatttgtgagcTTAACCAATTA tttttaatgttttgggttttgttttctAATTATGATAATGTGGTAAAAATATCATGGGCTCCTTGTACTAAAACATAAATTGCATTCTGCCCCTATCAAA + 45156_PtRNAdb chr-11.trna11-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 11 2819995 2820066 Glu TTC 0 0 74.3 46.90 27.40 Inf Glu 98.8 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATACTTGGCTTTCACCCAAGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GGTAGCTCGGTCTTTAAATAGAGCAGGCTTGAAAAGGATCTCATAGTAGgataaacaataattaaaggAAAACAACACACTTGGATATCCTAAGTATTAG ATTTTCTCTTTCCCTTTGCGAGTTTTTTTAGAGCCAATTGCACCAAATATCCTCAAACTATTACCCATATTTTAAGTTGATCTCTAAACTTTAGAACATT + 45157_PtRNAdb chr-11.trna12-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 12 3160466 3160538 Arg ACG 0 0 72.0 49.70 22.30 Inf Arg 93.9 Phanerogamae -NA- Dicot GACTCCGTGGCCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGCGGAGTCG 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTTTTCTTCCGTTATATTCAATTTCCATTTTTTGGATGTATGTGTTGCATAATGTAGACACTAATTTAGATCTTTTTATCAGAAGATAGCAACAAAGAGT TGTCTTCTAGTTTAAGTTTTTGCACCGTGTTGACTGCCTAAAAGGTAATTATGGTATATAGTAGCTGAATTTGGCTTCAATGATCAAGTTGGTACTTGAA + 45158_PtRNAdb chr-11.trna13-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 13 3295282 3295355 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. agTTTTTTAACTTAATGACATTCCATGGTTGGCAAATaactaaaaccttaaaaaaataagttatgtCTTTAGATTTAATTAGGAATACCATTTGACATGT tatttttcattttaagtcgTCTATGAGTAGTGGGTGGGTTCAATTGGCTGCTCTCGATTCTATATCTTAATTGGAATTAATGGGTTCTTGAATCgtgtca + 45159_PtRNAdb chr-11.trna14-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 14 3844095 3844167 Lys TTT 0 0 89.6 66.00 23.60 Inf Lys 96.4 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCATAATTACATAATTCCAGCTCGAACGAAGCACAAGATTTAGTTTGTGAATTGTGATTATATCTACAATAAGTTTAACGAGGATGGCTTGTCATTAGTA TTTTGTTTTGTAAATTCTGTTTTACATTTTTGTTTACCGAAGAGAAGAGGGAGAACCAGAACTATGTTACCGTCTATCAGTAGCCGTCTTAGCTCAGCCG + 45160_PtRNAdb chr-11.trna15-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 15 3844250 3844322 Lys TTT 0 0 82.2 66.20 16.00 Inf Lys 86.1 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGCGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<. CGATTCCCACAGACGGCGTTTTGTTTTGTAAATTCTGTTTTACATTTTTGTTTACCGAAGAGAAGAGGGAGAACCAGAACTATGTTACCGTCTATCAGTA TCGATTTTTGTAAcctctatttttacatttttgtttaCCGATGATCCACCGCCATGCTACTGTACATCACCAGCCGTTTTAGCTCAGCCGGTAGAGCGCG + 45161_PtRNAdb chr-11.trna16-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 16 3844395 3844467 Lys TTT 0 0 86.3 64.80 21.50 Inf Lys 92.4 Phanerogamae -NA- Dicot GCCGTTTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCAATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTCGCGGGTTCGATTCCCACAGACGGCGTCGATTTTTGTAAcctctatttttacatttttgtttaCCGATGATCCACCGCCATGCTACTGTACATCACCA TTGTGTTTTGTAAATTCTGTTTTACATTTTTGTTTACCGAAGAGAAGAGGGAGAATACCGATGATCCACCACTATGTTACTGTCCATCAATAGCCGTCTT + 45162_PtRNAdb chr-11.trna17-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 17 3844560 3844632 Lys TTT 0 0 89.6 66.00 23.60 Inf Lys 96.4 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGACGGCGTTGTGTTTTGTAAATTCTGTTTTACATTTTTGTTTACCGAAGAGAAGAGGGAGAATACCGATGATCCACCACTATGTTACTGTCCATCAATA TTGAGTTTTGTTGTTactattttacatttttgtttACCGAAGAGAAGAGGGAGAACACCGATGATCCAGCACTATGCTACTGTCTATCAGTAGCCGTCTT + 45163_PtRNAdb chr-11.trna18-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 18 3844725 3844797 Lys TTT 0 0 89.6 66.00 23.60 Inf Lys 96.4 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGACGGCGTTGAGTTTTGTTGTTactattttacatttttgtttACCGAAGAGAAGAGGGAGAACACCGATGATCCAGCACTATGCTACTGTCTATCAGTA TCGTGTTTTGTTGTTtctattttacatttttgtttACCGAAGAGAAGAGGGAGAACACTGGTGATCCACCGCTATACTACTGTGCGCCATCTACCCCCAA + 45164_PtRNAdb chr-11.trna19-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 19 4051402 4051483 Ser AGA 0 0 76.3 41.60 34.70 Inf Ser 112.1 Phanerogamae -NA- Dicot GTGGACGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGTTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. CGGCTAATTTTTTGTGGCGTGGCTGGCAGTGTTTCCAGGAGAAAAgtgaattaataattaaagtattacAGGTGTAAAAGGAAAAACAGCAGCCAGGGTG AATGATAATTCTTTTTATTGCTTTGCTGTTGCCTGTGGCTGCAACTGTAACCATTATCTTTGTGACTATGAGGATAATGGCCTAGTGCTTGAGCAGCCat + 45165_PtRNAdb chr-11.trna20-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 20 6408680 6408753 Ile AAT 0 0 82.4 58.90 23.50 Inf Ile 107.0 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAAACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTGCGCACACGATTTCTTGtacgttttaaaattttcaaaattacaataaacaaagattatttaaagtactaaGTCATTAAAATCGCAACCTGAAGAATAT TTTCTATATTGCACATGTGAGTTTTGCagctctttttattttcaaaataaatccttatacttttattgaATCCAAGTTGTTAGTCTTTTATTATTCTTTC + 45166_PtRNAdb chr-11.trna21-Ser-CGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 21 6899822 6899903 Ser CGA 0 0 76.5 44.60 31.90 Inf Ser 118.0 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTCGAAATCTGTTGGGCTATGCCTGCGCAGGTTCGAATCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. cctacttattttattttaaatcattatttaatcTTTCACTTAAATTACAATAacgttttcaaaattatatactttttgATTAGCTTACCCAACAACTGTG ATTTTTTTGTTCCTTTACCGTAAACTACTCAATAGTCCCGTTAAAAGGAAAAACCAAAGTCTAAAACCCTTTTATCCTTTTCTCTTTGGCTTTCGCAAAA + 45167_PtRNAdb chr-11.trna22-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 22 8733938 8734010 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CAAATAAAAAGGAATCTTTTCCAAAAAATCCAAGACAACGTTGAACGgacttgaataaaattaaatttatataaaatgttgTTTAGCTTAAAATTCGACG TTTTGCTTTCTGCTGCTCCACGTAAGCCATAAAATGCCTACTCTTCTTGGCAGGCTCTCTCTTTTTGTATCTTCCCTCTGTTAGCCCCTTTAATAATAAT + 45168_PtRNAdb chr-11.trna23-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 23 8750260 8750330 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gtgttcaatttgatattaaCTGAATTTACCATTTGAACCTCTATGGATTATATTTGTTATACTTCAGAAAATCAACAACACATTCTTTTACTTTCAGCAA ACCTTGGAGCTGTGAGGTTATTTGCTTTGACTAAGGTTGGGTCCTTACACTTTCTTGATTTCTCTGATGAGTTAAGCGATTCTGAGCtccattccttttt + 45169_PtRNAdb chr-11.trna24-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 24 10397544 10397615 Pro TGG 0 0 69.2 36.90 32.30 Inf Pro 112.8 Phanerogamae -NA- Dicot GGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAACGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAATTTATATGGTGTTTCTAAAATTTGACTCCGCGTACGTATTTATATGTAGTCAAATGAACTATCATATTGTAAATATAGTAAGAAAATGGGTCAATCG TGTTTTCCCTGTTGgatatacatatttttcaattgcCAACAAACAGAAACAGCTTCAACAAGGGGTCGGTCGATCGAACCGGAGGTTGAGTTTCATTTTA + 45170_PtRNAdb chr-11.trna28-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 28 11056620 11056692 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTTGAAGTCAATGTCATACATGAAAAGATAAATTTCAGGGAAGCAGACAGTGGCtcttaataaaattacaaatatatttactGCACCAACTAGTCAACTG TACTTTTTTGctgtttttgagtttttttttttatcatttgaaatttaaaatttattttaatttcgtaagccttgtaccttttttatttaaaattttgatc + 45171_PtRNAdb chr-11.trna29-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 29 13745457 13745528 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTTTTAATAACTTATCAGTTCAAATGGAGTCTTACAATTGGTGTCTCAAGAACCATTACTATTTGAAtagatataaatttatataaaaacctAGCACCTG AAATCCCGATCCTTCCGGATCTATATTTTTCCCTTAGTTTTTTGCATGGGTAGTTTCGTCATTTACTTTCTTCCCGAAACTCTCCATATTTATAAAACAA + 45172_PtRNAdb chr-11.trna2-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 2 1005198 1005281 Tyr GTA 0 0 33.6 13.00 20.60 Inf Tyr 44.7 Phanerogamae -NA- Dicot GGGTCGATGCCCGAGCGGTtAAcGGGTACGAACTGTAAATTCGTTGGCAATATGtCTaCGCTGATTCAAATCTAGCTCGGCCCA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>...<<.<...>>>>.........<<<<<<<<<<<. CTTTCAAGGAGGCAACAGGGATTCAACTTCCCCTAGGGGTAGGGTACTACGAAAGGAAGTTGATCATGGATTATCAATAAACCTAGAATTGATTCTTCCT ATAATTCGCTGGTCCGCCATAACCTAAAATGCccatttttttgtattttgttttccCGAAAagccaaacaaaaaaattagggaagaataaaaaaagtcTA + 45173_PtRNAdb chr-11.trna30-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 30 17660682 17660755 Ile AAT 0 0 83.4 59.90 23.50 Inf Ile 108.6 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGATCCCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGTCTGCCTCTCCCAACAGAGGGAATGGAATAATAGTAGGATCTGATAACGACAAGAATTCATTCTGTTATATGTagtaatttgaaaaattgaagcAACT acaattttgttttttccttcttttttcagAAATCAGAACGTGGATGCACAAATGCATTAAACACCAAATAGCAATAGACGTTTCCCACGATGCCTACAAC + 45174_PtRNAdb chr-11.trna31-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 31 19623539 19623610 Asn GTT 0 0 56.5 46.90 9.60 Inf Asn 55.6 Phanerogamae -NA- Dicot TCCTCAGTAGCTCAGCGGTAGAGTAGTCGACTGTTAACTAACTGGtCGTAGGTTCGAATCCTACTTGAGGAG 72 >>>>>>>..>>>>.......<<<<.>>.>.........<.<<.....>>>>>.......<<<<<<<<<<<<. CTACGAAGAAGTTTCGGGGGTTATGAAGGAAACTTCGATTTCATATTGGTCATGGGTTGAGAACAGGAATTAAACTCTATGAGATCTAATCTCTCGTTGT ATTTGATTCATTCCAAATTAAAGAattcaaaatgtcaaaatgaaaGGGTTCGCTTTGACCGTTAAGAGCAGGTAACCCGTTCCCTGTGTCTTTGTTTCTA + 45175_PtRNAdb chr-11.trna32-Pro-CGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 32 21335777 21335846 Pro CGG 0 0 38.0 14.60 23.40 Inf Pro 58.6 trunc_end:13 Phanerogamae -NA- Dicot GGGTATTTGGTCTAGTGGTATGATTCTTGCTTCGGGTGCAAGAGAtCCTGAGTTCAATTCAGAATACTTT 70 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>..>.......<<<<<<<<<<. ttaatgtgaagtctataataccactaagtcaataaatataatttccaaataattatatgcaatatcCACTTCAGGGAATAtaccaaaatcttcaaatgca TAAAacccttttaaaaagagttttGCATAATTAGTTAACTATCAAGAATAACTACCTAGGTCATGTATAGAAACAAGCCTAtgttaaatatatcaataaa + 45176_PtRNAdb chr-11.trna33-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 33 26875813 26875886 Val AAC 0 0 72.2 47.80 24.40 Inf Val 98.2 Phanerogamae -NA- Dicot GGTTTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGAAGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CAGTATCTACAATTTTGGTTTCTGCACATTTCgctatttaaatattgttttctcaaatttaatatatctataaatataattgtaaaaagcCTTATCACGT ttcatacaaaatatatttctgGTTTTGTACATTTAACTATTTACATATTGTTTCTCAAAACTAATAAATTCAtagaaaataatgtaaaagacTCTTCAAC + 45177_PtRNAdb chr-11.trna34-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 34 26875989 26876062 Val AAC 0 0 72.2 47.80 24.40 Inf Val 98.2 Phanerogamae -NA- Dicot GGTTTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGAAGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. catacaaaatatatttctgGTTTTGTACATTTAACTATTTACATATTGTTTCTCAAAACTAATAAATTCAtagaaaataatgtaaaagacTCTTCAACAT TTCATGCAGAATATATATTTCTGGTTTTGAACATTTAACTATCTACATATTGTTCTCAAAactaataaattcataaaaaataatgttgacGACTCTCCTC + 45178_PtRNAdb chr-11.trna35-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 35 26876348 26876421 Val AAC 0 0 72.2 47.80 24.40 Inf Val 98.2 Phanerogamae -NA- Dicot GGTTTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGAAGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. atttttaaacaaaaatttttggtttctgcacattttactatttacatattgtttctcaaaattataaaaatatatagtaatGTAGAAGAATCTTCAACGT TCCACACCGGATATATTTTGtttcacaaaagaaaaaattgacgCTGTTGCCGTAGATTGAACCCTGGTCACCAGCGTGACAGGCTATTATATATCCCACT + 45179_PtRNAdb chr-11.trna37-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 37 26884503 26884590 Ser GCT 0 0 29.8 20.30 9.50 Inf Ser 52.2 Phanerogamae -NA- Dicot GGAGACGTGACTGAGTGGActAAAGTGTCGGATTGCTAATTCGTTGTGCGAGTTATTCGTACCGAGGGTTTGAATCCCTCTATTTTCG 88 >>>>>.>..>>>...........<<<..>>>>.......<<<<..>>>>>>>...<<<<<<<.>>>>>.......<<<<<<.<<<<<. NNNNNNNNNNNNTTCTATTGTTCTTGTCTTCTAAGTAAAAAGGGCTTTTTCAAGCCTTTCTTTTGTGTGTTGTAACATAGTAATTATCTTTTCTCAATTA TTTCGGTTTTTGGTAGTGGAATAGATCAAATCCTAAtaccatttttaaaaatgaagcaAGGAACTCTCCCTTTTTTATTCTTCGCATCCAGGATTAGGTC + 45180_PtRNAdb chr-11.trna39-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 39 35804609 35804680 Asp GTC 0 0 45.8 38.10 7.70 Inf Asp 60.7 Phanerogamae -NA- Dicot GTCATTGTAGTATAGTGGTaAGTACTCCCACCTGTCACGCAGGTGaCCTGGGTTCGATCCCCAATAACGGCA 72 >>>.>>>..>>>>........<<<<.>>..>.......<..<<.....>>>>.......<<<<.<<<.<<<. GGCAATCTAAACGACTCAAATCATCACCGAGGCGAGTTCGTATCAAAAAAATAGGATGTTGTTTCCACCTAGGATTATATGTGTTAGAGTATGGGTTGTT CGAAAAACTTGTTGTGTGTAAATATGTAATGCatatgtgcaagtgtacacgttgattcaattaatataatgatGAGTGAGAATCTTCTCCACAgcgataa + 45181_PtRNAdb chr-11.trna3-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 3 1100812 1100883 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aaaattaatttatttcctccttttcattttcatttcatcccTCCACTTTTCAACATTCTTACGTCTTTTAGCATTTTTCTGATTAGAAAATATCACCAAC AAATCCCGGTCCAATTGGATCCATTTTTGGTCCCTATAATTTTAATGCTTCCTTCCctcgctttttttttttttgagtaaaataaCACTCCTTTCTCAGT + 45182_PtRNAdb chr-11.trna40-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 40 42364801 42364882 Ser AGA 0 0 70.7 42.30 28.40 Inf Ser 105.5 Phanerogamae -NA- Dicot GTGGGCATGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>...>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<.<<<<<<. CAACATCAAGCCGTGAACTGAATCCCGAGTCCCGACCCAAAactaccaaaaaataaaaacaaaagtgaTATATAAAACTTTTGAAACGAAAAGCAAAGTA TTTTTCttattaagaaattataataaatgtaaattgtaaaaaaatataaaaatggtgataaaaatttaaaaattcaaaacaattataaaattatttaaaa + 45183_PtRNAdb chr-11.trna41-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 41 51302122 51302194 Arg ACG 0 0 71.7 49.10 22.60 Inf Arg 91.4 Phanerogamae -NA- Dicot GACTCCATGGCCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGTGGAGTCG 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ccgtaaaaccttttacatgtaaacaaataGACCCATAGTTGCTAATTaccacaaaattattttattctttttataatattttctatatcaGAAGCATAAT ctcCATTTCTTTTAGAATCCGTAAACCAAATTCTagttttccttttccttttttgtatatttgaattatatactgtttttatgaattaataatattgtaa + 45184_PtRNAdb chr-11.trna42-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 42 51941695 51941768 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gtattgttattaaataatttaaacttatatGGTCTTCAACCGGCGTTGTTGAATTTAAGTGGGTTGCACAGAATTATACGCATGAAATACATAGCAAGTT TTTCTGACAtaattttatggtttaatttgagaacaataacaatatttcaccaataaaataaatacatcggaatttaggaaaattaacaaatttattaatt + 45185_PtRNAdb chr-11.trna43-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 43 51979351 51979424 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CCATATATACAACTAGCGTTGTTGAATTAAAGTAAGTTATACAGAATTCTAAAACAAGAAAATCCGATAAATATACTACACATGGAAGAATGGGCAAGTT TTTCAcgtatatttttatggtttaatttGAAACCCAACCCAATactaaaggaaaacaaaaaggtaatttaccaataaaagccctttttaaaaaaaattac + 45186_PtRNAdb chr-11.trna44-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 44 52021492 52021565 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gtattgttattaaataatttaaacttatatGGTCTTCAACCGGCGTTGTTGAATTTAAGTGGGTTCCACAGAGTCATACGCATGAAATACAAAGCAAGTT CTTCTCACATGTTTTTATGGTTTAATTTGAAAACATTAACaatattttaccaataaaataCATACATGGGAATTTACGAAAATTAACAAATctattattt + 45187_PtRNAdb chr-11.trna45-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 45 52082683 52082756 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TATGGTCTTTAACCGGCGTTGTTGAATTAAAGTGGGTTGCACAGAATTATAAAACAAGAAAGCCTAATAAATTGGATACCCATGGAAAACACAGCAAGTT TTTCTCACACCATATTTTTGTGGTTTAATTTGAAACCCAACTCGATCCAATATCAAAACTGACCCAACCCAATAACATTAacaatattttacatatatcg + 45188_PtRNAdb chr-11.trna46-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 46 52084982 52085055 Asn GTT 0 0 68.4 48.10 20.30 Inf Asn 76.2 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGTTGTTAACAACAAGGtCGGAGGTTCAAGCCCTCCTTCTAACG 74 >.>>>>>..>>>>.........<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<.<. gtattgttattaaataatttaaacttatatGGTCTTCAACCGGCGTTGTTGAATTTAAGTGGGTTGCACAGAATTATACGCATGAAATACAAAGCAAGTT CTTCTCacatatttttatggtttaatttgaaaacattaacaatattttaccaataaaataCATACATGGGAATTTAcgaaaattaacaaatttattattt + 45189_PtRNAdb chr-11.trna47-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 47 54080950 54081021 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AACGAAGAGTTTTTATTCACTAATGGAAATCGTTACTAACTTTTATGGATGCtttcatactttttttataaacaaatatCATTTATAAATCCAACAACAG AGGTACTTCAATTTTTATTGCTTTCTCTTACTGACACGTGGCACACACCCACCagctttttttcattttataaatcagttaattttcaactttagtcctt + 45190_PtRNAdb chr-11.trna48-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 48 55264886 55264959 Ile AAT 0 0 82.4 58.90 23.50 Inf Ile 107.0 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAAACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. acaaaatatataatatcaaattatttaacaattgtACATGCATGGTTGTCTCTTATTCCTAGTGTACTAATGTAATTATATGTTAGATGTATAGCGTGTT TTTTTTACATTCCAGAGCTCCGTTTAAGGCCGGGCTCTGGTTGCACGCAAATCCAATCTATACTTTTTGAAGTTCGTCTATTTTTGTTtcataatggttt + 45191_PtRNAdb chr-11.trna49-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 49 55267030 55267103 Ile AAT 0 0 74.0 55.00 19.00 Inf Ile 95.5 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAAGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<<<<<. GTTTGTTAgacttgaaattaaatataaaagttgatCAATAGCTCCTAAGGAAACTGcagaactaaaataaataattattattttgaaaacagAAAGCAAC ctttgtttgaaattttcaactcattttcaaaacgGTGTCGCTTCTTTCAGAGCTCATTTTCGAAGTTCCTGTATTTATTTTgtcctatttatttatttgg + 45192_PtRNAdb chr-11.trna4-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 4 1968886 1968958 Val TAC 0 0 78.2 43.80 34.40 Inf Val 106.2 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTTAGTCTTACACACTAAAGGtCCCCAGTTCGATCCTGGGCAGCAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTTTTTACATTTTGTCACACTATCAAACAATGACACTTCCcatctttttatatttgaatttatataataagtaATATTACTTGGATTTCCTGACACTGAC AAATGGTATACTTAAATGCCgacttttattttgttcaaccaCGAAGATTCCAATACTAGGAATGGTTGCACAAAAGCCAAATAAAAATAGGGTCTCAAGC + 45193_PtRNAdb chr-11.trna50-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 50 55698441 55698531 Tyr GTA 55698478 55698495 74.3 42.80 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>.........................<<<<<.....>>>>>.......<<<<<<<<<<<<. aaaattttcataaaaaacatTTTCGGTCATTATAATTTGTTTAGATTTATACAGGtagaaagctattattatagaTTAATGTTGCGACAACTCTCAACAG GTTTTTCTGTGTAATACTATTTTGGTTTGGCAAAAACACCTTTACAAACCCTCTCAATTTAGATTTTGAGCAAATTGGCCCTGTAAAAGGAAGCggagca + 45194_PtRNAdb chr-11.trna51-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 51 58544708 58544779 His GTG 0 0 63.0 33.70 29.30 Inf His 86.8 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTACCATTAAATCAgttgattaagtaaattatcATATTCTCACCTTGAATCTAAGTTATGACtagttaaaataaatgtatattgaAATCCTTAACATATT CAAGAAAATGGTTTTTACCTTCATTGTCGCAACGTCTATTTTTAGGCTCTGTTCCTTTGGGCCTACTTATTGTTGAAAAAAGAACCCAAAACGCATTTCG + 45195_PtRNAdb chr-11.trna52-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 52 58545017 58545088 His GTG 0 0 63.0 33.70 29.30 Inf His 86.8 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CACAAATTCTAAAAAACCGTCGACTTCAAAAAAAACGTATTCTTGTTTTCCCCCTTGAGATCTAGTGATTACTTGAAGCTTTGGCTACGACGAACATCAA gtaagaaaatatttttccttcATTTCCACAACTTCTGTTTTTAGGCTCCGTTCCTTTGGGCCTACTTGTTGTTTAAAAAAGAACCCAAAACGCAAGTCGT + 45196_PtRNAdb chr-11.trna53-Arg-CCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 53 58545749 58545821 Arg CCG 0 0 80.4 58.30 22.10 Inf Arg 84.6 Phanerogamae -NA- Dicot GATCGCATAGCGGAGTGGAtATCGCGTTAGACTCCGGATCTAAAGGtCGTGGGTTCGAATCCCACTGCGATCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. attCATTTGAAACATTTTAGGTTTCTGCCTTTGATTAGTAGTTGGTGAGTCATCGCGATTCGCtaatataagtaaatttaaGGTAACTTCTAGTAAAAGC CCATCGTGttaaatctttttcttttccgaTTTGAACTTAGtggaaatttatatattttaggttttttagacaatttttttgttttaaaaataaaaaattg + 45197_PtRNAdb chr-11.trna54-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 54 59161410 59161482 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGcgaaatattttattagtgtttttcagttttcattcaaGGAGGACAGAAATTCATACATCTTctataactaaaaatttataattgagaCGTACGGCCAA tattttctttttggttttccaCTGAAAACAGAGAACCCAAATATTGTAACGGGCCTATTTGTTTGCTCTTAATAGACCGGGCTTTCGAGATTTTGGGTTC + 45198_PtRNAdb chr-11.trna55-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 55 59806618 59806690 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GGATTTGAGAGTCGAGGGGAAAAGGGTTTCTGGTAGAGTGATGAACTGAAAAGTAGAATCTAATagttttaaatacttagtattAAGATTGGAAGCAGTA TTggctttttaatgttttggattaattgcTCAGGGGTCCCTAAAAtatgagttaaaatttttaaattagtcattaaattatcaGATTATTCCAATTAGAT + 45199_PtRNAdb chr-11.trna56-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 56 59808857 59808929 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. TGGAACCATGGATTTGAGAGTCGAGGGGAAAAGGGGTTTCATTGACGAACTGAAAAGTagaatttaatagttttaaagtCTTAGTATTTCAGAATCAGTA TTgactttttaatgttttggattaattgcTCAGGGGTCCCTAAAAtatgagttaaaatttttaaattagtcattaaattatcaGATTATTCCAATTATCa + 45200_PtRNAdb chr-11.trna57-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 57 60643673 60643741 Phe GAA 0 0 41.8 30.40 11.40 Inf Phe 60.6 Phanerogamae -NA- Dicot GgATATCTCAGTTGGGAAAGCGTCAGATTGAAGATCTGAAGGtCACGTGTTTGATCCACGTTTACTACA 69 >.>...>>..........<<..>>>>>.......<<<<<.....>>>>>.......<<<<<<.....<. TAAAGCTTtggattaatttaaaaattttcatcaaacacTTAAAGTATTTGTAAATTGCAACCTTcctacataaataaataaacaattttattatttacaa CCAATTATCTTTGAAAtcttttaagtaaataattttctaaGGTGGTGTGTATAATTGTTTTTTAGCagtgataactttgcaaatttgTCACATAGTTTAG + 45201_PtRNAdb chr-11.trna58-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 58 62380804 62380732 Ala AGC 0 0 61.0 37.30 23.70 Inf Ala 92.9 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATTTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTAAAAAGCTCCATTAGTCCCTTTTAGCTCTTGATAGTTGCTTTAGATTAACATTAATCCATCTTCCTCTgtattcataattatatttttctttgctCAC ActctttacttttcttttcatttgtgGTCTTCCTATTGCACTGTGTCAAATTGGGGATCTTCAACATTAATAGTATTTCTTCCgatattttaagtaaata - 45202_PtRNAdb chr-11.trna59-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 59 61148562 61148490 Arg CCT 0 0 66.9 46.30 20.60 Inf Thr 78.0 IPD:-0.80 Phanerogamae -NA- Dicot GCGCCTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAAGtCATAGGTTCGACCCCTATCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. AACACTTTTGTCATAAATCTTTAGCCATCACCCACTTTTGATTTCttgaattacaaaatattttataataaaacatattggTAAATATAAAGGCATCGAG TCCTATTTGGTATCAGACATGATTTTTGGAATCGTCccttgatttttgatttttcatattaattttaggctttgatttattttattttaataaaataggt - 45203_PtRNAdb chr-11.trna5-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 5 2060674 2060744 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ATGCCTAGAAACTACAGACCATGGCCACCATTTTggtatttcttttgaaaataatctATATTTAGATGTAATACTTTTAATGAATTGAAATATCTAATTA ttacatattttttagtctggttaaattctgctattagtccctTCACTTTGCAAAAGTTGTAGATTTTATATCTAtcctttaatttgatcattttagtccc + 45204_PtRNAdb chr-11.trna60-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 60 61147164 61147092 Arg CCT 0 0 68.2 54.10 14.10 Inf Arg 82.6 Phanerogamae -NA- Dicot GCGCTTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAGGtCGTAGGTTCGACCCCTATCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. agaaaataaaaaaatttactaatttttctTAGAACTCATGGGAAAAAAAGCCTCTCTAGATATTAGTCATTTTCTTACTTTATGAATAACTTCCGTCGAA TTCTGTTATTGCttctttttgggattttttttgtgcttcttttttctttttttgtgattttatgaACCCCAGTCATCAGTGCGCCTGTAGCTCAGTGGAT - 45205_PtRNAdb chr-11.trna61-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 61 61147011 61146939 Arg CCT 0 0 72.6 51.90 20.70 Inf Arg 83.4 Phanerogamae -NA- Dicot GCGCCTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAGGtCATAGGTTCGACCCCTATCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. TTCGACCCCTATCTGGCGCGTTCTGTTATTGCttctttttgggattttttttgtgcttcttttttctttttttgtgattttatgaACCCCAGTCATCAGT TTCTATCGTAAATCCTTTTGgggtttcttttatttcttttttattttataggtcCGTTTCGCTTAGATTTTAATTCTCCATttcgatttaatttaatttt - 45206_PtRNAdb chr-11.trna62-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 62 58556265 58556194 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TACTCGGGTAACCCGAAATATTCTTTGGTATtatatttatccttaaaactttttaacgaaaataaacaaaaataaacgaaagtgaaaacgagtaacaATA ttttttctttctttatgtGGCCTTTTTTTCCTCAACAAAGGCCCACAGCAGGTCAGCTtcatatctttcttttttttaatggataaaataatataaagcc - 45207_PtRNAdb chr-11.trna63-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 63 58531278 58531207 Cys GCA 0 0 82.1 59.90 22.20 Inf Cys 106.6 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GGACcttttttcttatgaaaatgATCTGCATGAAGATTTTGAATTCTGTTTGTATTGATGTtgtcaatttataaaataaacaaataagcaGATAGCAAGT ctttttgttttaattttttcccaCTTTTCAATCGATAGTTCTACACGTTCACTTTAGGGTTATGTGGAAGTACTTTCTAAGGTTCATCTTTAgcacattt - 45208_PtRNAdb chr-11.trna64-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 64 57201694 57201623 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aaaaaaaatgcaaaaaaggggaaaaaactCGTGTTAAAAACACCCcgttgtaaaaaaaatgaaatatatataagttttacaGAATCCACTTATCAAAATT ATGTTTAACTTTCGCTGTTTTTGTTCCTTTTAATTAGGATAAAAGTACCTAATAGATCCCTGTATTATAGGGACTGTATCAtattagtccctctattatt - 45209_PtRNAdb chr-11.trna65-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 65 55700871 55700797 Met CAT 0 0 30.9 25.50 5.40 Inf Thr 36.1 IPD:-29.30 Phanerogamae -NA- Dicot AGCaTCCATGGCTGAATGGGtAAAGCGCTCAACTCATAATTGGcGAATTCGTAGGTTCAATTCCTATTGGGCCTT 75 >>..>>>>..>>>..........<<<.>>>>>.......<<<<.<.....>>>>>.......<<<<<<<<<.<<. GATGTCCTTTCATTAATTCTTCCTAAATTGCATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTTACCATGTACGAGGATCCTGGCTA TATGGAAATCTTGTGTACTTCGTgctatttttttatgaacttttcattacattttttttctttctaattttgcattttttttataaattttaaattacat - 45210_PtRNAdb chr-11.trna67-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 67 53966932 53966861 Asp GTC 0 0 61.0 38.10 22.90 Inf Asp 87.0 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCATTCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TCTGTCGGAGCTTCGGCCAGTTGCCGAATCGTTTGAGCCATTGTTGGTGTACTAGATTcgggttttcgttaaccctagcgTTAAGCACTTCTTCTGGTGA ccaaaatttgatgcggtcgttgaaagcaccaaaaatatcctatccctaataaataatgaaaaagaatagtaaaagagaagtagggtcaaatcctcaggga - 45211_PtRNAdb chr-11.trna68-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 68 52106807 52106734 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AATTATTGCAATAATATTGTTTACTATATATACAACTAgtattgttattaaataatttaaacttgcacagaattataaaacaaaaaaatcataccAAGGT TTTCTCacatatttttatggtttaatttGAAACCCAACTCGACCCAATATCAAAACTGACCTAACCCAATactaaaggaaaacaaaaaattaacaatatt - 45212_PtRNAdb chr-11.trna69-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 69 52048348 52048275 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gtattgttattaaataatttaaacttatatGGTCTTCAACCGGCGTTGTTGAATTTAAGTGGGTTGCACAGAATTATACGCATGAAATACAAAGCAAGTT CTTCTCacatatttttatggtttagtttgaaaacattaacaatattttaccataaaataCATACATGGGAATTTAcgaaaattaacaaatttattatttt - 45213_PtRNAdb chr-11.trna6-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 6 2061839 2061931 Tyr GTA 2061874 2061894 36.8 23.40 13.40 Inf Tyr 61.5 Phanerogamae -NA- Dicot TTCctTAGTTCAGTTGCTAGAGCGGAGGACTGTAGATCCTTAGGtCACTGGTTCAAATCCGGTaGGTCGAAT 72 >>>....>>>>........<<<<.>>>>>............................<<<<<.....>>>>>.......<<<<<.....<<<. ATTGCTCTTCAGGCAGtgaacttatatttttcttgtgAGGTTGACATGAATTCTCTATTCaaaagatatttaatatttttgtcattttataaaataagcC TTTCAATTCTtaagaaattcaattttattttttttagctaatttcgttcaattatatatataattaagggTAAGGGTAATTATACTAAgttcactaaatt + 45214_PtRNAdb chr-11.trna70-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 70 51994377 51994304 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TATGGTCTTTAACCGGCGTTGTTGAATTAAAGTGGGTTGCACAGAATTATAAAACAAGAAAGCCTAATAAATTGGATACCCATGAAAAACGCAGCAAGTT TTTCTCACACCATATTTTTCTGGTTTAATTTGAAGCCCAACTCGATCCAATATCAAAACTGACCCAACCCAATAACATTAacaatattttacatatatcg - 45215_PtRNAdb chr-11.trna71-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 71 51924944 51924871 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tatGGTCTTCAACCGGCGTTGTTGAATTTAAGTGGGTTGCATAGAATTATAAAACAAGAGAAGCCAATAAATAGCTTATGCAAGGAAAACATAGCAAGTT TTTCTcacaatttttttatggtttaattttGAAACCCAACTCGACCCAATATCAAAACTGACCTAACCCAATactaaaggaaaacaaaaaattaacaata - 45216_PtRNAdb chr-11.trna72-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 72 51907846 51907773 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tatGGTCATTAACCGGCGTTGTTGAATTAAAGTGGGTTGCATAGAATTATAAAACCAGAAAAGCCAATAAATACATTACGCATGAAAAACAATGCAAGTT TTTCTCagaaatttttatggtttaatttgaaaacattaacaatattttaccaataaaataataaatacataggaatttacaaaaattaacaaatttatta - 45217_PtRNAdb chr-11.trna74-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 74 50305927 50305855 Glu TTC 0 0 38.5 10.10 28.40 Inf His 53.9 IPD:-16.90 Phanerogamae -NA- Dicot GCCCCCATCGTCTAGCGGTtcAGGACACCTCTTTTTCAAGGAGGTAgCGGGGATTTGACTTCCCCTGGGGGTA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTACATAATGcaaatattgtaaaattgttcagttttatattgataatttcaaaaaaatgatcATACTATTAGCATAGTATGGTCGCAGTTAAGCAAGCAT GGGAACTACGAAAGGAAGTTGATCATGGATTATCAATAAACCTTGAATTGATTCTTTCTGGGTTGATTCCCGAGCGGTTAATAGGGGTAGACTGTAAATT - 45218_PtRNAdb chr-11.trna75-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 75 50305795 50305712 Tyr GTA 0 0 35.4 23.20 12.20 Inf Tyr 55.9 Phanerogamae -NA- Dicot GGGTTGATTCCCGAGCGGTtaATAGGGGTAGACTGTAAATTTGTTGGCAATATGtCTaCGCTGGTTCAAATCCAGCTCGGCCCA 84 >>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<..>>>...<<.<...>>>>>.......<<<<<<<<<<<<. TTTTCAAGGAGGTAGCGGGGATTTGACTTCCCCTGGGGGTAGGGAACTACGAAAGGAAGTTGATCATGGATTATCAATAAACCTTGAATTGATTCTTTCT ATAATTCACTGATCCACCATAACCTAAAATGCccatttttttgtattttttcccgaaaagccaaaaaaaattagggatgcataaaaaaaaattccaattg - 45219_PtRNAdb chr-11.trna77-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 77 49580769 49580698 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ATGATTCACTATTTTTAAAGCAGAGAGCTTGATTGTTATTGTTACATTTTCGCTTATTAATtccattatcaaattaaattattaataatttaatcaataa gtgaaaaatagattttatcCAAGtacaacttttttattattatttaaccgaaATTGCAAGCGGTGCTTACATAGTAAAACTTGAAAGACAATTGTTGCAG - 45220_PtRNAdb chr-11.trna78-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 78 47367965 47367892 Thr AGT 0 0 75.3 47.40 27.90 Inf Thr 89.8 Phanerogamae -NA- Dicot GCTCTTGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACAAGAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAAGACtaccaaaattttaatcaatagttttcttaattttaactCATCTAATGTGTtgatgagaaaaataaatataagtacAGGTTGACATTATCAGGCA ATTTGtgctttattttctattttgagtTCTGACATGTAATCTACTTAAGTTATGAATCTTTAAAATACTTTCGATTGGGCTCTCACCAAGGCTCTTGTAG - 45221_PtRNAdb chr-11.trna79-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 79 47367801 47367728 Thr AGT 0 0 73.7 48.30 25.40 Inf Thr 89.1 Phanerogamae -NA- Dicot GCTCTTGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACGAGAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AACAAGAGCAATTTGtgctttattttctattttgagtTCTGACATGTAATCTACTTAAGTTATGAATCTTTAAAATACTTTCGATTGGGCTCTCACCAAG AACtgtgttttattttctattttgagtTCAGACATGTAATCTACTTTAGTTATGAATCTTTAAATTACTTTCGATTGAGCTATCAACAAGGCTCTTGTAG - 45222_PtRNAdb chr-11.trna7-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 7 2348676 2348747 Asn GTT 0 0 53.4 38.30 15.10 Inf Asn 49.9 Phanerogamae -NA- Dicot TCCTCAGTAGCTTAGCGGTGGAGTGGTCGACTGTTAACTGACTGGtCGTAGGTTCGAATCCTACTTGAGGAG 72 >>>>>>>..>>>>.......<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. GAGACATGGAATGTGACCACTACAAAGAAGTTCTGAGGGTTACAAAGGAAATTTCAAGTTTATAGGAATTGAATTCTATGAGATTTAATCCTCCCGTTGT ATTTGATTCATTCCgaattaaagaattaagaatatCAGAGTGAAAGGACTCGCTTTAACCATTAAGAGCAGGTAACTTACATTTCtaatttacatttatt + 45223_PtRNAdb chr-11.trna80-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 80 47367637 47367564 Thr AGT 0 0 75.3 47.40 27.90 Inf Thr 89.8 Phanerogamae -NA- Dicot GCTCTTGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACAAGAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AACGAGAGCAAACtgtgttttattttctattttgagtTCAGACATGTAATCTACTTTAGTTATGAATCTTTAAATTACTTTCGATTGAGCTATCAACAAG accaaaataaaatagcatTCGATGATAACTTTAGgtctttttttttgtccttttaatGGAACCAATGATATGTGAAGGTGCTGCATTTGTTGATTAAATG - 45224_PtRNAdb chr-11.trna81-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 81 47115165 47115092 Thr AGT 0 0 75.3 47.40 27.90 Inf Thr 89.8 Phanerogamae -NA- Dicot GCTCTTGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACAAGAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CAGAGCCACTTTTGCTCATACATGTGCAAGGAATTCTGGAATAGAATAAATACTAGTCATAAGAATTTATATAAGCAAATAACCGAATTGATACCATCTG agatgtaatttattttctcttttgggGTCTTTAATTTACTTTCTATTAAGCTTCCACCAAGCCCTTTGTAGCTCGGCTGGTTAGAGCACCCGCTAGTTAA - 45225_PtRNAdb chr-11.trna82-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 82 47115030 47114957 Asn GTT 0 0 36.0 12.70 23.30 Inf Thr 40.1 IPD:-17.70 Phanerogamae -NA- Dicot CCCTTTGTAGCTCGGCTGGTtAGAGCACCCGCTAGTTAAGTGGGAGGtCTTGAGTTTGACTCTCAACAAGAAGA 74 >..>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<..<. GTAAGCGGGAGGTCTTGAGTTCGACTCTCAACAAGAGCaagatgtaatttattttctcttttgggGTCTTTAATTTACTTTCTATTAAGCTTCCACCAAG GCAAGGTGCTTTATATATCCTCTTTTGAGTTCTGACATGTAATCTACTTTAGTCATAAAACTTATGGTTCTTTTAATTACTTTCTATTAAGCTTTCAGCA - 45226_PtRNAdb chr-11.trna84-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 84 45301501 45301431 Gly CCC 0 0 66.0 29.20 36.80 Inf Gly 87.4 Phanerogamae -NA- Dicot GCGCATCTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGaCCGGGGTTCGATTCCCCGGATGCGCA 71 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tgacaATTAATTCTCTTTTTGCTTAAACATCTCTCTTTCTTTCCTCAAGGTTTTTTGTTactaaacttttaaataaacattcATAACACATATCAGCAAG AACTTGGCTTTTGTGCCCTCACTTGTACTTCTATGACTGTTAAATTTATACCAACACCTTAGTGGATCGGTTTCTAAAAgtcaatataaataattttatg - 45227_PtRNAdb chr-11.trna86-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 86 33849612 33849541 Asn GTT 0 0 45.2 36.50 8.70 Inf Cys 46.4 IPD:-2.40 Phanerogamae -NA- Dicot TCCTCAGTAGCTCAGGAGTAGAGCGGTCGACTGTTAACTGGCTGGtCGTAGGTTCAAATCTTACTTGAGGAG 72 >>>>>>>..>>>>.......<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. CTACGAAGAAGTTCCGGGGGTTACGAAGGAAACTTCGAGCTCATATTGGTCATGGGTTGAGAACGACAATTGAACTCTATGAGATCTAATCTCCCGTTGC ATTTGATTCATTCCGAATTAAAGAATTCAGAATGTCAGAATGAAAGGGTTCGCTTTGACCGTTAAGAGTAGGTAACCCGTTCCATGTGTCTTTGTTTCTA - 45228_PtRNAdb chr-11.trna8-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 8 2362619 2362691 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNataaaatttataaataaataaatccaaaatCACTTTTGAATCAACAT TTTtatcctccttttttttttgacctTTTTCAAACGTTAAAACGTTCTGTTAGTCCCTGTACTTAgacaaactttaaaatttagtctctgtaACATtatt + 45229_PtRNAdb chr-11.trna90-Ser-GGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 90 24281095 24281009 Ser GGA 0 0 55.5 32.40 23.10 Inf Ser 73.4 Phanerogamae -NA- Dicot GGAGAGATGGCCGAGTGGTtcAAGGCGTAGCATTGGAACTGCTATGTGGACTcTTGTTtACCAAGGGTTCAAATCCCTCTCTTTCCG 87 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<....<<..>>>>.......<<<<.<<<<<<<. gcAAGTTTCCTAGTTAGAATTGATATTGTTTGTAACTATCAAACAATCTAATATGAATAACTCGCTATTCGCTCGGGGTATCGGCCATAATAATTATGTA CACCTTCACCTAATTCGCCGATGTAACTTACTACAatgtatcaaatcaaataaGAACATATACTAAAGAATTAGACCCTTCTTTAGTATAGATTCTCTAT - 45230_PtRNAdb chr-11.trna91-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 91 22481185 22481114 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aaatatatatatctattctGAACGGGTTTTATAATTCATTGGAGCGGACCATTCTCAAGTCACGtttataaaacttaattttgaagtgATCCAACATAAT ttttttcatataaatagtCTAATTCTAGTTTTGGTCCCTTTAcaaaaattatgcaatttagtttttatattctaattttgCACAATTTGATCTCCTACTT - 45231_PtRNAdb chr-11.trna92-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 92 7987834 7987763 Cys GCA 0 0 81.9 59.40 22.50 Inf Cys 106.0 Phanerogamae -NA- Dicot GGGTTCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGAGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAATGCAGTAGAAAAGTtattccttcttttcttttcccttctaACATAGTAAGTTAAAATATACGCTATACAAAACTAGTTACCAAGATTTGTCCGAAAA ATTTTACATTAACAATTTTTAGTGCAAAATTCATTGGTATACTGCATAGCGGTGAACTGGTGATGGTAGTGAGATAAATTATAATGTGAAAGCAAAACTA - 45232_PtRNAdb chr-11.trna93-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 93 5003013 5002932 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. CTCTCCACCCAAAACTTTCTTCCTTTTCCCTAAAAGTTCTCATCAacattaacaataattatttgtattataaaaattatatatgaattgatCAAGCAAC tttgttttctttttccccaCTGATTTTGATAGTGCCatctgtttattttttcttttgctcaCATATATTTTAGAACTTGTATTGATTTCAATCTGTacta - 45233_PtRNAdb chr-11.trna94-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 94 4983213 4983132 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. tattttatattaagtagaattttaatataaaacttaatcgGTTTGAACGATAATTATTTCGagattatttttgaatattatattaGAATGTGACAAAAAT TCtttgttccttttattttactatcaGTAAAATCCAAAAactataaacatttttttttattttcttttcatcatattattttatttaaactccttaaatt - 45234_PtRNAdb chr-11.trna95-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 95 4980584 4980503 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. aaAACTTGAGTATAGAATATAATCAAACcgaatttgatttgtttcaacgataattattttaatgttatctataaatattatattggAAAGATGCAGTAAT tctctttttcctttttttttcccgtTGATTGAGAAATTCAAAATGCTTCTATGATGCAGAAGCCAAAAACAAAGGTTTTGGgcaagtttaaaaattgaac - 45235_PtRNAdb chr-11.trna96-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 96 4976956 4976875 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. GTAAagacaaaagaagaagaaccatctttatttaataagtatcAATGTGGTGAGGGGATTGTTTCATACTTAAACTTTAATGAACCACTAAGATGACAAT TCTTTTTTCCCGCTGATTTTGAGAATGTCATCgtttatattttctcttttgggctaaatctcaaatttatacatgaattttaatttaatatgtaattaga - 45236_PtRNAdb chr-11.trna97-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 97 4973787 4973706 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. TCATTCCAAtgaagaaatagaaaattatattcCCGTAAATTACTCATCATTAAGTATCAATGCGCGAAAGGAATAGCGTGATATATACTAGACGGAAAAT TCTCtttatcctttttttctttaacttttttatagCACACATGCAATGTGAAATGTGAAGATGACGAAATAGAAAATTCCTTTATATAATTACCAAATAA - 45237_PtRNAdb chr-11.trna98-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 98 3152410 3152338 Lys TTT 0 0 77.4 58.90 18.50 Inf Lys 81.2 Phanerogamae -NA- Dicot GCGGTCTTAGCTCAGCTGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTTGATTCCCACAGACGGCG 73 >>.>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. AACTTAAATTGCAAGATGTATACTAGCagataaaatttcacttttaccGAAATTAAGCTTTAATACTCAAAAAGGGTACTCAAGAAACTATTAAACCGTA ACAAGTTAGGATTTTTCTGTTACTTAAAATTGactttcatttccattttcatcttttagGTTATTTCTTAGATTCCCTTCCTTTCACTTTGAAAAGAAGA - 45238_PtRNAdb chr-11.trna99-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 99 3152081 3152009 Arg ACG 0 0 71.7 49.10 22.60 Inf Arg 91.4 Phanerogamae -NA- Dicot GACTCCATGGCCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGTGGAGTCG 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATCTACTAAGAGCGTGGTAATTGCGAGAACCAGGGAGAGAGAGGAAGATGACGGAAATTATGTatcaacaaataatttgaatatgatAACCTGATCGCGT acttttcatttttttaagttgcCGCTGCTAGGAAGAGCGCGGGAACCAGGCCAGGAGAGGAAGACGAGGAAAATTGCttatcaagaaaataataatataa - 45239_PtRNAdb chr-11.trna9-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-11 9 2428197 2428270 Ile TAT 0 0 85.2 69.50 15.70 Inf Ile 102.6 Phanerogamae -NA- Dicot GGTCCTGTAGCTCAGTTGGTtAGAGCGTTGGTCTTATGAGCCGAAGGtCGCGGGTTCGAGCCCCGCCAGGACCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTTATATTATCCATTAATGTTAAagcaaaaggaaagaaaaaaggtaTGTTTGcttaaacaatatatatataaagatgattagtttaacatttatcaataa TTTTTTGATACTTTTTCTCAGTCAACGGTTTATAAGTTACGCTAATCAACCCTATCATCATCACGGTCAAGTGGTCACCAGTACCTCGTTTTACCCGTTT + 45240_PtRNAdb chr-12.trna10-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 10 23448590 23448662 Lys TTT 0 0 89.6 66.00 23.60 Inf Lys 96.4 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCTCGACATCTAGGATGGAATAATAAATGGGCCGTCTCCGTTTGATCAGTGGGATAAAACATAGggatattaataattatatttatcaccTCAATCAGCA tctaatttatttgaatttgtaagtttttttaGCGAAAGGGAACACGCACGTTACCACTTTTAGTTTAAAAGCCCAGATCAATCTCTCCCACTATTTATTT + 45241_PtRNAdb chr-12.trna11-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 11 24549869 24549942 Met CAT 0 0 33.8 25.70 8.10 Inf Thr 37.0 IPD:-40.60 Phanerogamae -NA- Dicot GCATCCATGGTTGAATGGTtTAAGCACCCAACTCATAATTGACAAATtCGTAAGTTCAATTCCTACTGGATGCA 74 >>>>>>>..>>>..........<<<...>>>.......<<<........>>>.>.......<.<<<<<<<<<<. atgttgtttcATTGATTTCTTCTAAATTGCATTGAATTATCCTAaagattttatttcaattgGAATTTGATTATTTACTGTGTACGAGGATCCATGCTAA AACTAATGGGACTCTCTAATAAGTCTATTGTAATTAACTTTATATCAATGGATCTCATGCTTGAATGGTTTTACAGacaattaactcattttatggAAAT + 45242_PtRNAdb chr-12.trna12-Leu-CAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 12 25616423 25616501 Leu CAG 0 0 20.7 11.30 9.40 Inf Pro 34.9 IPD:-34.90,trunc_end:10 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTCAGATGCGAGAAGtCCCAAGTTCGAtttaaaaTACTTTTAAAACCCT 79 >>>..>>..>>>.........<<<.>>>>>.......<<<<<.......>>>..............<<<..<<..<<<. tcaatgtgaagtctataTTGTCactaagtcaataaatataatttcctaataattatatgcaatattcgcttcagggaatatgccaaaatcttcaaatgca TTTAATAAGAGTTTGGCATAATCAGTTAACTATCAAAAATAGTTGCCTAGGTCATGTATAGAAACAAGcttatattaaatataacaataaaagtcacata + 45243_PtRNAdb chr-12.trna14-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 14 26566857 26566929 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGGCGACTTTCTGATTTTGGATTCGTTGACTGTTAGTTTGTCATAGGCTTAAAGTAGATGTAGAAGTCGTGAATTTATATCTGCCAGCAGATATCAAAAT TCATGCCTTCCTTTTTCCCCTGTCGACCTCTCTGTTCGTGGCTGTAACTATAAAACAGCAGAACAAGGGTGCTGTAAAAAGGAGAGGTTGGACGTAAAAG + 45244_PtRNAdb chr-12.trna15-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 15 26627813 26627885 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gcGAACCGAACCGAACCTAGCAAACGGCCCATTTGGCGAATTTCTGATTTTGGATTCGTTGACGGTAAGTTTGTCATAGGCTTTAAATTGACGTCAAATT ttcttttgtatttttcggTTGCTTTTACTTTTCACCCTAAGCACGGTAAGTAAAGAAGGCAGGGAAAAAAGAGCTGCAAATATGTTGGAAATGGGAGTTT + 45245_PtRNAdb chr-12.trna16-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 16 29059687 29059767 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. atgcatatttagaaTGATGATGAATCTGTATAACTTAATGCTTGGTTTTTCAGCAAGCTTCTGTGGATAAAAAGATTTTAGTGTAAAGTGGTATCGCAAT TTTGGTTTTGTATTTTTACAATCAGACGAATATGAGCTTAACAAAGCCCAATCCCAGCTCTATTAATTGCTCTCCATACataatgcttttattttttatt + 45246_PtRNAdb chr-12.trna17-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 17 30621170 30621242 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TCgttaaaagtaatttaattatataaacagTTTGTTTAGTCGAAAACGTTTCTTATTTGAATATTAGTCAAAAATGGTAATGTGCGAGCTATTTCCAAAA gatttttgtcctttttttcttttttggtaaaatatgttgttagtccttgtactttaacaaactttgagatttagtccttaaacttaaaacttaaaaatta + 45247_PtRNAdb chr-12.trna18-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 18 30673757 30673829 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TGGCACCTTTGCTTGGAGTGACTTTCCTACGGTTGTTTGACAAGGAAACATGcgtttttatttaacatatgaaaatataaatgatgCTATAATATCAAGA ATCCCTTTTATGTTTTGACCTTTCtggtttgttttaaaaaaaattatccttttATGTCTAATATGATAAACAGAGCTGAAACATGATGAAAATATACAAG + 45248_PtRNAdb chr-12.trna19-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 19 30680884 30680956 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ACTCCGCCACTTTGGGGGTATCTAACATCATAGACTTCAATAGTTTTTCCATAGCATTTTGGAATgtgttaaatataataatgacgCAAGGAAGTCAAGA gtttttttttttaactttggaCCGTTTTTGAGTTTTTGTAGTCCTTTGGGCTTTATCTGCTCTATTTGTTGaccatttttcatttaaaaaaaaaaaaaaa + 45249_PtRNAdb chr-12.trna1-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 1 772107 772197 Tyr GTA 772144 772161 74.3 42.80 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>.........................<<<<<.....>>>>>.......<<<<<<<<<<<<. AAACATGTACAATTCTTTCTCAACAATTAAATCTTTTCTTTCAAATAATTTCcatatcattttattaattataataatttataatatcattgTCAGTTAG TCTACTGTCTTTTACACTTCTCTAACAGAataggttaaattctgctattagtccctGTTTTATGCCATAAGTTGTGAGTTTAATCCCTATGCTTTCTTta + 45250_PtRNAdb chr-12.trna20-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 20 30684118 30684190 Glu CTC 0 0 53.8 30.80 23.00 Inf Glu 67.6 Phanerogamae -NA- Dicot TCCGTTGTAGTCTGGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTTCCGGCAACGAAT 73 >.>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<.<. TAAGTTTTTCAAATTAGGCACTTAGCAGCAACCTGTAATGTAATAAACTTTTGCATAAGTAATTGGAGTTTAACCATCTATTGTATTACAGCGTCAGAAA CCTTTTTggcctttttattttcttttggtaaaatttattgttagtccttataatttgataaaaattgagatttaatccttatgcttaaaaggttaaaatt + 45251_PtRNAdb chr-12.trna21-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 21 30686680 30686752 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTTAAGATTGATGTCAAAAATATTAGTTTAGAAAAGAGTTGAAAATATGCTGGTTCTTATATTTATGTCAAAAACCTAAATATAGGCACATCGAACATAT gttttaattttggacCCTTTTGAGCCCTTTGGGCTTTTCTGCTCGGTTAGTTTGTTGAtgtttccatttcttttaagttaaaatatgcctattgtccttg + 45252_PtRNAdb chr-12.trna22-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 22 30688714 30688786 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTGAAACCGTTCAAATATACAATGTTCTATTAATCTAGAAAAGAGGTGAAAGTATGTTGTCCTttggttatatatattaaagcatCCACGCTTCTCAAGA TTAAATTTTCCTTTCTGCGAtctgtttgtttattttttatttttactttggCCTTTGTCTGGCTCTCTTTTTTTGCCTTTGAATACAATGCCATTTGAAA + 45253_PtRNAdb chr-12.trna24-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 24 32154134 32154205 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAAACAGATCACAAACAGACGCTTGATTATCATGTCGGAAATTCTCAACATGAAAACAATACAACCTACAAGGCTTGTTATATACAGCTAACCATATATA atttttcttttttttttttcttcagatCCATTTATTCTCTGTCAAGATTCCTCTGCAGTGCCAGtgagtaaaataatatataaattctgTCCTTTCAGAA + 45254_PtRNAdb chr-12.trna25-Pro-CGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 25 32154724 32154795 Pro CGG 0 0 68.4 35.70 32.70 Inf Pro 111.1 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gaaattcaTAATCTATAGATGGTTTGCCTTCTATTGCATATTTATATTCtgaattaacaaataaataaattaaaatcatacatCACAGGAATCAAAATCA TGATTTGTTATTTTGCAAGAGGAAAGACCAAAGTTCTATTCTCGCTTAGGCAAGAGGAATctgggttctttttttttttttgtataattaacattttaaa + 45255_PtRNAdb chr-12.trna26-Pro-CGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 26 32154935 32155006 Pro CGG 0 0 64.1 34.40 29.70 Inf Pro 107.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGtCCTGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCTCGCTTAGGCAAGAGGAATctgggttctttttttttttttgtataattaacattttaaagcATTAGAAAAAAAGAATCTAGACCAAATCTTGGTGATT ATTTCattctccttctctttttttgtaattaGGGAAGAGGAAGCAAGCAGGAAAACTAGTGAATGAGAAAAGCCAAGTCCAGTTTTGGATCAGCACAGAA + 45256_PtRNAdb chr-12.trna27-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 27 32155409 32155480 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AACTTGCTGATAAGTGACCATCTAGTCATCAAATTTTAGCAGGATCTTGAAAAATAAACAGCTAATAACAAGAACCAAGTCAGAGGAAGCATCAAAAGTT taaaataagatttatttttgttttccatttttttcccttAGCTAAATTTTACAACTTGAAATAATTGATTATCAGTACAATCTCAAGTCAACTTCTATAC + 45257_PtRNAdb chr-12.trna28-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 28 32158466 32158539 Asn GTT 0 0 81.8 56.30 25.50 Inf Asn 94.2 Phanerogamae -NA- Dicot GCTGGAGTAGCTCAGTCGGTtAGAGCGTATGGCTGTTAACCATAAGGtCGGAGGTTCGACCCCTCCCTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gtatattctaTTTATCAGTATTACTTTGATTTTTGAATAATCAGCAAAATTACATAGccttatattatattaaaataaataattagccAGTAAACAACCA TTTTTacattctttctattttttgggtttttgcgTTTCACGTTTTCTGGGCTGCGTTTTTACcttcttttcacttttttggGCCATCAACCTTCTGAAAT + 45258_PtRNAdb chr-12.trna29-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 29 34298700 34298787 Ser GCT 34298738 34298753 35.0 29.10 5.90 Inf Ser 41.6 Phanerogamae -NA- Dicot GGAGAGATGGCTGAGTGTAatAAAGCATTGGATTGCTAATTCGTACCGAGGGTTCAAATCCCTCTCTTTCCG 72 >>>>>>>..>>>...........<<<..>>>>.......................<<<<....>>>>>.......<<<<<<<<<<<<. atatagataaataataatctatataacaaagtaaaaaagggcttttttcAAGCCTCTCTTTTTGCGTGCTGTAACATAGTAATTATCTTTTTCTCAATTA TTCGGTTTTTGGTAGTGGAATAGATCAAACCTAATACCATTTCTAAAAATGAAGCAAGGAACTCTCCCTTTCTTATTCTTTGCGTCCAGGATTACGTCCC + 45259_PtRNAdb chr-12.trna2-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 2 781106 781196 Tyr GTA 781143 781160 74.3 42.80 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>.........................<<<<<.....>>>>>.......<<<<<<<<<<<<. aataaaaaaaagttaaatacgTCATGTAAGTATTTATTATCCAAATAAGTTCCATAtctgtttattaattaaaatgttctATAACCCCATTACCAATTAA TAttgcctttttttttacaatttatttaaaagaataggttaaattttgcttttagtccctatactttacttggtactttttcaaattttaaagttgCTTT + 45260_PtRNAdb chr-12.trna30-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 30 34573077 34573158 Ser TGA 0 0 78.3 44.40 33.90 Inf Ser 115.8 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTTGAAATCTGTTGGGCTACGCCCGCGCAGGTTCGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. agtttagtgaacTTAgctgtagtttacccaaaagtggaataataataaaaatgataatggTAATGGTGATAAAGATATTTTAAGCCAACATGACATTAAG ctttttattttttcattttaataaataaaacttttttaattacttgCATAATttccaatatatataaataattaaatagaaaaataatgtattatGTGGT + 45261_PtRNAdb chr-12.trna31-Thr-CGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 31 35297064 35297135 Thr CGT 0 0 77.2 58.30 18.90 Inf Thr 76.8 Phanerogamae -NA- Dicot GCCTTTGTAGCATAGTGGTAGCGCGTTCGCTTCGTAAGCGAAAGGtCGCGAGTTCGATCCTCGCCAGAGGCT 72 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGGCAAAGGAGTTATATTTCGTTGTGAATGATGTAGTTAAAAGGCCCAAAATGAATTTGGGTttggatttttaaattaatagagAAACGTGCAGGCAGAT tatattataattttttaaaaggtttaaaatatgttaaatctttatattttaataaaatttgcaatttagtctcctcaaattttgtttatttaaaatttta + 45262_PtRNAdb chr-12.trna32-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 32 35298366 35298439 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTATTCGgatattgatataaaatatgatttagttAATTATCTTTGGGTTTGATCTACACTATAAGTAAAATATCTTAACATTATAATTTGTAGTGAAGCG ttttattaagattttagaaatttcaaaaattctagAATGCACCATgttagccttttttttttatgtataaattttaaaaatacataataatatataaaaa + 45263_PtRNAdb chr-12.trna33-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 33 33976323 33976251 Lys TTT 0 0 89.6 66.00 23.60 Inf Lys 96.4 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATATCAACTACAAGAGACCAGACTGCAAGTCTATAATTACGATATGGTAACCAACaattgttttcaaattattattcaatttaaagaGAGCCTGGGAGTA ccatttatttaatttttcataagcacgcgcacttttttttttacaccgcgaatataatttttatgcaCACGTGCAATTTTTTTACACCACAGAATAttac - 45264_PtRNAdb chr-12.trna37-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 37 32938229 32938158 Gln CTG 0 0 74.3 49.60 24.70 Inf Gln 103.3 Phanerogamae -NA- Dicot GGTTCCATGGTCTAGTGGTcAGGACATTGGACTCTGAATCCAGTAaCCCGAGTTCAAATCTCGGTGGAACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ttttatattaaacAAACCCAAAACCATATTGCCATAATTTTAGATCTTCATTGTATATTATGTACTTAAAGAAATATATTGAACGTTCATAACAACAAGT tatcttctttttgtttttcttccatCGAAGTTCAATTACAGATACATTGAAATAACatactataattttatttgttgcaTCAAGGAACTCAATTTAAATT - 45265_PtRNAdb chr-12.trna38-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 38 32760116 32760033 Leu CAA 0 0 80.3 52.20 28.10 Inf Leu 124.8 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTTCTCGTTAGAGAGCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. TAAATGCTGCAAACCAAGGTTGTGAATTGTTACTTGAGAAAGTGGCTTCCTTTttgtgttctttgttttatattttaatgtttagttgTTAGATAAAGAG tttttcaatttcattttgcCCCACAATTCTCTTAGCTGTTTTTGGAATATGATCTAGTGCTGGTTTAAAAAGATTTTGGTAGAAGTATCATAGAAGTCCC - 45266_PtRNAdb chr-12.trna39-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 39 30662265 30662193 Glu CTC 0 0 66.0 46.70 19.30 Inf Glu 89.2 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCAGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>.>>.......<<.<<<<<<<<<. CGGAATCAGTAATCTGAACCTAGTGAGATATTTTTAGTggaaaaccattttttatttaaatattagtacAAAAGTATTATTTGCCCGAAAATTGACGAAA gtcctttttttttttggaccgtTTTTGACTTTTAGGAGCCCTTTGGATTTTATCTGCTCTATTTGTTGATGTTTCCATTTTTACGGTTAAATGGCATTAG - 45267_PtRNAdb chr-12.trna3-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 3 1927389 1927461 Arg ACG 0 0 71.7 49.10 22.60 Inf Arg 91.4 Phanerogamae -NA- Dicot GACTCCATGGCCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGTGGAGTCG 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tGGGAAAGAATTCTAGTTTCTCTGGTTTGGTTTGTCTATGCATCTTGCTGAcatcaacatatttaataaatatgagtATACTCGTCGTCGGTGCAACAAG ctgTTTATCTAAAAGTTTTGGCCCCCAATAGACGACAACAAGAGCCAGGCCTTAAGGTGTCATATTTTTAGGCCGACAGCCATCAAAACTGAAGTCTACA + 45268_PtRNAdb chr-12.trna40-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 40 30659304 30659232 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GTtgcatcaaattaaaattaatatatcaaattacacattaaattatAGTAAGATCTTTGAATATTAGTTAAAAAGTAAAATGCGAGAATCATTTGCAAAA ATTGttttctatatatttaaaactttggGCAGTTTTTGACTTTTTGAGCCCTTTGGGCTTTATCTGCTCTGTTTGTCGATGTGTGTACCCATTTGTTTAC - 45269_PtRNAdb chr-12.trna41-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 41 30637476 30637404 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. atacatcatttaagatCTATGTCGAAAATATTTGTTCGAAAAAGAGGTGAAAATATAATGGCTAGTTTCACAATGTTTAATATgtagaaaaatttcaaaa GTCCCCTTATTGGACTGTTTTTGACTTTTGAGCCCTTTGGGCTTTATCTGCTCTGTTTTACGAaccatttttcatttaaaagaaagggtaaatatacatt - 45270_PtRNAdb chr-12.trna42-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 42 30039536 30039465 Asp GTC 0 0 67.8 44.80 23.00 Inf Asp 92.9 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGCGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTCGATCCCGGGCAACGGCGATCTATCCTTTGGTTTATATTTTCTGACAATCTAAAgtaatttataacaaataatataatttcgaAATTATGACATCGAA tTTTCGtatttttcctttcctttttgcCTCTCCATCCTAAGCACTTTCCTCCGCTTTATCTACAGCAAAAACACCTCCTTTTTTCAATGAATCATTTTTT - 45271_PtRNAdb chr-12.trna43-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 43 29596986 29596916 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GGTTCGAATGCAGCAGGATGTTAGTAGATTACGATACAGAATATGCATGTcggaagaaaaatgaaaaaatattataaacttcgAGAGAGCACAGCGGGCA tgatttgtttcttttgctttttgGGCTTTCTATGTGTGCCAAAAGCCCATTGCTGGTGGGTACATCTGGTTGGCTCCAAAGTTCAAACTGGATCTACCAA - 45272_PtRNAdb chr-12.trna44-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 44 29053275 29053195 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. ttatattaatatatgcatatttagaaTGATGATGACTCTGCATAACTCAAGTGGTTGGTTTTTCAACAGGCCTTAGTTAGTGCAAAACATTCAACGAAGC TTTCTATTTTGTGTTTACAGACAGACAAAGTTGGTTTAGAGCTCATTCCCTATGAGGCCTGCAAACTCAGCCCACCTCCTCTCACACTTTTCAGTAtttc - 45273_PtRNAdb chr-12.trna45-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 45 28744329 28744249 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. tgcatatttagtTAGAAGGATAAATCTGCATAACCTAAATGGTTAATTTTTCAGTCGGTTTTATAGATAAATGAATTTATTGTATAAAAGGTATCGGAAA ATTGGTTTTGTATTTTTACAATCAGACGAATATGAGCTTAAGAAAGCCCATTCCTTATTAGGGGCTTAGGCCTGCAAACTCAGCCCAATCCCAGCTCTAC - 45274_PtRNAdb chr-12.trna46-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 46 28740232 28740152 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. tttaGAAGGATGAATCTCCATAACTTAAATGTTTGCTTCGTCTCagtttttcagaaaattttatagttaagtattttaattgtataaaCAGCAACAAAAG TTTCGTTTAGTATTTTTACAATCAGATGAATATGAGCTTAACAAAGCCCATTCCTTATTAGGAGGTTAGGCCTGAAAACTTAGCCCAATCCCAGCTCTAT - 45275_PtRNAdb chr-12.trna47-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 47 28395051 28394980 Gln TTG 0 0 73.5 53.70 19.80 Inf Gln 104.8 Phanerogamae -NA- Dicot GGTTCTATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTAGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TCCGATCACTAACTTGCAGAGTATTCTTATTCCCACTGAAAATCTTTTTGTTTCCTCTAGTTTGGttctaaattgtaatttatattttcttagcATCACC tttttgtttgattaatgCAAATcaaagattattattttatgacaCTTTGGTGTTTAAATGACCTTATGAAAAATGGTACAAACTTTACCTtaaaatgtga - 45276_PtRNAdb chr-12.trna48-Ser-CGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 48 27215303 27215222 Ser CGA 0 0 78.0 45.60 32.40 Inf Ser 118.6 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTCGAAATCTGTTGGGCATTGCCTGCGCAGGTTCGAATCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. GAATCCCTCCATTCTCTAGGTTTTTGGTACTCCTTTCTTCAAATTTGAGCCAAGAGTGAAAAAGATTATTGCTTAAATATATTCGTGAAAGGTCAAAAGT AAacgtttttattattaatccacttttggtataatgataaatttaatcctcaagCAAAATGCTCCGTAGATCCACATCGAAAACAAGCTCGAGTTAGCTC - 45277_PtRNAdb chr-12.trna49-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 49 26845185 26845113 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGATCACTAAGATGACTGCAATTACACACTCTGTTGACAGATCACCGATATTAATCCATGAATAGCATTATAATGTAACTTGTTAAGAACTAAGCCCAAC tttttaaattttttggctTAATTATCATTTAGTCTCTTTACTACTTTGAGATTTGGTCCCTTGGtccttatattatatttaaccaATAATGGTTAGCCCA - 45278_PtRNAdb chr-12.trna50-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 50 24215392 24215319 Val CAC 0 0 81.8 53.80 28.00 Inf Val 103.4 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCGAGCCCGGGCTCAGACA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCTCATAAAAGGATCCTCATCTTCTCCCTATGGACATCCTAAATCAAATGCCAACAATCCgtggttatatataatataagttaAAGCTAGCACAAAGGTT TGGCAATCAACTTTCGTTTTGCCTTTCACAATCACTGAAGCCAAACCTTCCAAATTCCTTCACGGTtaagcatttttcatttttaaaataccaTTTTGTT - 45279_PtRNAdb chr-12.trna53-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 53 14633773 14633692 Ser TGA 0 0 76.8 44.10 32.70 Inf Ser 113.8 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTTGAAATCTGTTGGGCTGCGCCCGCGCAGGTTCGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. gccgggccaccccggcccatggacaggtctaccaTGCAATAGCATTCATAATTTGTTTTAACaggtaaaataaatgaaaataaagtacTTGTCGTCTTAT gtttttttaattttatgttctttaatgGACCAGGCCAGGCTTTATCCCATCCAACACATTTCTGGGgcctttttaactaatttataatGTGTTTCTTTCT - 45280_PtRNAdb chr-12.trna54-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 54 14519242 14519158 Leu CAA 0 0 42.6 27.20 15.40 Inf Arg 32.2 IPD:-17.10 Phanerogamae -NA- Dicot GCCTTGGTGGTGAAATGGTaGACACGCgagcGAGACTCAAAATCTCTTGCTAAAGAGCGTGGAGGTTCGAGTCCTCTTTAAGGCA 85 >>>>>>>..>>>..........<<<......>>>>.......<<<<..>>>....<<<..>>>>>.......<<<<<<<<<<<<. CCAATCAATAGGAATACTCCAAGACTCCATATTTGTCATATATTTCATACATCACACTAGATAGATATCATATTCATGGAATACGATTCACTTTCAAGAT TAATATTGAGAATGCTCGTTGAATTGGAATAAGTTCAGCAGCGGATCACGAGATCTTGGTGATCTTCTCTATCTAATGAATGGGGAGTCCGCTTTGAAAT - 45281_PtRNAdb chr-12.trna55-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 55 11519664 11519592 Arg CCT 0 0 72.6 51.90 20.70 Inf Arg 83.4 Phanerogamae -NA- Dicot GCGCCTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAGGtCATAGGTTCGACCCCTATCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. ttaaaagttcaaaatatcTTATTCGAGTTACCAAAACAATAGATCTTACTCTTTGTATTTTCAAGGTAAAATGGTTTTAATAACCTCGTCTTTCAATAAA cgttaccttttttattttgttatattatatgGTGAAATTCATTTGTCGTAAAAttagcattttttatttatttaaataattaatgaattaatctgtattg - 45282_PtRNAdb chr-12.trna56-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 56 10307422 10307351 Cys GCA 0 0 81.3 60.10 21.20 Inf Cys 109.8 Phanerogamae -NA- Dicot GGGCCTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCTCTAAAAAAGGTTTGAAGTGATAAGATAGGTTGAAATTTGATTCACATATAAATTTAGAGTCTATATAAGTGTTAATACAGCCAGAAAAGAACAACTA CAATAATAAGCATCTTGATTCCAATTTTAGATGCCGTATGTGCTTGCACTGCTCATTCGTACTATCATTCCACATTGCATCTTCAATGAGAATGCTATAA - 45283_PtRNAdb chr-12.trna57-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 57 5782254 5782181 Ile AAT 0 0 82.4 58.90 23.50 Inf Ile 107.0 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAAACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AATAAGTAGAATTGAACAATTTGCCAATACGCAACTTTGTTTTccattacctttttttttatttctacatATAAAGCATAAATTCAAAAGGGTCGCAAAT CTGTTAtttgtttttcccttttacgattttttaaatacatatatttattccGCTTTCTGCTCATTCGATACCTGCATGGGCCACTGCACATTTCACTTGG - 45284_PtRNAdb chr-12.trna59-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 59 2392781 2392704 Gly GCC 0 0 48.6 34.00 14.60 Inf Gly 74.1 Phanerogamae -NA- Dicot GAACCAGTGGTCTAGTGGTAGGATAGTACCCTGCCACGGTACGGaCCCGAGTTCGATTCCCGGCTGGTgtaacctTCA 78 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>.>.......<.<<<<<<<<.......<<. ATAATCTAACATTTCTCAAAAATCTTTCTTCATTTACCCATCTAcaacattgaattttatttcaataaataaaccTATTGTTAATATTTCTCGTCAACAA ATGAAGCTGTGACGATAGCTGCGCTCAAGCGAAGATTGGGTTCTTCGCAATCGTCTGATTCCAAGACGATATCAACTGCGCTTCTGAGcttcttgatttt - 45285_PtRNAdb chr-12.trna5-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 5 4580609 4580680 Gln TTG 0 0 73.5 53.70 19.80 Inf Gln 104.8 Phanerogamae -NA- Dicot GGTTCTATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTAGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aacgaAATGAGTTATCACTGTCACCTGCTATGTGAAGATAGTTAGCGAGTAACTTATTCTAGCATTAAATAAAGTGCTGAGATAAACTTTTCAACACGGG tttttttcatctttaatctttttaaaaggGAAAAGGAATTCCATGGTCAGGATCCCGCTTCATTGTGTTGTGATTTCTGTTAACCAACacggaatgtaat + 45286_PtRNAdb chr-12.trna60-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 60 2390110 2390040 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. catttctcaaaaaaaaattcatttacctaatcatctgtaatattgaattttattttaataaacgcAACCTATAGTTAATATTTCTCCCCTATCTCAACAA ACCTTCGTAGAAGCTGTGATGACACCTGCGCTCAAGCGGAGCTTGGGTTCTTCGTAATTGTCTGATTTCAAGACGATATCGACGGCGCTTCTGAGCTTCT - 45287_PtRNAdb chr-12.trna61-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 61 923339 923266 Met CAT 0 0 28.2 18.90 9.30 Inf Thr 27.4 IPD:-25.00 Phanerogamae -NA- Dicot GTATCCATGGCTGAATAGTtAAAGCATTTAACTCATAATTggTGAATtCGTAGGTTTAATTCTTACTGGATGCA 74 >>>>>>>..>>>..........<<<.>>.>>.......<<...<<....>>>>>.......<<<<<<<<<<<<. accaaaatattatattctcTACTACATTTTtcacttataaaatatattcttatgaacttttataatttggttATTCATAATGTATGAGGATACCCGCTAA TGCGAATGAGACCTTCCAATAAGTTTATTAGAATTGGTTCTGTATCAATGGAATCTCATCATTTATACATATCGAATTGGTGTGGTATATTCATATCATA - 45288_PtRNAdb chr-12.trna62-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 62 383435 383364 Glu TTC 0 0 66.3 48.30 18.00 Inf Glu 91.3 Phanerogamae -NA- Dicot TCCATTGTCGCCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>.>>........<<.<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ttattcttttacgatttagttcctgaaatctaaatttttacTAGTCTACAATTTAATTCCTCATAAACAAATGTTTACAATTTTGCTTAGCAGCATACAT aatttaaattttcattttagtctaaCAGATCATGATTGCATTAATGCATTATTATTAACTAACCggactttattttttcttaattattataaaataacta - 45289_PtRNAdb chr-12.trna6-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 6 4581469 4581540 Gln TTG 0 0 73.5 53.70 19.80 Inf Gln 104.8 Phanerogamae -NA- Dicot GGTTCTATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTAGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CATCTGCTATTTATTGGGTAGTCCTCCTTTGACTATAGATTTTGATTTCTCTaatgattttattgaatatataaGATAAACCTTCACTTCCCATTGTTAA TTTTCATCTTTAACTTTTTTACAAGTTAGAATTATTTAAGAGCAATGGAAAAATATCCAGTGCTCATTTTCTACAGTACAAGCCTAAATATTAGAGGGAC + 45290_PtRNAdb chr-12.trna7-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 7 6444766 6444855 Tyr GTA 6444803 6444819 74.3 42.80 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>........................<<<<<.....>>>>>.......<<<<<<<<<<<<. accccaatttctattataataataaatattattcaaaatataaattcatataattttttatcctcAGATGTATGAAACAATAAGCAACAATGACATCAAT TTTTTTTCCCACTTAATTCCTTTTGGGTAATTCCATCAGCAGTCCCTAAACTTTAATTGAAATTACTCCTTGGTCACTAACttctaaaaattacatatta + 45291_PtRNAdb chr-12.trna8-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 8 7523840 7523912 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGCAAAGGAAGCTGAGATAGGCGAAATAGCAATGACCATATAGAAGAcaacaaacataaataaaatttatttaatatagtttttaaagaTACAGAAAAGA CAATATGTTGTTTCGTACaactttattgtttattgttttgggtCGCAAAATCTGGTTTTCTACTGATATTGGTCTCTGGGCTTTTCggccttttatttct + 45292_PtRNAdb chr-12.trna9-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-12 9 22266754 22266825 Ala TGC 0 0 38.6 22.30 16.30 Inf Ala 71.5 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAACGGTAGAGCGCCGCTTTGCATGCGAgAGGtACGGGGTTCGGTACCCCGCATCTCCA 72 >>>>>>>..>>>>........<<<<..>>>.......<<<.......>>>>>.......<<<<<<<<<<<<. GAGACTGAAATTTCTCTACGGCAATTCTTCTGAGTGGAGACATTTTATAGATCCAATTCACTTTCcgatataattattttaagccTCAATCCAAAGATTA CTCTTGCTCTATTTTGCAAATCTCTTTctatactattttattattaaaaagattaatacaacatttagtaattaaatcaactattttttttcttatttta + 45293_PtRNAdb chr-13.trna10-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 10 1666489 1666560 Cys GCA 0 0 82.1 59.90 22.20 Inf Cys 106.6 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CGAACCCGGTTGGGCCCTgcttttacttaattttgcCAAGTCCGTCCTAAACTTCCATAGTTTATACATGTAGTAACCAAAGTAAAACTGCTTCTCAATG ctatattttttaaatagttgcgaaagattaaaaaattaagaataaaaaattccaGTTAACTTTGTAATCTCTCGATTTTTTTATTGCTCCTTTTCAATCA + 45294_PtRNAdb chr-13.trna11-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 11 1667329 1667400 Cys GCA 0 0 82.1 59.90 22.20 Inf Cys 106.6 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAAAGCTTTTCAAAAagcatttttaaattataaatttttgccAAGTCCGTCCTTCCATTCTTTATACATGTAGCAACCAAAGTAAAATAACGTCTCAAAG aatttttaattatatatttttgccAAGTCTGCCCTTCGATACATTGTACACGTAAATTAAAATCCATAGCTCAGTGGTAAGAGTATTTGGCTGCATATTA + 45295_PtRNAdb chr-13.trna12-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 12 2301967 2302039 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. cGATATTATAAAAGAATGAGTCGAGTGATGTTGTTATACGACATGTCGTCTTAACTTGATATAATGATCTAAAATCCCTTAATTTCTATATGTCAACAAG ACTgtgttacaatttttattttaatacgttattcattttctttaattcccTTCCTATATAATCgtgtatgaaaattttaataaattactaGCATTAGGTC + 45296_PtRNAdb chr-13.trna14-Arg-TCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 14 3117659 3117732 Arg TCG 0 0 78.4 58.60 19.80 Inf Arg 91.2 Phanerogamae -NA- Dicot GACCGCATAGCGCAGTGGAttAGCGCGTCTGACTTCGGATCAGAAGGtCGTGGGTTCGACTCCCATTGTGGTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTATGCATTTACATATGTAGACGTTCTTGCACGAGagataaataatattagaatttaaaaaagtataaaagctTTTACTCTAACCGTTCCTCTCAACTAA TTTGATTGTTTTTTGTTTATTCTAATTTTACTGCCTCTATGATGCTAAAATTTGAGCtactttaattttacttaatttagcCCCTTTATTTATGGATAgt + 45297_PtRNAdb chr-13.trna15-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 15 4325942 4326014 Met CAT 0 0 39.7 21.90 17.80 Inf Thr 48.1 IPD:-28.00 Phanerogamae -NA- Dicot ACCTACTTAACTCAGCGGTtAGAGTATTGCTTTCATACGGCGGGAGtCATTGGTTCAAATCCAATAGTATGTA 73 >>.>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. TCGGTTTGATTGGTATTGCTTAGAAGTAATATTGGATTTATAATCCATCGATGTAATATGtccccttttctttctctttatgATTCCTATGATATAAATG GAACTTATTAGATACCATCGATCCTGATGTCTATAGTTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN + 45298_PtRNAdb chr-13.trna16-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 16 15359623 15359696 Asn GTT 0 0 82.2 55.30 26.90 Inf Asn 91.0 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCAGAGGTTCAAGCCCTCTTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGACTTCTCTTTCTATTGACTGATGTGGTAGACGATACATGAATATAACTTTTTGTATGTTAAATGGATATGTAAGGCTTTATCATAATTACACGTGCTT ATTCTAATTTTTTCCTCTCTAATAACCATGTTGTGCATACTGGTTTCTCTGACCATCacttgttattttcttttccatatttttaatgTCTTTCTCATGC + 45299_PtRNAdb chr-13.trna18-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 18 18948779 18948851 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. tcgttaccaaaattaaatatatcaattaagaTATATAAGGATGCAAATTTGTCTACGAAATATACGCTAAATAGAGATATTTGGAAGAATATGACACCTT AAAattgttttgtgttctttggATTGATATGATAAAGaaacattattaatatgttaaaataaaaacattcattaatcTCTTTAGCTACATATATTATTGA + 45300_PtRNAdb chr-13.trna19-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 19 19077734 19077805 His GTG 0 0 58.7 29.70 29.00 Inf His 81.3 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGGGGTaAGAATTCTACGTTGTGGCCGTAGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTAAACTTGAGTAACTAATAATATGATATAGTTGGAGGATttgaaattaagaaataatataaaagaatataaactGTACATGCTTAAAACATCACATCTT TCAAGTTCTATTTTTTCCCCCTCTGTAGTTGTTGCTTTTAATCAAGGCAGCATTCTTGCTGACCATTGCTCTGCTAACTCTATCACAGTATATGGTTAAG + 45301_PtRNAdb chr-13.trna1-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 1 1569372 1569443 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AGAGTACCCCAATTTGAAACACAAAGGACCAACCTTTTGATTCGTGCAACTGTTAATTCAAAAGAACATTACTGTTCTTATTAAATCCACTAAACAACGA tctctttaaatttttttgctgTCCTTTCTGTTTCCGACACGTGGCACAAACCCACCAgcgtttttttctttctttttcattttataaatcggttaatttt + 45302_PtRNAdb chr-13.trna20-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 20 30703847 30703917 Gly GCC 0 0 56.8 35.00 21.80 Inf Gly 85.5 Phanerogamae -NA- Dicot GCACCAGTGGTCTCGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gtaaatgatAAAGGCTAAATTTGAGTATAGCTACTCATATGTATACAAAACAAGATCtaaaatcaattattaaattcGATTAGTCCTTTGCTAGCAGGAT ATAATTTctcgttttttttatttttctttcgagtgaaaaataaaaaatgtaactGCCAAGTAGGAAGCTACAATTGGACAACGTTTTGACGTTCGGTTAG + 45303_PtRNAdb chr-13.trna22-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 22 33252945 33253018 Thr AGT 0 0 63.7 38.60 25.10 Inf Thr 78.2 Phanerogamae -NA- Dicot GCTTTCGTAGCTCAGTTAGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCAACTCTCAATGAAAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAATATGTATAGCCTAGCAATCTGTTATTTTGCATTACAGTTCATGGTCAActgcaaattttttttgtattataagTTATTTTCGATGTTAAAGTCCACT TTTCTCTGTTTGGAATTTTTTGTTCCTTATAATTATTCGTAGCCTGCAGAGGTTAAAGTTTATCTATAACttaattacctttttatttaaaaatttcaat + 45304_PtRNAdb chr-13.trna23-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 23 39339132 39339209 Glu CTC 0 0 42.8 29.60 13.20 Inf Glu 54.5 trunc_start:1 Phanerogamae -NA- Dicot CCCTTGTAGTCTAGTTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCTGGGTTCAAGTTCCGGCAATGttttgcttA 78 .>.>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<.<......... TAATGCTATCTTTTGCAAACCCTGCTTACCACCCTctaaaaatgacaaataattaataaattgataaaaacaaaaataaaaatagtctTACATCATCAAT ttttgttctttttccccATTTTgcttgcttttatttttgtttgtttgtttttttttctcattttgctTGCTTACTCTGTTACTGGTATGGGTTTTTGTTA + 45305_PtRNAdb chr-13.trna27-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 27 48292093 48292164 Cys GCA 0 0 82.1 59.90 22.20 Inf Cys 106.6 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aagTGTTATATTTTTAACCATAGAATAGTGAATATCTTTCAACAAatctttttatcatttcaaaagatatattaaattaacaaagaaaatatcaaCAAAT cttttttttccaatttataTGTGTTAATATCTTACATAATTTCTCTCTCGTTTACGCTAATCTCATTCATTCGATCCCGgatagagaataaaaaaaacta + 45306_PtRNAdb chr-13.trna28-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 28 51953494 51953573 Leu TAG 0 0 65.3 44.40 20.90 Inf Leu 102.3 Phanerogamae -NA- Dicot GACAGTTTGGCCGAGTGGTctAAGGCGCCAGATTTAGGCTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACAGCTGTCC 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. CTGGAGGGTCGAGGCTGGTGCTTTCCCTTTCGATTCACCTCTAGTGGGTGTAAAGTATAACATTCATAGATTATATTAATGAATGTTTTATCTCATCTCT tttttcaaattattttgttcCAAATGTCTGTAGTTAGTCATCGTTTGGGGTTTCTTCCTTTTATGCTTTTATATCAAGACCAATGTGATTAAAATAGGAA + 45307_PtRNAdb chr-13.trna29-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 29 52479716 52479786 Gly GCC 0 0 37.5 32.20 5.30 Inf His 35.4 IPD:-2.00 Phanerogamae -NA- Dicot GTGGATATAGTCGAATGGTAAAATTTCTCTTTGCCAAGGAGAAGaCGCGAGTTCGATTCCCACTATCCGCC 71 >>>>>>>..>>...........<<.>>>>>.......<<<<<....>.>.>.......<.<.<<<<<<<<. GTTTAGTAGTGGAATTTGATAAAATCGCCCTGAATTGAAGAAAGTATCTGTCCTAGCTCTGACCAAATATTCTTTCGTATCAAGAATCAAGAACGAAAAT CAATGGAATGTATTTAAGATAAGAGGATAAAAGATTCGTTATAGTTTATTGTAAATAGTTTACTAGAATTGGAATATAATAcaccccctaaaagaaaaag + 45308_PtRNAdb chr-13.trna2-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 2 1574866 1574937 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tatatatacgatGGAGATTAGTGTTATAGATTGTGTTATGATCCGTACTCAATTTCTGTAATGTTTTCAATAAGTACTTATTATACCCACCGGACAGCAA agtttttgaattttcttactGGCAAGTGGCACACACCCACAagctttttttcctttccattttataaattggttaattttcaactttaatccttttaata + 45309_PtRNAdb chr-13.trna31-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 31 54376542 54376623 Ser GCT 0 0 78.0 43.20 34.80 Inf Ser 105.6 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTATCCCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. aaatagaaaaaaagggtACCCTAAAGTTTGGATTTATTGATTGATGTTAATGATCAAAGTTATGTGTTATTAATGTCATACAAAAAAGTGGGATATAAGC TCgaactttcttttttctcaggCGACGTCGAACTTTCTTTTTTCCCTGTGTGAATAGGAAACCAGAAAACCCACTGCCCTAGCCTACAGTTTCATCTTCC + 45310_PtRNAdb chr-13.trna32-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 32 55016689 55016760 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CATCAAAATTGAGAGGGACCGGAGATATGTTTTTACCAATCTACATAAAAAGCCCTtcaatatattgaaatttaatttcacttgCAAATTGTGTCATCAG TTTGaaatttttcaccttttttccTTGTTCTCCGATGGAATGAAGGTGGTAACTGGTGAGTTAGTGTTTGGTGGATGAAAACATGAGGGCCATTTGCCTA + 45311_PtRNAdb chr-13.trna33-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 33 55033462 55033533 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aatatcaaaattgagaggGAGTGGAGAGATGTTTTTACCAATCTACATAAAGCCTTTCAGTATAGTGAAATTTATGTTCACTTGTGAGTTTGGTCATCAG TTTGAATTTTTACCTTCTTTCCGTTTCCTCCGATGGAATGAAGGTGGTAACTGATGAGTTTGCTAAAAGAGACATTTGTGATATTCAACAGAGTTTGCTA + 45312_PtRNAdb chr-13.trna34-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 34 55046772 55046843 Gly TCC 0 0 50.0 34.80 15.20 Inf Gly 59.9 Phanerogamae -NA- Dicot GGGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCTGGGTTTGACTCCCGACAAACGCA 72 >.>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>.......<<<<.<<<<<.<. AAACTGAGAGGGGGTGAAGAGATGTTTTTACCAATATATCATGGGGGACATAGAgactattaatatatttaaattttaagtttaacttatgcaGCATCAG GTtggatttttcattttaagcaatttccttttttccttGTTCTCCGATGGAATGAAGGTGGTAACTGGTGAGTGTTCGTTGGATAACAGTCTGATAACTA + 45313_PtRNAdb chr-13.trna35-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 35 55060110 55060181 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gagaggGACTGGAGAAATGTTATTACCAATATAATTGGGGGACATAGAAAGCCTATTAAGAtatttaaaactcaagtttacttGACAGCTGCAGCACCAG ATTggattttttcattttaagcaatttccctttttccttgTTCTCCGATGGAATGAAGGTGGTAACTGGTGAGTGTTCGTTGGATTAAAAGATGAGAGAG + 45314_PtRNAdb chr-13.trna36-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 36 55089525 55089596 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aaaaattttgaaaaggacCAATTTtctcaatatcaaaattgaaagggaGTGGAGAGATGTTTTTACCAATTTATGTTTACTTTGTAAGCTGAAGCACCAG AatgaatttttcatttcaagcaatttccttttttccttGTTCTACGATGGAATGAAGGTGATAACAACATGAGAGCCATTTGCCTACCAAAAAAACCACA + 45315_PtRNAdb chr-13.trna37-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 37 57582782 57582855 Val CAC 0 0 81.4 53.40 28.00 Inf Val 101.0 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCAAACCCGGGCTCAGACA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACAAAATTTGAGCGGTAATTTTGAATGTATTTCgtcaaagaaaagcaaaaaatagAACTATATAAAAGTTATCTTACCGCTTAGAAGCATCTGAATCGGT atttttgttctttatccttattttattgatatgattGGTTTGAACCCCGGGtcatacttttttttacttagattttaggttaaattctgcaAATAGTCCT + 45316_PtRNAdb chr-13.trna38-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 38 57584134 57584207 Val CAC 0 0 33.0 25.30 7.70 Inf Val 46.2 Phanerogamae -NA- Dicot GTTTGGGTGGTGTAATTGGTtATCATGCTAGTCTCACACACCAAAGGtCCCCAGTTAGAACTTGAGTTTAAACA 74 >>>>>>>..>>>...........<<<..>.>>.......<<.<......>.>>>.......<<<.<<<<<<<<. atctaATATCACAAATtggaaaatagcaaaaaaaaattatttatattattcatcaaagaaaataaaaataattttaacagccACAAGTATCTCGATTGGT cttcatttttttcttataatatgACCGGTTCGAAGTCGGTTAAGATTTTTTTCGATGGTCTTTTCATCTTGGTCTTTGAACATTTTCATTGTCGacatta + 45317_PtRNAdb chr-13.trna39-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 39 58199231 58199301 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GAACCGTCACAGAGCAACTTCATCTTCTCCACTCGGTCGAAAGCCCTCAAGGGCCGTATGGTTGTACGAAAGAAGACTATTTATATCTAATGAACAACTA aatatttttatatatggaTATCTGAGTTACAAAAGGTACGAGCACGAAGAAGTTCCACAGCAAGCGAACACGGTATCATCAACGACAGCTTGCTAAAGAG + 45318_PtRNAdb chr-13.trna3-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 3 1580265 1580336 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tcaaatcaAGTTAGATGATATTTTAAGAGCATGACCTTCCATACTCGATTTCTGTGGattgtaaaatacaataaaatttattataccCAGTAGACAGCAA tcttttaaattttttattgctGTCCTTACACGTAGCAACACCACCGGTTCATTTTCaactttagtccttttaataTGCTTGAGatttaattcttatactt + 45319_PtRNAdb chr-13.trna40-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 40 57781265 57781192 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAATCCTATATATTTACACAATTTCTCTATTTGGttttattctaataaaaataattgtacaAAAGCTATCAAAGAATATATTTACGCTTGAAATCAATGT AGCTTTTGGgcccatttttttcttttgtaattttccaCTTTTTTAAATTCTGATAATATAAATATCGACTCAAGTCcaattagattttatattttcctCC - 45320_PtRNAdb chr-13.trna41-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 41 57397713 57397633 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. ACGGGTTAATTTTTGTTCTGTTGATTTTTGTGGTATTGATAGCGACAATGTGAATATCatgtacattattatttttaattttgaacaaTTGATCACCAAA TTGTTGtgtctttttttgttttctgtgtAGTCTTTGAATCTTTTATTCTTAGAATTTGgtacttcttttttatttggtccaaaaacttggaaatttttta - 45321_PtRNAdb chr-13.trna42-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 42 56890658 56890577 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. TAAAGCATTGAGTAACTGGACACCTCACATGGAGTCCTTTATTTAGAGGAAAgcttaaaagaaattaaatataaacaaaatatactAGAAAACAAGATGT CttactttttgtattttttggcACTTTCttcaaattccaaaaatatCCTTCCGTGGGAAATGAGATTGTtgcttttataaatttctttttcaaaaatatt - 45322_PtRNAdb chr-13.trna43-Arg-TCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 43 55427673 55427600 Arg TCG 0 0 82.3 61.00 21.30 Inf Arg 91.9 Phanerogamae -NA- Dicot GACCGCATAGCGCAGTGGAttAGCGCGTTTGACTTCGGATCAAAAGGtCGTGGGTTCGACTCCCACTGTGGTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tataacttttcataccACTCGTATAATTTATCAGCTTTATTATCATGGAATACAAGCTTTAAATACAAgtctttaaaatattgataagcAAATATCAAAA ATCTTTTTAattagtcaaaaaaaaaaaaataccgaTAATTTGTAGGCTATTAGACCGTAATTGTGGACCGTATTTAGAATGATTAATTTGTAGGCTATTA - 45323_PtRNAdb chr-13.trna44-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 44 52706781 52706708 Met CAT 0 0 42.3 23.40 18.90 Inf Arg 42.1 IPD:-31.20 Phanerogamae -NA- Dicot GGGCTTATAGTTGAATTGGTtGAAACGTACCACTCATAACGGTTATAtTGTAGGTTCGAGCCCTACTAAGCCTA 74 >>>>>>>..>>>...........<<<..>>>.........<<<......>>>>>.......<<<<<<<<<<<<. taattgttCATTCCTGGGAAGAGGAAGAAGCAGATAGAGCAAAGGCCCCCTTTCCGTCTGCTCTTCCCGAAGTGAGCAAATTGCATGTAGAGATCCGTAG CCACCCCTTCTCTTCACCCGATATAAGGCAGGCGAAGTCCCCGCCACCCTGCAGATCTCAATCTAGCGACGGCACCTGGAACCACACTGCTGCCACTGCC - 45324_PtRNAdb chr-13.trna46-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 46 52480024 52479951 Met CAT 0 0 63.8 37.70 26.10 Inf Met 75.0 Phanerogamae -NA- Dicot CGTGGGATAGAGCAGTTtGGTAGCTCGCAAGGCTCATAACCTTGAGGtCATGGGTTCAAATCCCATTCCCGCAA 74 .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.. CCCTTTACTATTCTATATAAATAGGCAATtctatttatacatatatggaAGAGGGGCGCATTCAATCTTTGTTTGTTCATTAGTTTGGTTTCTTTTCAAT cattacatttttttgacaaaaagaagaagaaaaagaagaagacttGACCCTATTAATTagtcatctttttcttttagggggtgTATTATATTCCAATTCT - 45325_PtRNAdb chr-13.trna47-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 47 52079182 52079109 Ile TAT 0 0 72.6 62.10 10.50 Inf Ile 88.9 Phanerogamae -NA- Dicot GGTCCCCTAGCTCAGTTGGTtAGAGCGTTGGTCTTATGAGCCGAAGGtCGCGAGTTCGAGCCTCGCCGGGACCA 74 >>>>>>...>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<<<. aatattttcatttatgtttttattatttttggtaataaatcattatgcaagagggaaagaaaattaatcattaaactaaaaatacaaAGCATTATTAATT TCGGCATATTTACTTCGTATATGTTTTGGATTTTCCTGAGTCTTTAAGTCAAAGTTATAGCCAGCATGGCCCAACATCCCTTCTCATGGGGGGTTTTTAG - 45326_PtRNAdb chr-13.trna48-Arg-CCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 48 48767255 48767183 Arg CCG 0 0 69.2 51.20 18.00 Inf Arg 93.1 Phanerogamae -NA- Dicot GTTCGCGTGGCCTAATGGAtAAGGCGCTCGCCTCCGGAGCGGGAGAtTGTGGGTTCGAGTCCCACCGTGAACG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGGAGCTTAAATATTAGCTTGTACCCTACACTTTAATTTACTCGGCATAGGTTAtacaaaataaagataaatattatttgtgagCAACTGCAAACAACCA ACTTTTTTAAATCTTTCCATTTTTTGTCTCCTTTTTcgcttgtttttttttctctattttaagTGAACAAATAAGACAATTTTAGAAAATAGCCTTTTTA - 45327_PtRNAdb chr-13.trna49-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 49 47608423 47608350 Thr AGT 0 0 76.0 48.40 27.60 Inf Thr 90.6 Phanerogamae -NA- Dicot GCTCTCGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACGAGAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TACAAATGTACAACAACACACGATTAACATGCTGTAATTTTGAACGTTAGAAAGTTTTCTAACTAagtttacataataatataattaccGCTGTCAAGAA AATTGTTGCCTTTcgataattttaagtttttaggaTTGGAATCGATTTTCCAggaaaagttttctttttctttggtaACAACCGTTTTTGCCTAGTCCAA - 45328_PtRNAdb chr-13.trna4-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 4 1665572 1665643 Cys GCA 0 0 79.7 60.70 19.00 Inf Cys 107.9 Phanerogamae -NA- Dicot GGGTCTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACTGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCATCATCTTTTGTGTGTCAAGTGTCAACCATACAAAAAACATATGATAACCGTGAccttttacaaaaagaaaaatttattttttattaaaaattcaacg ttgtttatatatttttgccGAGTCCGTCCATCCTTAGTTTATACATCTAGCGGTCAAAGTAACATTGCATCTCAATGGGGTCCATAGCTCAGTGGTAGAG + 45329_PtRNAdb chr-13.trna50-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 50 37077041 37076968 Ile TAT 0 0 85.9 70.60 15.30 Inf Ile 103.9 Phanerogamae -NA- Dicot GGTCCCGTAGCTCAGTTGGTtAGAGCGTTGGTCTTATGAGCCGAAGGtCGCGGGTTCGAGCCCCGCCGGGACCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGccgcttttaaaatttaaaattaaaaagattattataattcaaaattttgcatcatctagaaaaagaataaataaaataacacgACAATATTCATCGTT AGCTGTTTTTATAATTCTCGGGCTTTTTTTATCAGCCCATAAATCAGGCTAGCGGATCAGCTATTGTAAACTATGTTTAGAagttaaaaatacattttca - 45330_PtRNAdb chr-13.trna51-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 51 36753933 36753860 Trp CCA 0 0 72.0 42.50 29.50 Inf Thr 75.4 IPD:-18.90 Phanerogamae -NA- Dicot GCGCTCTTAGTTCAGTTcGGTAGAACGCGGGTCTCCAAAACCCGATGtCGTAGGTTCAAATCCTACAGAGCGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGCCAAGGGCttctttattatataattatcttaTGCATGCAAGATGTATTGGGgtcacataaaatttattattattatgtttttattatgaaaataaaaa ATTCCATTCTTGTTAGATCGAGAATGACAATGAAATAATTGAACAGCAGTCTAAAGTCTGAATTTGACCTCTAGTTTGTTTTTAgggttaatacaaagaa - 45331_PtRNAdb chr-13.trna53-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 53 35300866 35300792 Glu CTC 0 0 46.1 30.20 15.90 Inf Glu 53.2 trunc_end:3 Phanerogamae -NA- Dicot AATctATTGTAGTCTAGTTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGAGTTCAAGTTTCGGCAATGTTT 75 >>>..>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CAATTTTAAAGCATAATGCTATATTTTGCAAACCTTGCTTACCACCCTctaaaaatgacaaataattaataaatagataaaaaaatagtcTTACATTATC tgcttattttgttctttttccccatttttcttgcttttttttctcattttgattgCTTACTTTGTTACTGGTATGGGTTTTTGTTACTGCTtgcttactt - 45332_PtRNAdb chr-13.trna54-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 54 32546190 32546120 Gly CCC 0 0 58.3 29.10 29.20 Inf Gly 82.6 Phanerogamae -NA- Dicot GCGGATCTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGaCCGGGGTTCGATTCCCCGGATGCGCA 71 >>>.>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<.<<<. TACATATCAATCTATCAAAGGCTTACTCGTCATTGGAAATTGAGAgatttcttaattattaatgATCAAGAAATAAAGCGATAACCAGCTCCAACAAAGG TTTATcattttgtttacatttttcTACCATTTTTATGACGGCATCGTGAGGTTATGTTTGCTTTGGAGTTCTATTTTGTTCGaagtatttttgataaatt - 45333_PtRNAdb chr-13.trna56-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 56 23796979 23796907 Phe GAA 0 0 58.0 42.60 15.40 Inf Thr 62.2 IPD:-3.50 Phanerogamae -NA- Dicot GTTGGGGTAGCTCAATTGGTAGAGCAGAGGACTGAAAATCCTCGTGtCACCAGTTCAAATCTGGTTCCTGGCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTCACCCAATCATCAGCTAAtcattacatttaaaaaaaaaatttgtgacgTCACTATGTCAGGCAACACCTAGTATTATGAGGATAATGCGTCGGTAATG TATGATTAATTTGTATGAGTATTTACtctacaaattaatttatatggATCGACATAATACATACTTATCTAGCTAGGTATCTGAGATTAAACcctctctt - 45334_PtRNAdb chr-13.trna58-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 58 23482484 23482401 Tyr GTA 0 0 35.8 19.20 16.60 Inf Tyr 51.6 Phanerogamae -NA- Dicot AGGTCGATGCCCGAGCGATtaATAGGGACGGACTGTAAATTCGTTGGCAATATGtCTaCGCTGGTTCAAATCCAGCTCGGCCCA 84 .>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<..>>>...<<.<...>>>>>.......<<<<<<<<<<<.. CTTTCAAGGAGGCAGCGGGGATTTGACTTCCCCTGGGGGTAGGGTACTACGAAAGGAAGTTGATCATGGATTATCAATAAACCTAGAATTGATTCTTCCT ATAATTCGCTGATCCGCCATAACCTAAAATGCccatttttttgtattttgttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN - 45335_PtRNAdb chr-13.trna59-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 59 15781926 15781855 Asp GTC 0 0 60.8 47.10 13.70 Inf Asp 82.0 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCTCGCCTGTCACGCGGATGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<. TAAATGCCATTTGAATTTTCCTTttctgataaaaaaaaaaacacgcgTCATATTTAcgttttattatatatagtctaatattgataatttaaaacttaag tttataatattttcagtaattttattCCAAAATGAGTGGAAAGAAACAAGCAACCCATTTGGAGATTTCAATTCCCgccataataatataaaacataatt - 45336_PtRNAdb chr-13.trna5-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 5 1665721 1665792 Cys GCA 0 0 76.6 54.40 22.20 Inf Cys 99.0 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTTGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGGTTCGAACCCGGTTGGGCcctttgtttatatatttttgccGAGTCCGTCCATCCTTAGTTTATACATCTAGCGGTCAAAGTAACATTGCATCTCAATG aattttacctatttttgcCAAGTCCGTCCAAAACTTCCATAGTTTATACATGTACTAACCAAAGTAGAATTGCTTCTGAATGGGGTCCATAGCTCAGTGG + 45337_PtRNAdb chr-13.trna61-Thr-CGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 61 15590119 15590048 Thr CGT 0 0 75.5 57.80 17.70 Inf Thr 84.3 Phanerogamae -NA- Dicot GCCTGCGTAGCATAGTGGTAGTGCGTTCGCTTCGTAAGCGAAAGGtCGCGAGTTCGATCCTCGCCGGGGGCT 72 >>>>.>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. ttaaacatattttgtaACTTGAATAGAATCTTGGAATTTTCTGACACCTTGGAATATTGACcagttaaattatttaatatcaaaaccatGAATAACAGCT gttttttaaatgttttaccattacttaaaataaaattgaataggtTTAATTATGATATTGGTCCCCATATCGTTGATTTAATTTAGACAAATTTTGGTTC - 45338_PtRNAdb chr-13.trna62-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 62 15053921 15053849 Ala TGC 0 0 70.0 44.20 25.80 Inf Ala 100.4 Phanerogamae -NA- Dicot GGGGTTGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGtACAGGGTTCGATCCCCTGCAACTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tCCCTCTCTTTCTTTCCAATCCACCCAATTGACGTCCCTGCCTAAAATGTAATccaagtatttaaaatattataggGAAACTAAAATTATGAAAGCAAAT ATGAGTTGAAAACCATTTTATATCGACACTGAAAATTCGAAGTGTTTTCCTTCCCCAACcatgttttagatttttttttttatgggtaAAACACCCCAGT - 45339_PtRNAdb chr-13.trna63-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 63 12670913 12670821 Ser TGA 0 0 35.2 23.70 11.50 Inf Thr 35.4 IPD:-4.10 Phanerogamae -NA- Dicot GGAGAGATGACTAAGTGGTtgATAGCTCCGGCCTTGAAAATCGGTATagttcgaaacaaATTACTAtTGAGGGTTCAAATCCCTCTCTCTCCT 93 >>>>>>>...>>>.........<<<..>>>>.........<<<<........................>>>>>.......<<<<<<<<<<<<. tagataaatagaTTGATCTATAGGTTCACACACGATATCTTTCTAACTCTATGGCCATGTTCGGTTCggtgaaataaaaataggatTGAAATTAGCTTTT TTTGCTTGATGAatatattccttttttttattactttttcttGACTTCTTAATTAAGaatcttaatattaataaaaggtAATGGCTCGACTGGGTGGAAT - 45340_PtRNAdb chr-13.trna64-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 64 12088722 12088650 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tcacctctaatcaCATCTAATGATATATATTGGCGTGGCAACAATATTCAACAAAAGCTGCATGAActaaaaacaaataagaaagCCACATGACGTGCAA ttttattaaaatttattaatttcgtTACATTTTTCACATTAGGACTTGGGTATTATTACTTTGGGCAAATTTTCTCAGTTCCTTGCCCAGTTAAACTGAC - 45341_PtRNAdb chr-13.trna65-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 65 8495872 8495800 Ala AGC 0 0 54.3 33.90 20.40 Inf Ala 82.7 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGAATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. aaagacagATGTGGGATCCACAAAACTCGAAACAGTTCATCAATACAACTTTAAAGTCGGATACGCCATTCCCAGATTCCTTTGCCCAGGTATCATCGGT TTTCCTTCTATGACtccatttttgacattttatggttttgtattttaattttgaagttaaaaCATGTCAGGTCTTTGTATTCTTTACAgagttataattt - 45342_PtRNAdb chr-13.trna66-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 66 7922807 7922736 Thr TGT 0 0 76.2 49.20 27.00 Inf Thr 89.8 Phanerogamae -NA- Dicot GCCCTTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGtCTGTAGTTCGATCCTGCATGGGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGGGTAAAATTTAAGTCTGCAAAAGCGACAGATTGGTCAAAACCATCGTATGGTTGAGTTCTTTGTCAAATAAATGTTTACGGTGGAAATTACAGCAAA GTTCCATTCTGCAAAATCCAGCCGGATTTGATATCAGAATAGCCATCGTATTGTTGAGTTCTTTGTCAGATATGTTCTTAGAGTTAGATGAAATTTACGA - 45343_PtRNAdb chr-13.trna67-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 67 7922621 7922550 Thr TGT 0 0 79.4 48.40 31.00 Inf Thr 92.4 Phanerogamae -NA- Dicot GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGtCTGCAGTTCGATCCTGCATGGGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AATCCAGCCGGATTTGATATCAGAATAGCCATCGTATTGTTGAGTTCTTTGTCAGATATGTTCTTAGAGTTAGATGAAATTTACGAATGCATACAGCAAA tttctattttattttttttcaattttttggtttAGTAATATTGCTAATTTATTATCCAATCCAGCCCTCTAAGCGCTTAGAGCAAGAAAACCCACAGAGA - 45344_PtRNAdb chr-13.trna68-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 68 4672553 4672482 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aagagagaaaaaaaattaaatacagagctaatttttattttttggggtgAGGTTggaagagaaaatgaaattgaaaactgGAACTGATACAGAGCGACAT AATCACACTGTTTCCTTTTTTTATCTTACCATAGAACCAGCTTCTAAAACTAGAATAAAATAGAAGCTTATCTGAGAAGATGAGGACTTTTCCAGTGAAT - 45345_PtRNAdb chr-13.trna69-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 69 4671668 4671597 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTCGGAAGCACTTCACCCTAATTCCACTAGCAGAAAAGCCCACAAACAATCCAGTTCTTACTTTGGCTATATAAAAGCCAACATCACATAGAACAAGATT AAAAATGCCTTATCTGCTTTTTGATCTGCCATAACTCACACATGGAATGGAAACATATTTGGGTAGAAGGTTAAAACACAAGTCTTTATTGCTTAAGAGG - 45346_PtRNAdb chr-13.trna6-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 6 1665875 1665946 Cys GCA 0 0 82.1 59.90 22.20 Inf Cys 106.6 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGAACCCGGTTGGGCCctaattttacctatttttgcCAAGTCCGTCCAAAACTTCCATAGTTTATACATGTACTAACCAAAGTAGAATTGCTTCTGAATG GCTTACTTAATTTTGCCAAGTCCGTCCTAAACTTCCATAGTTTATACATGTAGTAACCAAAGCAAAATTGCTTCTCAACGGGGTCCATAGCTCAGTGGTA + 45347_PtRNAdb chr-13.trna70-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 70 4670075 4670004 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAACAATTTGCTCAGAAGTCAGCAGATAAACATCAAAACTTGGcacaatttgaaaaaaagagcTAATAGCTAAACCAAATTCAGTTAAACATTCAAGATT AATTCCTAGTTTCTTTTTATCTGGACTTCATCTTGAACTTTCTGCTAACATCAGTCGGTAATGAGGGGGCCATGAATACAAGGAACAGCCACACTATTCG - 45348_PtRNAdb chr-13.trna71-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 71 4669327 4669256 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gaaaagaaacaaggGGCAGCTCATATGGGATTACCCATTTAGAGTTAATAGGACCCCAGAAACTGAAAAAAATACACTTGACATTGCAAGTATCAGAGTT ACCCTAGTTTATCCTTTTCCcccttaatttcaaatatatgatcATTTAGAATGAAGTCTAAAAGTCAAATATCAGATCTCTCTTTTTCCTGACAAGATTC - 45349_PtRNAdb chr-13.trna72-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 72 4668381 4668309 Pro AGG 0 0 59.9 32.30 27.60 Inf Pro 105.1 Phanerogamae -NA- Dicot GAGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCccCA 73 >.>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<..<. aaattttagtacTCCAAGAATGAGCCCATTGAAAGTTAATAGGAGTTCTAGGAGAAAAGATCTAGTAGCTACAAATCACACGTGaagtatattaaaaatt gccatttttccattttttccctaatttcaaatatatgatcAGAGGACCAACGGGAAGGTCAACTCTTTAAGTCACATCAGATCTATTTGTATCCTGAAAA - 45350_PtRNAdb chr-13.trna73-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 73 4667429 4667358 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aattttggtattcCAAGAATGAGCCCATTGAGAGTTAATAGGAGTTCTACGAGAAAACAATCTAATAGCTACAAACTAGACGTGAAGAATATCAGACATT AGcacttttttccttttggttaTCTATATTAtgtactaaaatattttattagaggAATCTGTACCAAAGTCAACTTTTAAGAACAAATATAGAACTTTAT - 45351_PtRNAdb chr-13.trna74-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 74 4666292 4666221 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AACAATTTGCTAACAAGTCAGCAGACAAACATCAAAACTTAGCACAACCTTGAAGAAAAGAGCTGCTAACTAAAACAAATCTAGTAATACATCCAAGATA AACTCcttatttgattttagttttatctTACAACTTGAAATATTGATCAAAAGAATCTAACCAGAAATCAAATTCGAAagcacaataaaaaaatttatca - 45352_PtRNAdb chr-13.trna75-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 75 4665490 4665419 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGCAAGAGAAGAAACAAGGACTGCTCATATCATGTTAACCAATGTGAATTAATAGGATCctagaaagtaaaaaaaatatttgagtacaaacatcaaaatt AgccatttttccattttttccctaatttcaaatatatgatcAGAGGACCAACGGGAAGGTCAACTCTTTAAGTCACATCAGATCTATTTGTATCCTTATG - 45353_PtRNAdb chr-13.trna76-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 76 4664605 4664534 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aattttggtattcCAAGAATGAGCCCATTGAGAGTTAATAGGAGTTCTACGAGAAAACAATCTAATAGCTACAAACTAGACGTGAAGAATATCAGACATT AGcacttttttccttttggttaTCTATATTAtgtactaaaatattttattagaggAATCTGTACCAAAGTCAACTTTTAAGAACAAATATAGAACTTTAT - 45354_PtRNAdb chr-13.trna77-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 77 4663298 4663227 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAACAATTTGCTAACAAGTCAGCAGACAAACATCAAAACTTAGCCCAATTTGAAGAAAAGAGCCAATAACTAAAACAGATTCAGTTAAACATCCAAGATA AACTCcttatttgattttagttttatctTACAACTTGAAATATTGATCAAAAGAATCTAACCAGAAATCAAATTTGAAagcacaataaaaaaatttatca - 45355_PtRNAdb chr-13.trna78-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 78 4661714 4661643 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAATTATGGTATTCCAAGAATGAGCCCATTGAGAGTTAATAGGAGTTCTAGGAGAAAAAATCTAATAGCTACAAGCTAGACGTGAAGAATATCAGACATT AGcacttttttccttttggttatctatattatatactaaaatattttattagaggAATCTGTACCAAGGTCAACTTTAAGAACAAATATAGAACTTTACA - 45356_PtRNAdb chr-13.trna7-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 7 1666027 1666098 Cys GCA 0 0 78.0 55.90 22.10 Inf Cys 101.2 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGATGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTCGAACCCGGTTGGGCCCTGCTTACTTAATTTTGCCAAGTCCGTCCTAAACTTCCATAGTTTATACATGTAGTAACCAAAGCAAAATTGCTTCTCAACG GCTTTCACTTGCTTTTGCCAAGTCCGTCCAAAACTTccataatttatacatgtagTAACCAAAGGAAAATTGCTTCTCAATGCGGTCCATAGCTCAGTGG + 45357_PtRNAdb chr-13.trna80-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 80 4659636 4659565 Pro TGG 0 0 68.9 36.50 32.40 Inf Pro 109.4 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTTGCTTTGGGTGCAAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAACTTTGGTCTTCCTAGAATGAGTCCATTGTAAAGTAATAGAATTTCTACGAGAAAAGATCTACTAACTATATACCAGACATGATGGATATCCAAAATT AATTTCttgccttttttcttttcagttcCCTCTTTTATatcctaaaatattttattagaggAATCTTTAGTAAAGTCAACTTCCAGAGCATAATACTGAA - 45358_PtRNAdb chr-13.trna81-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 81 4639417 4639346 Pro TGG 0 0 61.8 31.00 30.80 Inf Pro 103.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCTCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGCTCAAAAACAGTCCTGTTGTGATCAGAGACCTCATCAACAAATAAAGGTatgtttcttgaaaatttaCTATCGTAGATGTTATAACAATAAAACATT AACTGTTATTTTCCTGCATTGGGAGTTAATAGGACTTTAAAGACTGATCAAATATACTAAACATCATAAATATTAGAACTGAGCATTTGGTCTAGTTGTA - 45359_PtRNAdb chr-13.trna82-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 82 4639265 4639191 Pro AGG 0 0 49.5 23.20 26.30 Inf Pro 96.4 Phanerogamae -NA- Dicot GAGCATTTGGTCTAGTTGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCcccTCT 75 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<...<<. TTCGATTCTCGGAATGCCCCAACTGTTATTTTCCTGCATTGGGAGTTAATAGGACTTTAAAGACTGATCAAATATACTAAACATCATAAATATTAGAACT GTCTGAATTAATTTCTATCATATCTCTGCTTAAGACATCTTTTTATTCCCTGTTTTTTTTTCCAGATCCAACTAGCAGCCTGGCTAGCTGTCCCCTTCCC - 45360_PtRNAdb chr-13.trna83-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 83 4638495 4638424 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAACTTAGGTCTTCCAAGAGTGAGTCCATTGAAAATTAATAGGACTTCTAGGAGAAAAGGTCTGATAACTAAAAACCAGACATGATGGATACCAAAAGTT AAATAccttattttttcccttttggttCCCTATATcttatcttaaaatattttattatagctCTGCACAGAAGTCAACTTTTAAGAACAAATAAAGAACT - 45361_PtRNAdb chr-13.trna84-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 84 4636703 4636632 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GATTTTGGTCTTCCAAGAATGACCCCGTCGAAGATTCATAGGAGTCCTATGAGAAAAAGATCTGATAAGTAAAAACCAGACACGATAGATACCAAAAATT AATAACCCTGCTTTTTTCTCCTTTTGGTTCCCATatcctaaaatattttattagaagAATCTGTACTGAAGTCAACTTTAAGAGCATAATACAGAACTTT - 45362_PtRNAdb chr-13.trna85-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 85 4358071 4358000 Asn GTT 0 0 66.9 51.40 15.50 Inf Asn 66.4 Phanerogamae -NA- Dicot TCCTCAGTAGCTTAGTGGTAGAGCGGTCGACTGTTAACTGACTGGtCGTAGGTTCGAATCCTACTTGAGGAG 72 >>>>>>>..>>>>.......<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. CTACAAAGAAGTTCCGGGGGTTACAAAGGAAACTTCGAGTTCATACTGGTCATGGGTTGAGAACGGGAATTGAACTCTATGAGATCTAATCTCCCGTTGT ATTTGATTCATTCCGAATTAAAGAATTCAGAATGTCAGAATGAAAGGGTTTGTTTTGACTGTTAAGAGCAGGTACCCGTTCCCTATGTCTTTGTTTCTAT - 45363_PtRNAdb chr-13.trna86-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 86 3007280 3007196 Met CAT 3007242 3007232 64.2 40.80 23.40 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>....................<<<<.....>>>>>.......<<<<<<<<<<<<. AGCTTTCTTGTACCTGTAGCGTATTTTCAGGCAGTGTCCGATGGTAACAAATTTCAgttcatatattatatttttaagagagCACGGTAGAATCAAAGAA aatttcctttttctgttttactttCGTTCTTTCAATAACAGTATTCGGAGACACATCAACTAGCTTACATTGTAGGGgaagaacatatttaatttaagaG - 45364_PtRNAdb chr-13.trna87-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 87 2931901 2931830 Gln CTG 0 0 74.3 49.60 24.70 Inf Gln 103.3 Phanerogamae -NA- Dicot GGTTCCATGGTCTAGTGGTcAGGACATTGGACTCTGAATCCAGTAaCCCGAGTTCAAATCTCGGTGGAACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TAATGGTGGGAAATGCACATGGATAAACTAGGGAGGGGTTTCATAGCTTCGTTGcattaaaatagtattaaaaataaaggtttGAGAAGTTAGCCAACAT ttcttatgtttttttcctttacttttccgTTGTCTATTCGCAATGTCTATTACTAATGGTGTTCAAATGATTTAGTTATTAactgtaaaaatatattata - 45365_PtRNAdb chr-13.trna88-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 88 2924036 2923964 Met CAT 0 0 45.2 23.40 21.80 Inf Thr 47.8 IPD:-21.80 Phanerogamae -NA- Dicot ACCTACTTAACTCAGCGGTtAGAGTATTGCTTTCATACGACGAGAGtCATTGGTTCAAATCCGATAGTAGGTA 73 >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<. GTCGGTTTGATTGGTATTGCTTAGAAGTAACATTAGATTTATAATCCATCGATGTAATAAGTCCCTTTTCTCTCTTTATGATTCCTTATGATAATAAATG GCACTTATTAAATACCATCGATCCCAGTGTCTAATAAGTTTTTCTACCCAccttcttttagttttttttttttacaatgcctagaattacatataaataa - 45366_PtRNAdb chr-13.trna89-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 89 2769898 2769804 Tyr GTA 2769861 2769840 74.1 42.60 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>.............................<<<<<.....>>>>>.......<<<<<<<<<<<<. TGTtatctatataaataaaaatctgtTATCACTAATGGTATAAAGTCAAGAAAAccaaaacttaatatttttaaattgtttgctAGCAGCTAGCACAAGA tgttttctaaatttttgccTTTTCGGTTAAATTATGCTCGAAGTCCCTGtaataatcataaatttagaatttagtctttctaagtttatttcaataaatt - 45367_PtRNAdb chr-13.trna8-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 8 1666181 1666252 Cys GCA 0 0 72.0 56.00 16.00 Inf Cys 98.1 Phanerogamae -NA- Dicot CGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 .>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.. CGAACCCGGTTGGGCCCTGCTTTCACTTGCTTTTGCCAAGTCCGTCCAAAACTTccataatttatacatgtagTAACCAAAGGAAAATTGCTTCTCAATG GCTTTTACTTGCTTTTGCCAAGTCCGTCCAAAACTTCCATAGTTTATACATGTAGTAACCAAAGTGAAAATGCTTCACAATGGGGTCCATAGCTCAGTGG + 45368_PtRNAdb chr-13.trna90-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 90 2459308 2459236 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tgagaaaaaaatactaaaaatccGGAATACTGTAGGAAGTTCAATAGCAACTTAATCAATAAAtgacttaaattattttattcaaattaacaaACAAGAT atttttcattttttccgatcgttttttgtttgaaaaatttcGGCAGTCATTATCATGAATCAGGGGTTTTTGGTTAATTCTTATAGGCGTTGCAGTTGGC - 45369_PtRNAdb chr-13.trna91-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 91 1804123 1804052 His GTG 0 0 49.5 34.10 15.40 Inf His 73.7 Phanerogamae -NA- Dicot GTGGCTATAGTTTAGTGGTtAGAATTCTACGTTGTGGCCGTAGAGaCCCGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>...>>>>........<<<<.>>>>>.......<<<<<....>.>>>.......<<<.<.<<<<<<. AGAGTACAAAGACCTAATGGTATATTTTATACCTATAAGTTATTAcccataattatattttatgatttctagTAAAATGAACAGTTTACCAACCAAAAAT AATAGCTATTATCTTTTGTTCATTTTGGTTCTAGTGTGCAACgattagatttaattaattaaactcaattatataaaattagggataataatttatttaa - 45370_PtRNAdb chr-13.trna92-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 92 1801677 1801606 His GTG 0 0 63.3 34.30 29.00 Inf His 91.7 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTtAGAATTCTACGTTGTGGCCGTAGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AAACCATTATATACAAACGTCTCTTTTATCGGACAGCGAAGAGATGAGTTACGGTATTTCATAGTTTAGTAATAGAATGAACAGATCCTCGACGGATGAG TGTTATGcctgttttagttcatttttgacacatatatatttatatgaatatatattattttatatgtttataatttatatgaattttattatatgtttgt - 45371_PtRNAdb chr-13.trna93-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 93 1476251 1476180 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TATATATACGATGGAGATTAGTGTTATAGATTGTGTCATGATGCATACTCAATTTCtgtaatgttttaaatataaaattattataccgATTGAACATCAA aattttcaaatttttttgttgtccTTTCGTCTTGCTGGCACGTGGCACACACCcacaagctttttttttcttttccattttataaattggttaaatttca - 45372_PtRNAdb chr-13.trna94-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 94 1309474 1309402 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tgataTTTGGGTGCAACTTTGGGGGCCAAATAGTGCATTAACCCAATGAATTACGTTGATTTATAAACCATAATGATTAACGTGTCTAGAGCACTCAAAA gtaatttttgaaattttattttgggcttCTGTGTTTTTTTGTATACAATGCCATTTCAAATAGAATTCGTTTGATGCATCCATTTACATGGTTTCCTTTT - 45373_PtRNAdb chr-13.trna95-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 95 1200104 1200032 Ala AGC 0 0 58.7 38.60 20.10 Inf Ala 93.1 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTTGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATTTGGCATTGAACTTCTTTCTTGTGGAATCTGATGTCAAGGAAAAGAATTGTTAATCgtaaaatacaatttcaagATTAAcctttagaaaaaaatgaaa CTTTTTCTGCTTTTTCCCTTCTCAAAATCAAAGCTGCTCGTTGGTTGGGCAATTACGGTAATGCGACGTGTTgatggttttaatttttacggTCTTTGTA - 45374_PtRNAdb chr-13.trna96-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 96 389368 389296 Arg ACG 0 0 71.7 49.10 22.60 Inf Arg 91.4 Phanerogamae -NA- Dicot GACTCCATGGCCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGTGGAGTCG 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. attttacttgatttAGCAAAATATTTCTCTTctagtataatgactaaatttctacgtaaattataatataaaaaaattcacttcaCTAATCCGACAACAG ctcTTTTTACTTGTTTAACGTTTGACATGTGTCCCCGTCCCAGGCGAAAACgattttctatatttatattatattttcttttcgcaaagagaaaagaaat - 45375_PtRNAdb chr-13.trna9-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-13 9 1666335 1666406 Cys GCA 0 0 82.1 59.90 22.20 Inf Cys 106.6 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CGAACCCGGTTGGGCCCTGCTTTTACTTGCTTTTGCCAAGTCCGTCCAAAACTTCCATAGTTTATACATGTAGTAACCAAAGTGAAAATGCTTCACAATG gcttttacttaattttgcCAAGTCCGTCCTAAACTTCCATAGTTTATACATGTAGTAACCAAAGTAAAACTGCTTCTCAATGGGGTCCATAGCTCAGTGG + 45376_PtRNAdb chr-1.trna10-Arg-TCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 10 12266513 12266586 Arg TCG 0 0 82.3 61.00 21.30 Inf Arg 91.9 Phanerogamae -NA- Dicot GACCGCATAGCGCAGTGGAttAGCGCGTTTGACTTCGGATCAAAAGGtCGTGGGTTCGACTCCCACTGTGGTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGTCAAATTGCCTTAAATATTCTCATGGGGTTTGACAGCTTTCAAAAcgttctttattgtattattaaaataattttatctaattgaatGAACAAAAAA gtttgattttattttatttttaattgggtTCTATTTTGGGTTGAATTGGACTGACCCAATCCagcaaaataaaacacaacatctTACTCCACACgtgtga + 45377_PtRNAdb chr-1.trna11-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 11 13033753 13033832 Leu TAG 0 0 69.5 48.50 21.00 Inf Leu 111.5 Phanerogamae -NA- Dicot GACAGTTTGGCCGAGTGGTctAAGGCGCCAGATTTAGGCTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACAGCTGTCA 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. aagtattattaagtttattataAATCGGGCCATTAGTGGGCTTGCAGAAATTCAAATTTCTCCATAAAAAATTGATTGCTCACCTTAATTTTCAGTAACG aagattttttattttatttgcttttaatttcaatatttgaaataaaaaattcaaggcATATAAACTGAAAGGAAAAAGAGAGTATCGACTTTTAATCAAT + 45378_PtRNAdb chr-1.trna12-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 12 14022962 14023034 Val TAC 0 0 72.7 40.30 32.40 Inf Val 100.4 Phanerogamae -NA- Dicot GTTGCTGTGGTATAGTGGTtATCACGTCAGTCTTACACACTGAAGGtCCCCAGTTCGATCCTGGGCAGCAACA 73 >>>>>>>..>>............<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGAAATATAAAGTAAAACTGCGGTTCATCCCATCACCGGATGGCCATTTTGGCGatgtgataatttattcataaaaaagaCACGGACATTGGCGTCGAAT taagtttaattttaaagaacACAGTGAAACCTAGGATCACTACCTGAGAACAAAAGCAGCATCACAAGTAGTTACCGTGATGAAACTAAAAGAGGGATTG + 45379_PtRNAdb chr-1.trna13-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 13 14055086 14055158 Val TAC 0 0 75.3 42.20 33.10 Inf Val 99.8 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTCAGTCTTACACACTGAAGGtCCCCAGTTCGATCCTGGGCAGTAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aaatgaagAAAAGATAACTAACGAAATATATGACATTGAAAGTAAAAGTGtggtttgtattttatttgtattacaGGAACATGTGTGTCAGACATCGAAT TCTGTATTCaaatacatgcatttttttaaagaagacaTGGTGAAGCCACGGATCACTACCTGAATGTCAGCTTCACCCTTTACACCTGGCATATTGCTGT + 45380_PtRNAdb chr-1.trna14-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 14 14318700 14318772 Ala TGC 0 0 69.1 43.30 25.80 Inf Ala 101.9 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGtACAGGGTTCGATCCCCTGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTGTTACATGTGCAACACTTTCGTTAAATCTGGGTTGTCAACTGGATTCTTTTgcctataatttaattatatacaaGTAAAAATCAAATTGGAGCAACAT TTTTATGTCCATTTAGCTGGCTACTCTATAAATGAGAAAACTCCAATGTCTATCATACTTAGTTTGGAAGAAATCTATATTTATCAATACTATATTGGGT + 45381_PtRNAdb chr-1.trna15-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 15 14420938 14421019 Ser GCT 0 0 77.0 41.10 35.90 Inf Ser 105.6 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGTTTCACCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. TGAAAATATTACTCTTATCTTATGTTAAACGTCATTTTGATTTATAGGTCAAGTTTTCTATACctttaataaatgttaatttctgCTCCTAATATCAATA tttttagtttttctaatATTTGTTTGCTTGTTGAATTTGAGGAAAATTATTTTGGTGGAGTTTTTTTgggtgtttattttattttatttttttgaaattc + 45382_PtRNAdb chr-1.trna16-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 16 18359280 18359361 Ser GCT 0 0 39.3 20.40 18.90 Inf Ser 69.8 Phanerogamae -NA- Dicot GATGCTTTGGCCGAGTGGTtAAGGCGTGTTCCTGCTAAGTACATGGGTCTTCCCTgCGAGAATTCGAATCTTTCAGGCGTTG 82 >>>>>>>..>>>..........<<<.>>>.>.......<.<<<..>>.....<<...>>>>.........<<<<<<<<<<<. TGAGGTTGGTACCATATTTTCCCCCCAACTGCACCTCACTGGCATGCAAAGCCAAACCAAAAGAAGCCTTAGATTAATAGCGTTCATGGTAACATCGGAA AAACAATTTTTTGTCAATTGTATTATCCAATATTACCAAAATGGCCTTCCCCTCTGATTGCAAACTGGAAACAAGCTTATTTGTTTGAGAACGTAATTAA + 45383_PtRNAdb chr-1.trna17-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 17 21436035 21436108 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATATAACGAGTGGTGATTACAAGTAGTGAGCTAAGTTGTCAATATCATTGCCTGTATTTTCCAAGCTGTTTTATGCAAATATTCAGTTCGATATCCCACA atttttttaaatattttctccCACAAGGCGACAACAGGGTTGACTGTAGAGGAGAATAGTGGACCACAATCTTcaaatttttctctcttggaaacCCGGG + 45384_PtRNAdb chr-1.trna18-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 18 21558758 21558829 Gly CCC 0 0 58.0 26.70 31.30 Inf Gly 79.1 Phanerogamae -NA- Dicot GCcGCATCTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGaCCGGGGTTCGATTCCCCGGATGCGCA 72 >>.>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CCAACAATGAAAAGTGGAAAGAACGCTTTCACCACTGTATCTCAGCCTTCAGTCAGTTCAAGTTTTTGGAAAAAACTGTGTTAAAATCGAAGGGGCATAG TTAGATTTTATATTAGTCTTTTTTGCTCATTCAGGCGACGTTTGAGCGTTTGGTATGGGTGATAATTGGCATTCAATTTCAACTGTCACACTGCATTTTC + 45385_PtRNAdb chr-1.trna19-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 19 22590652 22590724 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGGCTTGGGTCAGTTCGAGGCAAACTATCAAGATTTGTAACATGgtcaaaatacaaaattaaatatactaaaatttgTTTCTAAGACCTAAAGTCGTCC TTCgctctgttttatttttgagtattcATTCAACTTACGGGGATGGTTGGGTTTTTGTTCATTCCAATTTATAGGGTTTGtagaataatatcaaatttaa + 45386_PtRNAdb chr-1.trna1-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 1 1640235 1640306 Pro TGG 0 0 69.2 36.90 32.30 Inf Pro 112.8 Phanerogamae -NA- Dicot GGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAACGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttaaattgtcttgccaaataaaaaaaatagttgggTATCAGCTGGTAGCTCTCAAACTATGATATggtcttaaattttataattacaaattattcaaAGT TTTTTCAGTCACTTCCGAATTCTTGTTTGTTTTTAGCAAATAGAGTTGAAAGACTGAAAGTTATGAGACTTTTGCTTGTCCTATTTGTTTTGCTcgtcct + 45387_PtRNAdb chr-1.trna20-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 20 22690581 22690652 Gly TCC 0 0 65.5 44.30 21.20 Inf Gly 79.2 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCAGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>.>>.......<<.<<<<<<<<<. TAAACTTGTGGATGGATTCCTCTTGCCTCCTTTTACCAgtcaatatttgaaaatgtttcttCTTTATTAATATCGATCAATTGATGTAGTTACCGGCAAG ATAGCattatcttcattttcttttttgttgggCTTCGGAGTTTGGGCACTCGGGGACTTCAACAGGCCCTATGTTTGTaagttacatttttttttttata + 45388_PtRNAdb chr-1.trna21-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 21 22690792 22690863 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GTTTGGGCACTCGGGGACTTCAACAGGCCCTATGTTTGTaagttacatttttttttttatacattttgtgaATATAATTAGCCGGGGTCTATTTAATGAA ATAGCTTAATTATCTGTTTCTGATTTTGTTGGGTTCGTAGTTTTGAGCACTTAGGGACTTAACAGGCCCTAATAtagttaatataatttacttttttttt + 45389_PtRNAdb chr-1.trna22-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 22 22691006 22691077 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTGAGCACTTAGGGACTTAACAGGCCCTAATAtagttaatataatttacttttttttttaatatgctGAGAATTGTTAACTGAGATATATCGCCAACGAA ATAGcaatagttttattttcaatttcctttttggGTTTGGAGTTTGAGCACTGAGGGACTTCAACAGGCCCcaatatagtttatattttcGTACTATAAT + 45390_PtRNAdb chr-1.trna24-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 24 23231229 23231316 Ser GCT 0 0 48.2 30.80 17.40 Inf Ser 47.1 Phanerogamae -NA- Dicot GGAGGGATGGCTGAGTGGCttAAGGCATTGGTTTGCTAAATCGACATACAAGAAAaTTGTATCATGGGTTCGAATCCCATTTCCTCCG 88 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.>>....<<<<<<.>>>>>.......<<<<<<<<<<<<. AGAGTCTCGCTCATAGAGGAAGAGTTCGCGCGCTAGCGCGCTACGGCTTACGCGGATCAGATAGCCCTTCGGGCGCGCATCAAATTTCGATCAACAACTT GCACGGAAGTCTAACGGGCAGGCGAAATTACGTGAAAGAAAGAACCTCTTGGTGGAGTCCCCCGGAGGACAGAATAGCACTACTTAGTGAGACGGAGCGG + 45391_PtRNAdb chr-1.trna25-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 25 23231664 23231737 Phe GAA 0 0 61.5 43.60 17.90 Inf Tyr 71.1 IPD:-23.60 Phanerogamae -NA- Dicot GTTCAGGTAGCTCAGCTGGTtAGAGCAAAGGACTGAAAATCCTTGTGtCAGTGGTTCGAATCCACTTCTAAGCG 74 >>>.>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<. GCGAAAAAAGCCCTAACATATTAGTAAGGGGCTTTTCCCTTACTAGTAAAGTGGTAAGGTAGGGCGCTATTCGATGAAGAAAACTTACTTTAGGAAAGTG GGCGAAGGGTCCAAAGGACACGTAGCCGAGAGCGAGCCggatttttaaattcaagtgaAAGAAGAAGGCAAAAAGCCGTATAGTGCGGGAGgcagattaa + 45392_PtRNAdb chr-1.trna26-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 26 23231957 23232031 Pro TGG 0 0 62.8 32.80 30.00 Inf Trp 73.3 IPD:-42.40 Phanerogamae -NA- Dicot CGAGGTGTAGCGCAGTCtGGTcAGCGCATCTGTTTTGGGTACAGAGGGcCATAGGTTCGAATCCTGTCACCTTGA 75 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTACTCGGATTGGTTCTCGCCCCCCTGTGCCCAAAAGGATGGGCGAGTTCGGTTCGAGTGTTCATCGATCGGGCGGATCTATATGCTTCGGGGGGTGAGA TGTGATGGGCTGAAATGCACAGCCCCGCAGCCTCGTTAGGCTCGCGAAAAAGACTTTTTCAACGAAGGCACAGATTTCATTGAAAAGGTACGGTGACGTA + 45393_PtRNAdb chr-1.trna27-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 27 23342432 23342505 Met CAT 0 0 47.7 22.70 25.00 Inf Arg 53.7 IPD:-27.70 Phanerogamae -NA- Dicot GGGCTTATAGTTTAATTGGTtGAAACGTACCGCTCATAACGGTTATAtTGTAGGTTCGAGCCCTACTAAGCCTA 74 >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<. taattgttcATTCCTGGGAAGAGGAAGAAGCAGATAGAGCAAAGGCCCCCTTTCCGTCCGCTCTTCCCGAAGTGAGCAAATTGCATGTAGAGATCCGTAG CCACCCCTTCTCTTCACCCGATATAAGGCAGGCGAAGTCCCCGCCACCCTGCAGATCTCAATCTAGCGACGGCACCTGGAACCACACTGCTGCCGCTGCC + 45394_PtRNAdb chr-1.trna28-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 28 23450372 23450444 Met CAT 0 0 48.1 24.40 23.70 Inf Thr 59.4 IPD:-30.50 Phanerogamae -NA- Dicot ACCTACTTGACTCAGCGGTtAGAGTATCGCTTTCATACGGCAAGAGtCATTGGTTCAAATCCAATAGTAGGTA 73 >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<. GGGTGCTTATCCCTTACTTCTGCTTCCTCGGCATTCAGTGAaaggctttttctttttcttatcttATAGGGGTCTATTTTCTCTGACTTAACTCAGCTTG GAAGCGGTCGAAACCCCTGCTCTAGCTACTTCCCATCTCTACGAATTCGGGCGGGCGAAGGGTCAACTCTACTTATACTTAGCGAACTGGTCTCAATGCA + 45395_PtRNAdb chr-1.trna29-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 29 23474452 23474530 Pro TGG 23474490 23474494 31.6 10.20 21.40 Inf Ala 45.5 IPD:-7.10 Phanerogamae -NA- Dicot AGGGATGTGGCGCAGCTtGGTAGCGTCTTTGTTTTGGATACAAAATGtCACGGGTTCCAATCTTGTCATCCCTA 74 >>>>>>>..>>>>.........<<<<.>>>>>............<<<<<.....>>>>>.......<<<<<<<<<<<<. aaaagaagAAATGGCAAGATAAATTGGATATCGATGGAGGAAATAACGATGTGGAAAACAGGGCAGAGATTCTCTACAATGACACCGTAGACCAATTGAA CCTTCTCCTCTGGGCAGTAACGAAGGTTAAGATCGATTCAAGACAtgacaaattttgaatttaatgatACTAGATGCATGCAAGATGTAGTGAAGGTACA + 45396_PtRNAdb chr-1.trna2-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 2 1979430 1979501 Asp GTC 0 0 68.0 45.30 22.70 Inf Asp 90.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTTCCGCCTGTCACGCGGACGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TGGGCCTTGCTTAATTCATAAGCTTTTATTGGGCTTGAGGTGTTAACAAGCAAAGAAATCTGTcgtaaaattttagtttttagcaACCATCCAACAAGTG ttagttttttatttttctgtattCACTGCTCAGAATACGACGTCGTTACGTTTCCCTCCAATCTCTTGTCTCTGTTTGTGCCTCAGAACTCCTCTCCACC + 45397_PtRNAdb chr-1.trna30-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 30 23474675 23474748 Trp CCA 0 0 70.1 43.00 27.10 Inf Thr 71.6 IPD:-17.70 Phanerogamae -NA- Dicot GCGCTCTTAGTTCAGTTcGGTAGAACGTGGGTCTCCAAAACCCGATGtCGTAGGTTCAAATCCTACAGAGCGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AtgacaaattttgaatttaatgatACTAGATGCATGCAAGATGTAGTGAAGGTACAAAAATCATCCTTTTCTTTACAATTGTATCTACTGTGATAAGAAA ATTACGAATCAACAGACCCCATTACCGAGATATGGgaactcaaataaataaaataaaaaaattgtatcgAATCCATTTTCTATTTTGGAACGAACAACAA + 45398_PtRNAdb chr-1.trna31-Val-GAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 31 23483890 23483961 Val GAC 0 0 30.9 10.80 20.10 Inf Cys 28.6 IPD:-32.10 Phanerogamae -NA- Dicot AGGGATATAACTCTGCGGTAGAGTGTCACCTTGACGCGGAGGTGGtCATCAGTTCGAGTCAGATTATCCCTA 72 >>>>>>>..>>>>.......<<<<.>>.>>.......<<.<<.....>>>.>.......<.<<<<<<<<<<. GATATCTATATGATCCGGCCAATTGCGTAAAGCCCGCGCTAGCAACGGAACCGGGAAAGTATACAGAAAAGACAGTTCTATTTCTTGATGGGGGCAGGGA AACCCAATGTGAGTTTTCTTTTGCCTTGCACCCCTCCGTGAATGGGAACCCTCAAGCCCACTTTCCCACCCCGCCCCGTAGAGGGAAATTTACCTGTGAA + 45399_PtRNAdb chr-1.trna32-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 32 23494712 23494785 Asp GTC 0 0 35.9 20.90 15.00 Inf Ile 41.3 IPD:-33.90 Phanerogamae -NA- Dicot GGGATTGTTGTTCAATTTGTcAGAGAACCGCCCTGTCAAGGCGGAAGtTGCGGGTTCAAGTCCCGTCAGTCCCG 74 >>>>>>>...>>>.........<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTCCTTTCCATGCTGCTCCTTGTTCTAGCTcatctttattcttttccaaCGGCTTCAAATGAAGTAGGTGAGGAGAAAAGAATTTGAAGGTTGTAGACCA ACCTATGATCCGAGAAAGATATATCAATTCATCTCTCCGGGGAGAGAAAGAGTTGGATCTAATTTCCCAGCCTTCTTTCGTTTCGCATTTCTCATCGGAC + 45400_PtRNAdb chr-1.trna33-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 33 23582681 23582754 His GTG 0 0 49.4 34.40 15.00 Inf His 54.3 Phanerogamae -NA- Dicot GCGGATGTAGCCAAGTGGAtcAAGGCAGTGGATTGTGAATCCAcCACGCGCGGGTTCAATCCCCGTCGTTCGCC 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<.<....>>>>>.......<<<<<<<<<<<<. CAACTATAGTATAGGAAAAAGCTTCTCTTTGATAGCGGTCATAGGGGGTTCAGAAAGGATCTGATCGTAGATAGAGACTTAAACCTGTGTGGGGGTAGGG CATCAATAAATGGACCATTTGTTACGGAGACACAAGACAACCCTAGAAAGCATTTTTCTGCAAGTAATCTCGAGGCTTTCAAACGCATCCAAGCAATTGG + 45401_PtRNAdb chr-1.trna34-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 34 23651387 23651459 Met CAT 0 0 54.9 24.10 30.80 Inf Thr 67.6 IPD:-30.80 Phanerogamae -NA- Dicot ACCTACTTGACTCAGCGGTtAGAGTATCGCTTTCATACGGCGAGAGtCATTGGTTCAAATCCAATAGTAGGTA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTCTTTCTTAGCGCTCCGCCCCCCCTTGTATAGTAAGTGGGACTCTGGTTGCGCGGCTTTTTCTTATAGGGGTCTATCTTCTCTGACTTGACTCAGCTTG AAACCGGCCGAAACCCCTGCTTTTGCCAGCATGACAGCAAGCACGGACTGGCAGCAAGGAGTCAACTGAATGACCAAAGCATTGGTTGCTTCCACTTGTG + 45402_PtRNAdb chr-1.trna35-Sup-TTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 35 23676585 23676675 Sup TTA 23676621 23676634 25.2 13.50 11.70 Inf Cys 32.0 IPD:-32.00 Phanerogamae -NA- Dicot GGCCCTTTAACTAAGCGGTAGAGTCGCGCTCTTTAAAGGCGTAAGtCGTCGGTTCAAATCCGATaaaaaAAGGGCTT 77 >>>>>>>..>>>.........<<<.>>>>>.....................<<<<<.....>>>>>.......<<<<<.....<<<<<<<. CACGAATGATATACTtactatattattataagaaaatagatctttataaatataaatgcaGTAAACTCATAGTGGGCTAATTCatgaattgaatcaaatg ttctattttttacgAAACTCCTGTCTTagtcttcattttctttttcagcaGAGAATATAGATATGAAAAAAAGGTAACCGCCTGGtgagtagtttttttt + 45403_PtRNAdb chr-1.trna37-Leu-CAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 37 32717683 32717763 Leu CAG 0 0 69.8 47.20 22.60 Inf Leu 110.3 Phanerogamae -NA- Dicot GTCAAGATGGCCGAGTTGGTctAAGGCGCTAGTTTCAGGTACTAGTccgaaaGGgCATGGGTTCGAATCCCATTCTTGACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. tttttaactAATCACTTTAGAATTagcatatttgtattttattagaagACTTGCTTTGTTCTTTTAATGATATTCTTAGAATCACCTACTAACATCAAAT ataataaaattttacacttttttatcATATTAGAAACGGGGCTTCCAATTCTTTATCATATTGATGCTTGCTGAATAGTGTTGGGCCAAACTAAATAGTC + 45404_PtRNAdb chr-1.trna38-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 38 40298152 40298225 Val AAC 0 0 72.2 47.80 24.40 Inf Val 98.2 Phanerogamae -NA- Dicot GGTTTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGAAGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTATCCTGATAATATCTAAAATTTGGGTTTCTGCACATTTTACTTTTTAGGCTAAACAAAAATAGagatataaagaaaaatttgagACGTTTATCGATGT TTGCttcaaacatatttttagtctttttagTTTCTGcacattttagttttttgaCTAAAATAAATGTCAAAAGCTAGTGAGCGTGGTTTCGTGGTGTAGT + 45405_PtRNAdb chr-1.trna39-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 39 40298310 40298383 Val AAC 0 0 64.9 40.50 24.40 Inf Val 91.6 Phanerogamae -NA- Dicot GGTTTCGTGGTGTAGTTGATtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGAAGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGTCCGGGCGAAGCCATTGCttcaaacatatttttagtctttttagTTTCTGcacattttagttttttgaCTAAAATAAATGTCAAAAGCTAGTGAGCGT ttgttttaaacatgtttttagtCTTTTAGTTTCTGcacattttagttttttgaCTAAAATTAAATGTCAAAAGGCATCGACTCTGGTTTCGTGGTGTAGT + 45406_PtRNAdb chr-1.trna40-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 40 40298468 40298541 Val AAC 0 0 72.2 47.80 24.40 Inf Val 98.2 Phanerogamae -NA- Dicot GGTTTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGAAGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGTCCGGGCGAAGCCAttgttttaaacatgtttttagtCTTTTAGTTTCTGcacattttagttttttgaCTAAAATTAAATGTCAAAAGGCATCGACTCT TtgttttaaacatatttttagtcTTTTAGTTTCTGcacattttagttttttgaCTAAAATTAAATGTCAAAAGGCATCGACTCTGGTTTCGTGGTGTAGT + 45407_PtRNAdb chr-1.trna41-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 41 40298626 40298698 Val AAC 0 0 54.6 32.90 21.70 Inf Val 82.7 Phanerogamae -NA- Dicot GGTTTCGTGGTGTAGTTGGTtATCACGTCAATCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGCGAAGCCA 73 >>>>>>>..>>>...........<<<.>>>.>.......<.<<<......>>>>.......<<<<<<<<<<<. AGTCCGGGCGAAGCCATtgttttaaacatatttttagtcTTTTAGTTTCTGcacattttagttttttgaCTAAAATTAAATGTCAAAAGGCATCGACTCT TTtctttaaacatatttttagtcttttagtgtctgcacattttatttttttgattaaagttAAATGTCAAAATCTATTGACTCTGGTTTCGTGGTGTAGT + 45408_PtRNAdb chr-1.trna42-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 42 40298783 40298856 Val AAC 0 0 72.2 47.80 24.40 Inf Val 98.2 Phanerogamae -NA- Dicot GGTTTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGAAGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAGTCCGGCGAAGCCATTtctttaaacatatttttagtcttttagtgtctgcacattttatttttttgattaaagttAAATGTCAAAATCTATTGACTCT ttgcttttaaatttataaaaaaaccaaaaattaccTTACGCTGCTGCTGGAGATCGAACCATTGTCGTCCGCGTGACAGGGTTCTAACCACTACACTAta + 45409_PtRNAdb chr-1.trna43-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 43 40807492 40807565 Ile AAT 0 0 79.3 55.80 23.50 Inf Ile 104.3 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTAAACCTTATCGATTCAATCGGTCACCCTGCAGTTTTGAAATGtccttcctttttttaaaaaaatactattaacattttattgaaaacatATCGTCGCA atttttatctttttttatttagtgtGCTTGGGCCAATAAGTTCTGAACTTTTGGTTATTGATTTCTAGCCGAAAGCCCATCTAATTGTTCAAAACTTCTA + 45410_PtRNAdb chr-1.trna45-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 45 43394703 43394776 Arg ACG 0 0 46.0 38.00 8.00 Inf Ile 55.5 IPD:-22.80 Phanerogamae -NA- Dicot GGGCCTGTAGCTTAGAGGGTtAGAGCACATGGCTACGAACCACGGTGtCGAGGGTTTGAATCCCTCCTTGCCCA 74 >>>>..>..>>>>.........<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<..<<<<. CACTTCACACCTCGAAATGTACCGTTCTTATAGAGAGAAAGGCACTTTCACATTTTCTTAACTCAAAATGGCTGGGAACAGATTTAATGGAGACGAGGTA CAACCAGCCAAAAAGGAAGGACCTTTCCCTTTGGGTGTAGGAAAATCATGATGGGATAGCGGACCCAAAGTTATGGAACTTGGGCGTGGGTCTTTTGCCG + 45411_PtRNAdb chr-1.trna46-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 46 46880265 46880345 Leu CAA 0 0 47.3 28.60 18.70 Inf Gly 62.7 IPD:-28.70 Phanerogamae -NA- Dicot GCCTTGGTGGTGAAATGGTaGACATGCGAGACTCAAAATCTCGTGCTAAAGAGCGTGGAGGTTTGAGTCCTCTTCAAGGCA 81 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<. ATTGTTTTCAAGATTCAAACATATTTGCTCTATTTAGGAGTGCAATGTGccttaaaaattaatgtacCCATATTCATGGAACACGATTCACTTTCAAGAT TAATATTGAGAATGCTCATTGAATTGGAATAAGTTCTGCAGTGGATCATGGGATCTTGGTGATCTTCTCTACCTAATGAATGGGGAGTCCACTTTGAAAT + 45412_PtRNAdb chr-1.trna47-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 47 47173817 47173903 Met CAT 47173855 47173867 64.2 40.70 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>......................<<<<.....>>>>>.......<<<<<<<<<<<<. GAGGatagaattttaataataataatttatacaaaatgcTTCTTTCTTTGGGATTGTCactagtaattaatatttttaatatgcatGGAAGATACAACGA accaatttttttaatttttaaataatgaacGCCCAACCATTTTCATTGCTGAGAGTACATATTGCTGAGAATATGATGAGTACTTGATGTGAACTAGCAT + 45413_PtRNAdb chr-1.trna48-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 48 47175669 47175755 Met CAT 47175707 47175719 61.7 39.80 21.90 Inf Met 95.5 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCATCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>......................<<<<.....>>>>>.......<<<<<<<<<<<<. ATAATAAATGCTTCTTTCTTTGGGATTGCTTCCGTTTATCTCCTGAGCTTCCTGCTTATCTCAAAAATTAATACTTCAATATGCGTAGAAGAAACAACGA ACTAGTATTTTTTCATGTTATTAAATAATGAACGCCCAACCATTACATATACCCTATGTGATCTTTAACAGTTTTTGTTGGAATAAAAATGTCCAAAAAA + 45414_PtRNAdb chr-1.trna49-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 49 48187625 48187697 Glu TTC 0 0 36.8 12.60 24.20 Inf His 57.4 IPD:-20.10 Phanerogamae -NA- Dicot GCCCCCATCGTCTAGTGGTtcAGGACACCTCTCTTTCAAGGAGGCAgTGGGGATTCGACTTTCCCTGGGGGTA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aagatgaaaaaagcTTTTGGCTCTAGTCATTCCATTATATTGACAATTTCAAAAAACTGCTCATACTATGAGCATAGTATGGTCGCGGTTAGGCAAGTAT GGGTACTACAAAAGGAAGTTGATCATGGATTATCAATAAATCTAGAATTGATTCTTCCTGGGTCGATGCCCGAGCAATTAACGGGGACGGACTATAAATT + 45415_PtRNAdb chr-1.trna4-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 4 3040697 3040768 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CATGCATCAAAACCTGAGTAGCTGTAATCACGCTTCTACACTTCAAATATTATATCTGGTTTCGGCTATTATGGCAGATTAAGTGACAACCACATATCAA TGGTTTTTTTATTCGAAACGGTGTTCTTTTAGAAccccaaaacaaaaaagaaccTTCTACATATATAACGTTAGAACTGTGTCTATGGAGATAAAAAGTA + 45416_PtRNAdb chr-1.trna51-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 51 54415087 54415158 Thr TGT 0 0 79.3 49.30 30.00 Inf Thr 92.3 Phanerogamae -NA- Dicot GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGtCTGTAGTTCGATCCTGCATGGGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AATCTTTTCCaagattaattattaaaaatcatcataATATATGCAGCGAACCAATTAATATATAAGATATATAAGATATCTCTTTGCATCTATAACAAAA ACATTTTTAAGAAGTGCCTTCTGTCATTGTTTTTTCCGAATCTTCTCTGTTTATCGTCTTATAATTCAATTGCTGCTTTTCCTGCTCACTTTTCGACTTG + 45417_PtRNAdb chr-1.trna52-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 52 55137648 55137577 Asp GTC 0 0 67.8 44.80 23.00 Inf Asp 92.9 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGCGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ACAAAATGAATAacttaaattttcgacattttgaaaaatttatatgCAGAAGGTTGCATCTATCCAATTAAAACAGAAAAGATCAAGCGTATGCTAATGT tTAATATCTTTTTGGAAGTTTTTTACATTGAACAAAAGGTGTACgaaataatcaattattttacaaaaatggtACAATCGATGGAATAAATCTAAGACAA - 45418_PtRNAdb chr-1.trna53-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 53 54414148 54414077 Thr TGT 0 0 79.3 49.30 30.00 Inf Thr 92.3 Phanerogamae -NA- Dicot GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGtCTGTAGTTCGATCCTGCATGGGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. agaggACATTTTTATGAAGGAATATAAGATATTATAACGTTTTTATGAGTTGTAAACCTTTTGTgctatataaaatattaactgTACAGTGACAACAAAA ATAGTTTTTCAAGTTTATCAAGCCATAtctataaatttcttttataactTCAGAGTTTATAAAAGtcattgaaagaaaaataaaggttaaaatatgccta - 45419_PtRNAdb chr-1.trna54-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 54 53865195 53865124 Pro TGG 0 0 69.2 36.90 32.30 Inf Pro 112.8 Phanerogamae -NA- Dicot GGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAACGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. atagaaaaaccttaaatatgatttatgattattgttttgttaGCCTACTTAAAACTGTTCTCGTGGGTAAAAATTTGTTTACTAAGGAACGTATCAAATT TCCTTTTTCCTCACCTACTTTTACTTTGGTTAAAATGTGCTgttagtccctaaacttctataaactttgagatttaatccctataagggctaaatttcaa - 45420_PtRNAdb chr-1.trna55-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 55 48285283 48285203 Leu CAA 0 0 29.0 21.00 8.00 Inf Gly 26.0 IPD:-23.30 Phanerogamae -NA- Dicot GTCTTGGTGGTGAAATGATaGACATGAGAGACTCAAAATCTCGTGCTAAAGAGCATGAAGGTTCAAGTCCTCCTCAAGGCA 81 >>>>>>>..>>>..........<<<..>>>>.......<<<<..>>>....<<<..>.>>>.......<<<.<<<<<<<<. TATGTCAATACAAATACTCCAACACTCCACATTTGTCATATATTCCATACATCACATTAGATAGATATTATACTCATGAAATACGATTCACTTTCAAGAT taatattaaaaatgctcATTGAATTGGAATAAATTCGGTAGCGGATCACGAGATCTTGGTGATCTTCTCTATCTATGACTGGGGAGTCCGCTTTGAAATC - 45421_PtRNAdb chr-1.trna56-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 56 48064475 48064403 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gatattattatacctttgcGGTTGGTTGTTTCATTGTTGAATACGAAAATCAAACCAATAAAATGAGCCATTTAAAATATCTGACAAACGATTACCGAAA atttttattcattcttttcaattatatttatcaattatCAATAATATCCCTACAAGTCAGATAttccaaataaataataataaatcagtATCCCCAAACA - 45422_PtRNAdb chr-1.trna57-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 57 47598142 47598066 Ser AGA 0 0 33.0 27.70 5.30 Inf Pro 60.7 IPD:-60.70 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGAGTGCGAGAGGtCCTGAGTTCGATTCAGAATATaaataacCCA 77 >>>.>>>..>>>.........<<<.>>>>>.......<<<<<.....>>..>.......<<<<<<.<.......<<. atgtgaatattataatgtcaccaagtcaacaataaaaaaaaattccaaacaattatatgcaatattcgcttaagggaatatgtcaaaatcttcaaacata ATACTCTTTTGATTTAtatgaaacaaaatatttgggcatacaCCACATATGTgaccaataatctttcatatcacattgataacataagttatctttaccc - 45423_PtRNAdb chr-1.trna58-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 58 46967706 46967634 Lys TTT 0 0 88.7 64.40 24.30 Inf Lys 93.7 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GCTTTCGGAAATTACTAACTTAGACTGCTCCGGAAATTTGAAGTTGGTCTTGTGTTAGATATACCAaacaaatataaagaaataaatgaaacacATGTAG TGTGCTCCTCCTTAGTTTTACTCTTTTTCATGTCTCATCCAATACCATTTTTAGAGTGCAGCTCCTTTTGCAGTTGTCTTCTATGCAACGGCTATAGCTT - 45424_PtRNAdb chr-1.trna59-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 59 46506341 46506269 Lys TTT 0 0 88.7 64.40 24.30 Inf Lys 93.7 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GCCAGCCCCCAGCTTTaagtaaacataaaaatatcatatcaatcAAAACACCTAATTTACTCTGCGTTAAATTGACAACAACTGCAAGTTCATCAACAAT TTATTCAATGTAGATTTCGCAGAGCAGTGATGTTTTCTAAACAATGTTTTTATGCTCCCAATTCTTCTGATTTTATCACTAACCTATTGGTTTAATTGGC - 45425_PtRNAdb chr-1.trna61-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 61 37295465 37295392 Thr TGT 0 0 45.4 38.30 7.10 Inf Thr 42.6 Phanerogamae -NA- Dicot GCTCGCTTAGCTTAGAGGTtAGAACATCGCATTTGTAATGCGATGGtCATCGGTTCGATTCCAATAGcTGAGTT 74 >>>>>>>..>.>>........<<.<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<.<<<<<. ttaataattcatattaattatGAATAACTAATATATAGTTAATAGATAAGATCCTAATAGTTTGTTGAATCCTTATGGATACCAAATTTCTATTATTTGA TCcctatttgtttgcttttttcctttttaaataatttagattttttttttaaatcaaagaACAAACAGTGAAAAAgctttttccccttttctttccAACT - 45426_PtRNAdb chr-1.trna62-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 62 30762695 30762622 Gln TTG 0 0 26.9 15.40 11.50 Inf His 25.3 IPD:-5.90 Phanerogamae -NA- Dicot TAGGGTGTGGCCAGGTGGTAAGGCAACGGGTTTTGGTCCTGTTATgTGGAGGTTCGAATCCTTCCGTCCcacAG 74 >.>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<...<. TCCCCCAAAACCATATTTTGATTGCGCCTCAACTATTTCAACTATTGACGAACAAGGAATACCTATATTAGTGTTTAGTAGTTTCAAATAGAAATCTAAA CATACtctatttatatttcaaaataaccATATCCGAATCTAAATTgctcattttttgtttttaataactTTCTTTCTAATAGTCAAGTATTGGAGAAAAT - 45427_PtRNAdb chr-1.trna63-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 63 29827285 29827204 Ser TGA 0 0 81.2 47.30 33.90 Inf Ser 117.6 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTTGAAATCTGTTGGGCACTGCCCGCGCAGGTTCGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AACTGGTGACaacacaaattttattttggcagTTATTACACTCCTCTCTTTAGGGTTGGGAGTTAtgattaacttaattttaatgaaTCCATTAATCAAG GTTTCCTTTTTAATTCACATtgttggtcactcaactttcataaattttcattttgggcacaaaaaatttaaaatttgtaattggGCACTGCTATTAACAG - 45428_PtRNAdb chr-1.trna64-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 64 28384699 28384626 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTATCGTGTCTATTTGCAGGCTTATTGCCTGGGTCACCACTCATGTAAGACAaatcataaataagaaaatatttctgTTCGTTCAGAAAGCGGTAACCAT TTAAAGTTTTTTACCTTTTCTGCGCAATAGTGTCCTCTAtaataaagggaaaaagaaaaggaaacaggGTATTCATGCTTTACGGACTTCTACGACTTAC - 45429_PtRNAdb chr-1.trna66-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 66 24654722 24654650 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GGATTCTGCTGTATAGCAACGTCACTGAGTCGTGCGTATGGTGGATCACAAGGACTTATTAATGTCTATATATAatcatcttaaaaataaaaagcaacaA TTTTAGTTCGCATTTTCTGTCGGCTTTTTCACATAAGCAAAACATATTGTCCTTGGTATGGACTATGGAGGGACTTGCTGGATTTTCCGAGACACAATTA - 45430_PtRNAdb chr-1.trna67-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 67 23818761 23818690 Gln TTG 0 0 50.5 17.00 33.50 Inf Gln 54.2 Phanerogamae -NA- Dicot TGGAGTATAGCCAAGTGGTAAGGCATCGGTTTTTGGTACCGGCATgCAAAGGTTCGAATCCTTTTACTCCAG 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACTTGCTATATCCCCGCGTTCTTGCACGGCTCGGCTCGTTCTTCGAGCCCTGCTTCTCCCTTCCCCCTCTCCCCGTTCTTACCGTCCAAAACAGGCCGTA ATTATGAACACCCGATCGGATCTGTCAAGAACGAGCTGACGACTACAGGGGAAGCGGCTGACTGCAGTCCCTGAGCCCAGCTTGTAGCAAGCCAAAAGTT - 45431_PtRNAdb chr-1.trna68-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 68 23676388 23676315 Asp GTC 0 0 61.5 43.00 18.50 Inf Ile 61.7 IPD:-24.70 Phanerogamae -NA- Dicot GGGATTGTAGTTCAATCGGTcAGAGCACCGCCCTGTCAAGGCGGAAGcTGCGGGTTCGAGCCCCGTCAGTCCCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CGTGTCTCTGTTACAACACGGCGAAACTAAATGGTTCGAatgaaatccaataaaataagaaaaataataagaattttgaggCTGTACACCTAATTTTCCT ACCTAGGATCCGATGAATCGATCAATTCATCTCTTCATTTTctgtaaaaagaaaagaagagacaAAGAGTAGGATCTAATTCCCAGCCTTCTTTCGTTTC - 45432_PtRNAdb chr-1.trna6-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 6 5694601 5694673 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AactagtattttaatttaataacctATCGTTGCGGGCTTCAAGTTTCCTTTttctgtatttattttttttagtaaatatattgCGTCGCATACGCAACAA caattttgaaattaaactaAACCTGATGGATAAAAAGCAGGGGCCTGTTTCCTTTATCATGAACCGGTCTCTCGTAAACCTCAGGGATATTGGAGTGATC + 45433_PtRNAdb chr-1.trna70-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 70 23645773 23645702 Gly GCC 0 0 62.2 41.60 20.60 Inf Thr 60.3 IPD:-27.70 Phanerogamae -NA- Dicot GCGGAAATAGCTTAATGGTAGAGCATAGCCTTGCCAAGGCTGAGGtTGAGGGTTCAAGTCCCTCCTTCCGCT 72 >>>>>>...>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<<<. TCGATCGGGGGTCAAGAGTGCGGTCCGGCGGAAAAACAGAAGTCGTCCGTATCAAGTAATACGTGAATTGCTCAGTAGTGCTTCGCCACTACCGTAGCTG CCTGGCTTCGTCGTTTAGTGGTAACGAGTGGAGTGCATAAGCCCCTTTAGAGAGAGGGGCGAGCAGCAAGCAGACCCTTGTATAGGGTTCCAAACCTATC - 45434_PtRNAdb chr-1.trna71-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 71 23616989 23616917 Lys TTT 0 0 80.3 61.50 18.80 Inf Lys 78.3 Phanerogamae -NA- Dicot GGGTGTATAGCTCAGTTGGTAGAGCATTGGGCTTTTAACCTAATGGtCGCAGGTTCAAGTCCTGCTATACCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTAAGGCCGGCTTTAGAGCCCAAGCCCCTTTAATATGATGAGAAGAAGAGGGGCCGCCCTCTTTTCCGCACCAATCCTTATTTACTACTACATCTTTTTT AACCTACCTTACGCTATACTATTAGTAAGGATGCGTAGTAGCGTTCAAAGATCACTCTTTGGCCTTTAGACTCGCTTCAGCGACTTCGCCCTTTAAGTGA - 45435_PtRNAdb chr-1.trna72-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 72 23616081 23615995 Ser TGA 0 0 60.9 30.90 30.00 Inf Ser 60.9 Phanerogamae -NA- Dicot GGATGGATGTCTGAGCGGTtgAAAGAGTCGGTCTTGAAAACCGAAGTATTGATAGGAATACCGGGGGTTCGAATCCCTCTCCATCCG 87 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>......<<<<<.>>>>>.......<<<<<<<<<<<<. CAATAGAGTCCGCCGATAGGCGCAAGCAAGCGTAGCGAATCACATAGATAAGCCCCTACCTGCCAGCGCGCGGATAGATAGGGCGGGCGAAGCGCGAAGG CGAAGTCATAAGTTCTCTCTTGCGTTATCTATAGATAAGAACGAATCGGATCGACTCGACTGATATGATAGATGGAATGGGTAGCTTGTGTTATGATGTA - 45436_PtRNAdb chr-1.trna73-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 73 23580669 23580598 Glu TTC 0 0 60.2 35.70 24.50 Inf His 67.9 IPD:-11.20 Phanerogamae -NA- Dicot GTCCCTTTCGTCCAGTGGTtAGGACATCGTCTTTTCATGTCGAAGaCACGGGTTCGATTCCCGTAAGGGATA 72 >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<....>>>>>.......<<<<<<<<<<<<. AATCGCCAACATGAACACAAACGAAATCTTGAATTGCGTATAGAAACAAAACGAACCACTTCTATTGTCGGAGCTGAGGTATATGAAGAATGGCTTTTTG GGTACTCATTCCCGGCCGCTTTCAGTTAGTGTTCATTGCTGAGTGATCGCTCGCTATCTGGCTGGAAAAGGTGGTCCGGAAGCTTCCTTTCTCCCAGCAA - 45437_PtRNAdb chr-1.trna74-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 74 23552368 23552298 Cys GCA 0 0 46.3 23.70 22.60 Inf Arg 41.0 IPD:-16.60 Phanerogamae -NA- Dicot GGCTAGGTAACATAATGGAAATGTATCGGACTGCAAATCCTGGAaTGACGGTTCGACCCCGTCCTTGGCCT 71 >>>>>>>..>>>>.......<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<<<<<<<<. GTCCCCTCTTCTCTGGTACCCCGCCACCGCATATGTAGAAAAAGAGGGAGCGGGGAAGGAAGAACAACCGTTTGACTTTGGCACATGAGGTGGCGGGTTT CGGGGAGTGGCGAGCTGCACGGAATTTGAATTAATCAAATGGCATAGCATAAGGGGGCTTTCCTTTGTTATAAATCCACAGACAACATACTGGAACTTCC - 45438_PtRNAdb chr-1.trna75-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 75 23550166 23550095 Asn GTT 0 0 75.1 52.10 23.00 Inf Asn 81.9 Phanerogamae -NA- Dicot TCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGtCGTAGGTTCAAATCCTACTTGGGGAG 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACCTTTTCCCCCGGTGTATGTGAAAAAGAGTGacgaacccattttttttcgGTCATAGGTTGGTCCAAAGAATGAGAGTCGGCTTCCTTAAGTCCGTTGT AATTTATAGTTATCGCTTTTCTGACCTAGCGACCCCTGCCCTTCTCCTTTGTTTCTAAACTAGCAGAATCGTGGGACATCAAAAGTGGGAAGTTGATTGT - 45439_PtRNAdb chr-1.trna76-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 76 23549199 23549117 Tyr GTA 0 0 63.3 45.30 18.00 Inf Leu 70.0 IPD:-5.00 Phanerogamae -NA- Dicot GGGAGAGTGGCCGAGTGGTcaAAAGCGACAGACTGTAAATCTGTTGAAGTTTtTCTACGTAGGTTCGAATCCTGCCTCTCCCA 83 >>>>>>>..>>.............<<.>>>>>.......<<<<<..>.>....<.<..>>>>>.......<<<<<<<<<<<<. ATGTTTTAATTCCCTTCAATCAAATCAATAAGCTTTTTGATTGATTCAGGGCGCCGCCCTCCTTCTTAGAACCCATTGAGGGGGGCCTCGGCCCGGGAAG CTTGTTTGTTGTAGACTTCAGAGAAGAGAAAGGAGGCATTCGTCAGCGTAGGAAGGCCCACCGAGCGAagctctttctttttttggggTGTGCCGTGAAG - 45440_PtRNAdb chr-1.trna77-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 77 23419701 23419629 Met CAT 0 0 53.4 38.30 15.10 Inf His 52.5 IPD:-13.70 Phanerogamae -NA- Dicot AGCGGGGTAGAGTAATGGTtAACTCGTCAGGCTCATAATCTGTAGAaTGCAGGTTCGAATCCTGCCCCCGCCT 73 .>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<.. CTATACAAGGCCGCCGCTTACTAAGCGCTGGTTCTATCCCGGCCAAGCAACCAAAGCCGGGAACCTAGGTGGGAATAGTGAAAGAAAGAGAAGGGGAAGA AATTACGTCAGATACTTGATAGAGTCCTGCTCGTGAATCGGGGTTCTCAATAGAGGAGAGCAAGACGATAGATGGAAAGAAGACCATTGGATAACAATAA - 45441_PtRNAdb chr-1.trna78-Ser-GGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 78 23199416 23199330 Ser GGA 0 0 64.5 34.70 29.80 Inf Ser 84.5 Phanerogamae -NA- Dicot GGAGAGATGGCCGAGTGGTtcAAGGCGTAGCATTGGAACTGCTATGTAGGCTTttgTTTAcCGAGGGTTCGAATCCCTCTCTTTCCG 87 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>.......<<....>>>>>.......<<<<<<<<<<<<. GTTTTATATTTCTAATGGATTGGGCCGTACCTTTACTGCAAGAATATGAATGACTCGCTATTCACTCGCGGTTTTTGGGTCATAATCATAAGATTATATA TACCCCTATCTTAACCTAATTCACCAACGTTACCGACCTCaatgtaaaaaataacaatGGAAAGGTCAATTTTCAATTTCCGATCTTTCTATTTGACCCA - 45442_PtRNAdb chr-1.trna79-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 79 23186930 23186857 Trp CCA 0 0 72.0 42.50 29.50 Inf Thr 75.4 IPD:-18.90 Phanerogamae -NA- Dicot GCGCTCTTAGTTCAGTTcGGTAGAACGCGGGTCTCCAAAACCCGATGtCGTAGGTTCAAATCCTACAGAGCGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGCCAAGGGCttctttattatataattatcttaTGCATGCAAGATGTATTGGGgtcacataaaatttattattattatgtttttattatgaaaataaaaa ATTCCATTCTTGTTAGATCGAGAATGACAATGAAATAATTGAACAGCAGTCTAAAGTCTGAATTTGACCTCCAGTTTGTTTTTTAgggttaatacaaaga - 45443_PtRNAdb chr-1.trna7-Thr-CGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 7 7895224 7895295 Thr CGT 0 0 82.0 57.10 24.90 Inf Thr 88.4 Phanerogamae -NA- Dicot GCCTTCGTAGCATAGTGGTAGTGCGTTCGCTTCGTAAGCGAAAGGtCGCGAGTTCGATCCTCGCCGAGGGCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. attattattgttttcttcGAAAAAGAAACTAGGGATTCTCATCAAAAGTAGAAAGATTTagtattaatatatatctaATTTACTACAGATTAAAGCAACT attttttgttttttattttcaacatttttttgttatatgggCCTTTGTTTTTTGGAAATCTTAACGTGCAGATTCAGCCCATAAGAAACATCCTTGCCTT + 45444_PtRNAdb chr-1.trna80-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 80 22181414 22181337 Glu CTC 0 0 50.6 31.00 19.60 Inf Glu 60.7 trunc_start:1 Phanerogamae -NA- Dicot CCGTTGTAGTCTAGTTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTTCCGGCAATGttttgcttA 78 .>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<......... TAATGCTATCTTTTGCAAACCCTGCTTACCACCCTctaaaaatgacaaataattaataaatagataaaaacaaaaataaaaataatcttacATCATCAAT ttttgttcttttcccCCATTTTgcttgcttttatttttgtttgtttgtttttttttctcatttttcttgcTTACTTTGTTACTGGTATGGGTTTTTGTTA - 45445_PtRNAdb chr-1.trna81-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 81 21674380 21674309 Lys TTT 0 0 26.4 11.60 14.80 Inf Gln 38.6 IPD:-38.60 Phanerogamae -NA- Dicot GCATCCATTGTCTAATGGAtAGGACAGAAGTAATTTAAACCTTTGGTATAGGTTCAAATCCTATTGGACGCA 72 >>.>>>>..>>>>........<<<<.>>.>>.......<<.<<....>>>>>.......<<<<<<<<<.<<. gaaaaaaatttcacatgTTCTTTAGTTTTCCCAaccaagagaaaagaaaaaaccgaacaagagaaaaaaaagtcaaaatatcaaaaaatcgTAATGAAAA atttagaatcaatttatcTATATTCCATTAAGTtagaattttctatttataattgTTCTTGAAGTAGAAAATGTTCCATTTATTCCTGAATAATGTCTTT - 45446_PtRNAdb chr-1.trna82-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 82 13660809 13660736 Gly CCC 0 0 21.4 11.60 9.80 Inf Thr 14.1 IPD:-19.00 Phanerogamae -NA- Dicot GTTAGTTTTGTGTAATatTTGTAACACATTGTACTCCCAATGAGAGGaCCCAAGTTCAAACCTTGGAGATGACA 74 >>>>.>>..>>>>..........<<<<.>>.>>.......<<.<<....>>>>>.......<<<<<<<.<<<<. CCCGCAATCTGACATTCACAACTAGTATCAAGATACTGAAATATAGGGTGTAATATCTGTAACATATTGGATTTTTTCAATGTAGAAAAGTTGTTTTTGG TTGTTGGGAGGGGTAACTACGAACCCCTTACATGGACTGTAAAATTGACATGAAGTATATAAAACAAAACCCAGTATAGACTTGTTGAAtaaagtttttc - 45447_PtRNAdb chr-1.trna83-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 83 12412754 12412681 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. cgccaaagaaaagaaataaaataaataatttcattggAAATATAAAGGCTATAACGTACGTTTAGATTTTATAAGATAGATTTAAAACCACAGATAAAAG TACCATTTTTGCAACTCTGAAGTCTATTTAGATTTTACATTTTTGCTTGAAAATCATTTAGTTTAACTACATAACAACATAAATgagtttgttaattttt - 45448_PtRNAdb chr-1.trna85-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 85 9286732 9286651 Ser AGA 0 0 77.1 42.80 34.30 Inf Ser 110.5 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. aattctgtaaaataaaaatatgaagccTTACATCttgattttgtataaaaaagtTTTGTATTAcagttaaaaacataaaatggaAAGTTGCCATCGTCAG TTTTGCTATTTTCGTTTGGGCTAAATTCATGTTTTGGctactcaactttaaaaagttataaaatattcactgatctatttgaaagttttcatttaagtta - 45449_PtRNAdb chr-1.trna86-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 86 8288457 8288384 Met CAT 0 0 37.2 25.50 11.70 Inf Thr 44.4 IPD:-47.70 Phanerogamae -NA- Dicot GCATCCGTGGATGAATGGTtAAAGCGCCCAACTCATAATTGGCAAATcCGTAAGTTCAATTCCTACTGGATGCA 74 >>>>>>>..>.>..........<.<..>>>>.......<<<<.......>>>.>.......<.<<<<<<<<<<. ATGTCCTTTCATTGATTCCTCTTAAATTGCATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTACGAGAATCCCCGCTAA CGCCAATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCAGTATCAATGGAATCTCATCATCTATACATAACGAATTAGTGTGGTATATTCATATCATA - 45450_PtRNAdb chr-1.trna87-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 87 6288372 6288301 Thr TGT 0 0 84.3 58.00 26.30 Inf Thr 93.3 Phanerogamae -NA- Dicot GCCCTTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGtCCGTAGTTCGATCCTGCGTGAGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGATCGATGAGATGAACTTGGATGGCTCCCAATTGTTAAAAGActgtttgaaacaaaaaaatacaagaataaCAATAACATTTCACAAAAGAGACATGAC CTCCTATTTTTTAACCCTTTTAATCAATACGACATCGTTTTATATCTCTTGCACAGTATGTTAAACCTTAGAAACCCCCAAAACTCTCGAGTGCCCTTCT - 45451_PtRNAdb chr-1.trna88-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 88 5761358 5761277 Ser TGA 0 0 82.2 47.60 34.60 Inf Ser 121.0 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTTGAAATCTGTTGGGCTCTGCCCGCGCAGGTTCGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. CAATATCGAAATTAAAAGAGGAGAGAGATCCTTTCACCTTGTATTTTCCTATACATTATAACggttaagtaaaataatttcaagCAGATAGGCAACACTT tccttttttatattttacaaattttgagcCCCAAAAATGGCTTCAAATTTGACGTTTAGGGCTCTAACCCagatatatttttcattcatgcACTTGGGGA - 45452_PtRNAdb chr-1.trna89-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 89 5361491 5361420 Gln TTG 0 0 74.2 54.70 19.50 Inf Gln 105.6 Phanerogamae -NA- Dicot GGTTCCATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTGGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tcttttttttctatttttacttttaggaCCCTTATATAAATTTCTCTAATTAATCATTATCCTTAATAAAACTCTTTACTTTGAGCCGTGTGCCCAACAT cttgtttttcttttttttctgttaaaatataatttgaaatttagttcttatacttttatttttaagaatttagtcccttacatatcaaaattcaaataca - 45453_PtRNAdb chr-1.trna90-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 90 3762539 3762468 Asp GTC 0 0 67.8 44.80 23.00 Inf Asp 92.9 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGCGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TGGAGTAGTGAACGACTTCTTTTTGggtaaataaatacaagaaTTATCCATTTACTAAATACTGATGTAAATGTGTGACAATGATTTAGATAGCAACTTG aTGTTTTTTTGGGTTGTCTAAATTTTAACGACCGACTGAACTTCGAAAAATCCTCCAACTCTTATCCCTCGAAAGTAGAAAAATGGCGTTACCGTCAACT - 45454_PtRNAdb chr-1.trna91-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 91 2748145 2748062 Leu CAA 0 0 81.0 54.60 26.40 Inf Leu 125.6 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.><.<<<...>>>>>.......<<<<<<<<<<<<. TTAATCTGCTTTTAAGTTACAACTGTACATGAAGATGCATATATCTCATTGGAGTTTagcttaaacttttaaaaatttctgaTGACCTACTTAACATCTT tcatgcttttaattttttaagccCATTCTTACAGAAGCCCAAACTGAGACAAGCCAGTAAACAAAAGCCCAAAGTTTGGCCCAAATGTTCCAAAGCAAAG - 45455_PtRNAdb chr-1.trna92-Ser-CGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 92 2543219 2543138 Ser CGA 0 0 78.0 45.60 32.40 Inf Ser 118.6 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTCGAAATCTGTTGGGCATTGCCTGCGCAGGTTCGAATCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. TTCATTAGTAAAAAAACTTCTACTTTTATCAATTGTATCATATGTGTTGAAAAGAAACTAGattgtttaatattaaatttatagaaAACATGAATCAAAC attctttttctttttaagagcCAAGGAGTTTGCGTCCCTGGCATGCTATTGCTGCTCTGCCGTAAGTAACCTTAAATTGCCTTCAAAGGCATGCCCATCA - 45456_PtRNAdb chr-1.trna93-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-1 93 1613737 1613665 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ataataaatttattcaaaatattcaatGAATAATACATTCGAGATTTAGCTAGCTACTTTCATTAGTAACATGTTTTGTCTGTAGACAGATGACCATAAA TGTCATCTTATATTTTGATTCTACTTtaaattttggtcaaatttttttattagaccCTATACTTTGCCCAAATTATGGATTTGGcacctatactttaatt - 45457_PtRNAdb chr-2.trna10-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 10 34465791 34465864 Asn GTT 0 0 70.8 53.70 17.10 Inf Asn 89.8 Phanerogamae -NA- Dicot GCAGGAATAGCTCAGTTGGCtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>.>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. AGATTTGAGTTAATATAGCTACAGAAGAGACTCCACTGTCAAGAGCCAGGTTCAATGAATatgtttttcaatattatttaactttatCAAAAACCTTAAA TTTTTACTTTTGGTTCAATTTCATCTTTGGTCCCTTTAAATCGCTTTCCAGCGTTTGTTTAACTTCATCTTTGGTCCATTTAAATTGCCTTTTGCTTTAA + 45458_PtRNAdb chr-2.trna11-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 11 34488747 34488820 Asn GTT 0 0 79.1 54.00 25.10 Inf Asn 91.6 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTCGGCtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTTAATATAGCTACAAAAGAGACTCGACCGTCCAGAGCCAGGTTCCATGAATATGCTTTccaatattgaaattaattttattgaaaagttCAACAACAAA TTTTTTACTTTTCGTTTAGTTTCATCTTCGGTCCCTTTAAATTGACTTTTGCTTTAAGAAATGATGGTAGTCAGAAGAAGAGCACCAGCTATTGTTATGG + 45459_PtRNAdb chr-2.trna12-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 12 34502279 34502352 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttatctcTCCTAAACTGAATAAATTTCAATGTAAACATcttttaatactaattttatgtttttaatataaatataaataatataattcgCCTATCGTAAA GGTTTgcttttggtttaatttcatttctgGTCCCtttaaattgcattttgcttTAATTTAATTGCTTTCCAGCGTTGACTTGTGTGTGGTCGTTTCTATT + 45460_PtRNAdb chr-2.trna13-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 13 34503336 34503409 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGTTCTCAAGATTTGAGTTAATATAGCTACAAAAGAGACACCACTGTCCAGAGCCAGGTTCCATGAATATGCTTTCTATTGAAAAGCTTAACAACAAAAG TTTTTACTTTTGGTTCAATTTCATCTTTGGTCCCTTTAAATTGCCTTTTGCTTTAATTTCATTGCTCTCTAGCGTTGAATTGTGTATGGTCGTTTTATAT + 45461_PtRNAdb chr-2.trna14-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 14 40945343 40945416 His GTG 0 0 35.1 29.20 5.90 Inf His 44.1 Phanerogamae -NA- Dicot GCAGATGTAGCCAAGTGGAtcAAGGCAATGGATTGTGAATCCACCATGCGCGGGTTCAATTCTCGTCATTCGCC 74 >>.>>>>..>>>...........<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<.<<. aaaaaagaatgatgactgatagaaatagaaatcgttataatttgtatttgaaatatttaaacaagtaaaaaaatattatagagtATAGTAATTGTAGGGG catgtcatttttttaataaatgatttgctacaaaaggaatttttagtgaacgtgccatttttttactttaaaaatatatagtttttgtttttgtaaagac + 45462_PtRNAdb chr-2.trna16-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 16 41043192 41043264 Asn GTT 0 0 53.5 43.30 10.20 Inf Cys 46.4 IPD:-2.10 Phanerogamae -NA- Dicot GTCCTCAgTAGCTCAACGGTAGAGCGATCGGTTGTTAACTGACTGGtCGTAGGTTCAAATCCTACTGAGGAGA 73 .>>>>>>...>>>>.......<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<.. NNNNNNNNNNNNNNNNNGGGGGTTACCAAGGAAACTTCAAGTTCATATTGGTCATGAGTTGAGACTGGGAATTGACCTCTATGAGATCTAATCTCTCTTT TTTGATTCATTCCGAATTAAAGAATTCAGAATGTCAGAATAAAAGGGTTCGCTTTGACCGTTAAGAGCAGCTAGCCCGTTCCCTGTGTCTTTTTTTCTAT + 45463_PtRNAdb chr-2.trna17-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 17 52875722 52875794 Met CAT 0 0 51.6 24.20 27.40 Inf Thr 62.3 IPD:-30.80 Phanerogamae -NA- Dicot ACCTACTTAACTCAGCGGTtAGAGTATTGCTTTCATACGGCGAGAGtCATTGGTTCAAATCCAATAGTAGGTA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CGGTTTGATTGGTATTGCTTAGAAGTAATATTGGATTTATAATCCATCGATGTAATAGgttccttttctttctctttatgATTCCTTATGATAATAAATG GAACTTATTAGATACCATCGATCCCGGTGTCTAATAAGTTTTTCTACCCACcttcttttattgattttctatctttttcatCCTATTCTATTTCCGTTAT + 45464_PtRNAdb chr-2.trna18-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 18 53110219 53110292 Thr AGT 0 0 76.0 48.40 27.60 Inf Thr 90.6 Phanerogamae -NA- Dicot GCTCTCGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACGAGAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCCGCCTCATTTCCAGTTGAAATAAATGGCCGCGATGACTGATGCACACTGATTAGCttgcaataaatatttttagaaatttcaaacaGTTATATGTTAG AGACTTAAAAATTTTCGCTTCTTTTTCAGCAAAAAAAAATGTGTCAAATGCTGAGTCAGCAAGAAAGCCAACAACAGACACTCTACAGATTATCTAGCCC + 45465_PtRNAdb chr-2.trna19-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 19 55729874 55729946 Trp CCA 0 0 41.8 30.40 11.40 Inf Thr 34.7 IPD:-24.20 Phanerogamae -NA- Dicot GCGCTTTTAGtTTCATTCGGTAGAACGTGGGTCTCCAAATCCAATAtCGTAGGTTCAAATCCTACAGAGCATA 73 >.>>>>>..>.>>>........<<<<.>.>>.........<<.<....>>>>>.......<<<<<<<<<<.<. tattatatatgatatatgatagTATAGGTGTGCTCGATGTATTagggttataaaataaaagaatcctCTTTTTTACagtattatttattatgataaaaaa ATTCCATTCTTGTTAGGTCGGAAATTACACCGAACTGAAAAAATTGAACAGCAATTCGAATTTGACCtccttaaattaaattattaaattaaaattatta + 45466_PtRNAdb chr-2.trna1-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 1 545843 545915 Arg TCT 0 0 67.3 50.10 17.20 Inf Arg 95.7 Phanerogamae -NA- Dicot GCGCTCGTGGCCTAATGGAtAAGGCGCCTGACTTCTAATCAGGCGAtTGTGGGTTCGAGTCCCACCGGGCGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACTAGTTGAACTGATATGTCCaattctattaaataaattattaaaaaataaaaatatatagctaatttgaattaatttttatgccAGAGTAACATCATTG tgtaagtttttaattttttttatctagtaTTATTGGGCAGAAGTCTGGGCTCATTGTATTAATGACCAAAGTGAGCCTATTACGGCCCATTGGCTGCAGC + 45467_PtRNAdb chr-2.trna20-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 20 55883123 55883196 Val AAC 0 0 47.3 41.40 5.90 Inf Val 56.6 Phanerogamae -NA- Dicot GGTGTCCTGGTGCAGTTGGTtTACACGTCAGTCTAACACACTGAAGGtCTCCAGTTCGAATCCGGGCGATGCCA 74 >>>>>>...>>>...........<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<.<<<<<<. aattttgcaaaaaaaaaggactaataGCAGGATTTAACCtagtttaattatgttaattataaaTAGCAATGGGCGTAATATTTCATGCAAAACGCCAAAA AAATGGAAGATCTTGATTTACCGTTTTAAACAATCAGGGTGCGTTTGGTTcactgtattggattagaggtgtattggattagagttgtaatagctaatcc + 45468_PtRNAdb chr-2.trna21-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 21 60376436 60376507 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 94.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. atgaaaaattttcgagttaattgagttgatacGTGAAAAGAAGTTCCTAAACCCTTAATTTATTCACGAAAGCCTTATACTTGTTTTCAAGAACAACAAG aatattttttcaatttgaaaacTCGATTTCAGAGAAAGAGCGATGAAGAAGCTGTACTTTCAAATTATGTCTGATTAATACTTTTTGGGTATCGTCTCCA + 45469_PtRNAdb chr-2.trna22-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 22 60547011 60547082 iMet CAT 0 0 55.0 21.60 33.40 Inf iMet 113.8 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAAGATCGAAACTTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CAAGTGAGCATCAAAGTTTTAGTGGATGCATTACGATAGTGAAATTTATGTTGTTAAAGAAAACACCTAAATAAGCTAgtcttgaaatttattttaatag ATTTTGAGCAagtttttcttgattttttaaattattatcaaaatGTGGGTTGGCTTGATTTTTTAAATCAGAGTTGATGGATAATTAACTTGTGacgtat + 45470_PtRNAdb chr-2.trna23-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 23 60547296 60547367 iMet CAT 0 0 31.9 13.60 18.30 Inf iMet 70.5 Phanerogamae -NA- Dicot ATCAGAGTGGCGTAGCGGAAGCATGGTGGGCCCATAACCCATAGGtCCCAAGATTGAAACTTGGCTTTCATA 72 >>.>>>>..>.>>.......<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. tttgaaaacgaaaaaaaagTTATAGATGCGTTACAATAGTGAAATTTGTGTTGTTAAATAAAACACCTAAATAAGTTAgtcttgaaatttattttaacaa ATTTTGAGAAAggttttcttgattttttaaattcttgtcCAAATGTGGGCTGGCTTGATTTTTTAAATCAGAGTTGATGGATAATTAACTTGTgacatat + 45471_PtRNAdb chr-2.trna24-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 24 60695001 60695083 Leu TAA 0 0 43.5 21.40 22.10 Inf Leu 56.5 Phanerogamae -NA- Dicot TTAGGTTTGCCTGAGTGTTtAAGGGGGAAGACTTAAGATCTTCCCCACTAAAGTGCGCGTGGGTTCGAACCCCACAGCCTGAA 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<..>>>....<<<...>>>>>.......<<<<<<<<<<<<. CATATGTCTTAAAAACTTTCCAGATCTTTTGGCTCTGAAAATGCTTTACAATCTCATTCCAAAGCAAAGCATGGCACTCAAGAGTAAAAGGTGAACCGGT atttttggggttttttttttctcaacttttgaataaaatttgttattaatcTTCTATTTTTTGATAGTTGTCGATTTAATCCTCATACTAAATGTGGCTA + 45472_PtRNAdb chr-2.trna26-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 26 60799064 60799136 Arg TCT 0 0 57.3 44.30 13.00 Inf Arg 86.7 Phanerogamae -NA- Dicot GCGCTTGTGGCCTAATGGAtAAGGCGTCTGACTTCTAATCAGACGAtTGTGGGTTCGAGTCCCAACAGGCGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<. ATAAAACTGGAAACATTTAATTCGGAAGTGCCACAAACGACTCTCAAACATGAGAACtgtaatcaaatatataataaaatttaaaacagtaCAATCAAAA CGTGTTATGGTCtgtcttattaaaaattttggtctaATTTCAGATTTAGTTCCTACAGTTTAGCGAAACCTGCAATTAGTCTCAATGGTTTCTTTAGTAA + 45473_PtRNAdb chr-2.trna27-Ser-CGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 27 61351125 61351192 Ser CGA 0 0 33.8 18.10 15.70 Inf His 32.5 IPD:-32.50 Phanerogamae -NA- Dicot GTGGCTGTAGTTCAGTGGAaAGAACTCCATACCTATGGAGGaCATGGGCTCGAATCCCAGCAGCCACT 68 >>>>>>>..>>>>........<<<<...................>>>>.......<<<<.<<<<<<<. CCGATCTATTGAAGCAAATTCAGCCTAAgcgaaaatttttaatgaaaattatcaaaagaATTAAAGATAGTTTTCATGGTAAAGTATATTTTAAGATCTA TTTTATCTTGTTGAATCTGTGGAATTTTAACTTGATTAGTTTTTCTTAACTTGGTAGGGTTTTAgatttgttatttgttatttatatatggAGTTTGTTG + 45474_PtRNAdb chr-2.trna28-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 28 61824873 61824946 Val CAC 0 0 82.4 54.40 28.00 Inf Val 103.7 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCGAACCCGGGCTCAGACA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. taccaaaatatatatttaccctttttaatttaaggttttattttgtttttagatATTCTAAATATAAATGATTCAACGAAGCGATCAATAGTAACAAGTT TTGTCCGATTTCCCTCTTTCTGTAGCAGTTGGATTTTTAGTAAACCAATCTTGTTATggatcaatttaaattttgggcTTGGCATTTTGGTTTTATGGTG + 45475_PtRNAdb chr-2.trna29-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 29 62051005 62051086 Ser AGA 0 0 54.7 26.80 27.90 Inf Ser 80.8 Phanerogamae -NA- Dicot GTGGGCGTGCCAGAATGGTtATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCATGTTTGAATCCTGCCGCTCACG 82 >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<.>>>>...<<<<..>>>.>.......<.<<<<<<<<<<. ACATGGGTcgccatggtacttttacctaatTTCATCCAAGTCtagtcaaaataaattatactaaaagttaaatttaacaaaactcTCTCAATAATTTGGA TTTTTGCGCTACTAGCAATGCCTgcaatgatattttttttagaataatataattttttacccCTAAATTTGGCAATTAGTTCATTTTGGTGTATGTACTT + 45476_PtRNAdb chr-2.trna30-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 30 62319944 62319872 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gcttttaagatatttttataggTTTGTTGACACTAGTAGTCTTGCATGAAATCTCTAAGCcttgttaattaattacttacAGCTTACAACTTTCAGCAAG atgattttatcttttttcttttccatttttgttgATAAATGAGAAGATTTGCAGGTTGCAGCTCAATATTGGCGAAAACCCAGTAAAGAAACCTTTTTGA - 45477_PtRNAdb chr-2.trna31-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 31 62049539 62049468 His GTG 0 0 63.0 33.70 29.30 Inf His 86.8 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AGCTCTTTGCTAACTTAAATATTGAATCTCAAAGCAGTTTGTTGAAAATAATGTAACATCTAAATACTTATAGAATGACTTTGGGACCCTATGTCAACTT CTaaaccttttttctttaatatgttttggttaattttagaTATTAGTTTCTTGACCTTTAACAAGTTGTGGCTGTAGTTTAGTGGTAAGAATTCCACGTT - 45478_PtRNAdb chr-2.trna32-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 32 62049400 62049329 His GTG 0 0 63.0 33.70 29.30 Inf His 86.8 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GTGGAGACCTGGGCTCGAATCCCAGCAGCCACACTaaaccttttttctttaatatgttttggttaattttagaTATTAGTTTCTTGACCTTTAACAAGTT ttaaacttttttttaatttggttaatttttactattagtccttttacttttcaaattttaacaaattgtGGCTGTAGTTTAGTGGTAAGCATTCCAAGTT - 45479_PtRNAdb chr-2.trna34-Ala-CGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 34 60898434 60898362 Ala CGC 0 0 68.3 44.10 24.20 Inf Ala 99.2 Phanerogamae -NA- Dicot GGGGGTGTAGCTCAtATGGTAGAGCGCTCGCTTCGCATGCGAGAGGcACGGGGTTCGATTCCCCGCACCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGTTTTGCCAACTCTAATGTAAAGCACTACATAAGATTTGTGGCAACTTACCCATaatgattatattaaaaaattacgtAGCTTTCAAACCAAACAATGA TGCCTCCACTGTATTTTTAATTAGCATTTCTTCATCTTTGTTGTCTCGCTCCTCCTCCAAACAGAAAACTTTCACCCAAAATTTTGTATACAACAACGCC - 45480_PtRNAdb chr-2.trna35-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 35 60805932 60805860 Arg TCT 0 0 66.8 49.40 17.40 Inf Arg 96.5 Phanerogamae -NA- Dicot GCGCTTGTGGCCTAATGGAtAAGGCGTCTGACTTCTAATCAGACGAtTGTGGGTTCGAGTCCCACCAGGCGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAATCTTTCATTATATGCCTTAGCtttagtttgatttgatttgtaaaaaattaaaacatagtgatattataaaatgttatattgaaACTTGAATTCAAAA tttatttttattctcatcAAAACTTTTTGGTCAAATGTCAGAAGTAGTCCCTAGTGTTTATGTAAATTTGACTTTTTAAGAACAAAAGCGCCTGTGGCCT - 45481_PtRNAdb chr-2.trna36-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 36 60805772 60805700 Arg TCT 0 0 69.9 49.40 20.50 Inf Arg 99.6 Phanerogamae -NA- Dicot GCGCCTGTGGCCTAATGGAtAAGGCGTCTGACTTCTAATCAGACGAtTGTGGGTTCGAGTCCCACCAGGCGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CCCACCAGGcgtgtttatttttattctcatcAAAACTTTTTGGTCAAATGTCAGAAGTAGTCCCTAGTGTTTATGTAAATTTGACTTTTTAAGAACAAAA CTTATTTTCACCTTGAAACTTTTTGGTCAAACATCAGAAATAGCCCTTTCTCATCAAAAAGTTTTGGTCAAATACCAGAAATAGTCCCTAAGTTTAGGGA - 45482_PtRNAdb chr-2.trna37-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 37 60663201 60663121 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. GACTCAATTGCActtaatgaaataatttattttatggtcgttgaatatcatttttcatcatagggtttttattaattttctgaATTGGTTTCGATATGGA ATTATGTAGTTTTTATTCCCCAATGTTGTTccaatttccaatttaatccccttactttagaaaatttgaaaagtttgtttttttatttagttttcagAAT - 45483_PtRNAdb chr-2.trna38-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 38 59646784 59646713 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. taaccgaatgaacacccctaattCATTCTCATGCTCCAAaccattttctattttaattccAGCTTGAAATATGGAATTTATTTCACTTAATCAACAACTA attattttataattttcgtTTTTGGTTGATGTGGTTGTTTGGGCCGAGTGCAAGTACAATGGTTTTCTATTGCTATGTCGTGACATGTGGGCTATGTGTT - 45484_PtRNAdb chr-2.trna39-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 39 58790923 58790841 Leu TAA 0 0 71.0 33.00 38.00 Inf Leu 93.8 Phanerogamae -NA- Dicot GCAGGTTTGCCCGAGAGGTtAAGGGGGAAGACTTAAGATCTTCTGTACATAAGTACGCGTGGGTTCGAACCCCACAGCCTGCA 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. CTTGTTGCTTTCGACTAGATAAAAGACACATCAGATATAATTGgctcattattttttaaagcaaaGACAAATAAAGATTACAGATCCTTTAAGCTCAACA Cgtattttagaaaattcaaaagaaaagggaaagtttaaaaaaattattttttattaaaaattataaaattcaagaaaattaaattttataaaaattcaaa - 45485_PtRNAdb chr-2.trna3-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 3 10658452 10658522 Gly CCC 0 0 66.0 29.20 36.80 Inf Gly 87.4 Phanerogamae -NA- Dicot GCGCATCTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGaCCGGGGTTCGATTCCCCGGATGCGCA 71 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ACAGAACTGCATTCCAATAAAGTTGTAAAGTGGTTGGCGGAATAAAAGAAGAgtaaatatttagtattaatataatatttgagaATCAATTAACAGCGAA AATGTAGAAAGGCTgctaaagaaaattttgcaaatagCTTTTAATATGTAGATATTAAATGGTTTTGAGTTAGTTAAAAATGCATGTATTTAGGTGATTA + 45486_PtRNAdb chr-2.trna40-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 40 56590455 56590383 Lys TTT 0 0 80.2 57.40 22.80 Inf Lys 87.5 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGCTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. AGGCACAGCCTCCCCGTACTCAGAAAAATACCCTCGGacaaaattttatcttgtagatatgtttatagatttaaaatcCAAACAGAAAATTTTCAGGCAA GCTTTTGTAATTTTTCGTCTAAACAAACTTCACTGAAATCCCAACGTCATATGTTATCCATATACTCATTGGATtttcctctcatttttttttatttctt - 45487_PtRNAdb chr-2.trna41-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 41 55829972 55829899 Ile TAT 0 0 85.9 70.60 15.30 Inf Ile 103.9 Phanerogamae -NA- Dicot GGTCCCGTAGCTCAGTTGGTtAGAGCGTTGGTCTTATGAGCCGAAGGtCGCGGGTTCGAGCCCCGCCGGGACCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CtaaaagaaaacgaaaagaAACGGTGAAATGCCCAAGTGTAAATTAAAACGCTAggagtaaaaataattttaaaaaataaaaagaatcctACAACAAGTT TCTATTTTCGTTTTTCaccttctttaattttcttccccttttttccCATCactagtttcaattttttttccttcttttcactattcttttatttttccac - 45488_PtRNAdb chr-2.trna42-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 42 54261004 54260931 Met CAT 0 0 43.0 22.70 20.30 Inf Thr 57.0 IPD:-51.00 Phanerogamae -NA- Dicot GCATCCGTGGCTAAATGGTtAAAGCGCCCAACTCATAATTGGcGAATTCGTAGATTCAATTCCTATTGGATGCA 74 >>>>>>>..>>>..........<<<.>>>>>.......<<<<.<.....>>>>.........<<<<<<<<<<<. ATGTCCTTTCATTGATTCCTTCTAAATTGCACTGATTTATCCTAAAGATTTCATTTCAATTGGAATCTGGTTATTCACCATGTACACGGATCCCCGCTAA CGCTAATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTATATCAATGGAATCTCATCATCTATACATAACGAATTGGTGTGTTATATCCATACAGGT - 45489_PtRNAdb chr-2.trna43-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 43 47856762 47856681 Ser TGA 0 0 78.3 44.40 33.90 Inf Ser 115.8 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTTGAAATCTGTTGGGCTACGCCCGCGCAGGTTCGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AGGTTTGTACTTTGTAGAAAGCATATCAACGACCTGCATATAGAGTTGGACTTTGTTGATAAAcgttaataaaatattttcaggtCCTCCTAACAAAACC TTTTGTacattttgttttggttattttccCGAACGTACGTCTAGCTCATAAAAGAGTCCCCCACTCGCTATAAATGAGGATCGGGCATGGACCCTGCAGT - 45490_PtRNAdb chr-2.trna44-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 44 42041413 42041340 Asp GTC 0 0 35.9 20.90 15.00 Inf Ile 41.3 IPD:-33.90 Phanerogamae -NA- Dicot GGGATTGTTGTTCAATTTGTcAGAGAACCGCCCTGTCAAGGCGGAAGtTGCGGGTTCAAGTCCCGTCAGTCCCG 74 >>>>>>>...>>>.........<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTCCTTTCCATGCTGCTCCTTGTTCTAGCTcatctttattcttttccaaCGGCTTCAAATGAAGTAGGTGAGGAGAAAAGAATTTGAAGGTTGTAGACCA ACCTATGATCCGAGAAAGATATATCAATTCATCTCTCCGGGGAGAGAAAGAGTTGGATCTAATTTCCCAGCCTTCTTTCGTTTCGCATTTCTCATCGGAC - 45491_PtRNAdb chr-2.trna45-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 45 40973052 40972981 Asn GTT 0 0 41.3 30.10 11.20 Inf Asn 39.2 Phanerogamae -NA- Dicot TCCTTAGTCTCTCAACGGTAGAGCGGTCGGCTGTTAACTAATTCAtCGTAGGTTCAAATCCTACTTGAGGAG 72 >>>>>>>...>>>.......<<<..>>.>>.......<<.<<.....>>>>>.......<<<<<<<<<<<<. CTACGAAGAAGTTTCGGGGGTTACGAAGGAAACTTTGAGTTCATATTGGTCATGGGTTGAGAACGAGAATTGAACTCTATGAGATCTAATCTCCCATTGT ATTTGATTCATTCCAAATTAAAGAATTCAGAATGTCAGAATGAAAGGGTTCAGTTTGACCGTTAAGAGCAGGTAACCCGTTCCCTGTGTCTTTGTTTTTA - 45492_PtRNAdb chr-2.trna4-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 4 13179048 13179121 Ile AAT 0 0 79.9 56.50 23.40 Inf Ile 104.5 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAAACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. actgACCGGCTACGTCTCTTATAAACCATTGCCTAATTTGAATGACTGACGTCCATATTTGATTATTGAAGTAGTAAATTAATGAAGCACAAGGTCAACT TTGTTTTTAAGATTTCTTGAGATTTTGTGAGCGTGTGTGCTAGTTTTGGACTTGATGTCCTTAGTTACTGGCCTTGGCCCAATCTCTCggcattaaaaat + 45493_PtRNAdb chr-2.trna50-Val-GAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 50 31746778 31746707 Val GAC 0 0 48.9 18.60 30.30 Inf Cys 49.7 IPD:-16.40 Phanerogamae -NA- Dicot AGGGGTATAACTCAGTGGTAGAGTGTCACCTTGACGTGGTGAAAGtCATAAGTTCGAGCCTAATTATCCCTA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<. AGGAAAGCCTGGCTCCAAGTTGTTCAAGAATAGTGGTGTTGTTGAGTTTCTCGATCCTTTGACTTATGATCCGACAGTTCTATTTCTTGATGGGTAAGGA AACCCAATGtgagtttttctattttgcCTTGCCCCCACTATGATcgaattaaacaatgaaaaaataataaaaaatctcaaatgtatgtttgtttaattga - 45494_PtRNAdb chr-2.trna51-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 51 31620373 31620300 Leu CAA 0 0 58.8 31.80 27.00 Inf Thr 61.4 IPD:-26.30 Phanerogamae -NA- Dicot GCATCCATGGCTGAATGGTtAAAGCGGCCAACTCAAAATTGGCGAATTTGTAGGTTCAATTCCTACTGGATGCA 74 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<......>>>>>.......<<<<<<<<<<<<. ATATCCTTTCATTGATTCCTCTTAAATTGCATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTATGAGGATCCCTGCTAA CGCCAATGAGACCCTCCAATAAATCTATTGGAATTGGCTCTGTATCAATGGAATCTCATCATCTATACATAACAAATTGGTGTGGTATATTCATATCATA - 45495_PtRNAdb chr-2.trna52-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 52 28700398 28700311 Asn GTT 0 0 44.9 38.10 6.80 Inf Ser 62.6 IPD:-64.20 Phanerogamae -NA- Dicot GGAGAGATGGCTGAGTGGActAAAGCGTCGGATTGTTAATCCATTGTGCGAGTTATTCGTACCAAGGGTTCGAATCCCTCTCTTTCCG 88 >>>>>>>..>>>...........<<<...>>>.......<<<...>>>>>>>...<<<<<<<..>>>>.......<<<<.<<<<<<<. ataatctatatAACATAATCTATATAACAAAGTCAAAAAGGGCTTTTTTCAAGCCTTTCTTTTTGCGTGCTGTAACATAGTAATTATCTTTTCTCAATTA TTTCGGTTTTTGGTAGTGGAATAGATCAAATCCTAATACCATTTCTAAAAATGAAGCAAGGAACTctcccttttttattaaatcatttattattttgaaa - 45496_PtRNAdb chr-2.trna53-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 53 25369800 25369719 Ser GCT 0 0 80.5 45.20 35.30 Inf Ser 109.5 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. TGATTTGTTTGGCAGGGGAAACTCTTGCAAGTAAATAAAGAActaattatactaaaatttaattatatctaagCTTGGATGTACATCATAAATAGTCATA tttctttttaattttccgGTCGGAtaacatcaatttcattaaCCACCTTCCAAACTAGAATTTTAAGGCCATAAGGTACTGCTACTTTAATGAAACGATA - 45497_PtRNAdb chr-2.trna55-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 55 23021710 23021638 Ala AGC 0 0 51.4 30.90 20.50 Inf Ala 84.6 Phanerogamae -NA- Dicot GGGGTTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGGTACCCCGCATCTCCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. AACTAAAAGCATGATACAGTATAAATGAAATTCCAAGAAAGCAATTTCCAAAGATAAGAGAACAAATTACATAAACTATACTGAGCTTCTTTGCATGGGA tttttttaatattttttataatcagATCCAGAGGTTTCTGGGTTCAGAGATATTCAGCCCATAAGGATCCAAAACCCATCCCTTCAATCAATCGTCGTTT - 45498_PtRNAdb chr-2.trna56-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 56 19547461 19547389 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GATGGTTAGACTAACAAAAAAAATGCTTTAAAAACCGAAGTATAAATGTCAAATTTCAGATTACATCCATAATGGTATATGTAAAAAATTCTAACGTAAA TTCTTGATATGTTTTTCATTTGGAATGGAAACAAAAGTTTCTCCCGCCGTCCCGCGTTTCCCTTTCCcatatttttattcttgaaaCAAAAGTGTCTCCG - 45499_PtRNAdb chr-2.trna57-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 57 11087430 11087359 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttcgaAGTTCTGATTTTTCCTtccctttctttgtttttttgttgtgAAATAAGAACTAATTAAtcttgaaaaactaaaaatgtaaattatgaATCAACAA TTAGTTTTCGCTATTTTTGTGATTACACTGGGCATTTTCATTAAGTAGGGAATAAACTTTTCACTATGTTTTTATGTATTATCGAAAGAATTAAGAAAGT - 45500_PtRNAdb chr-2.trna58-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 58 9186396 9186315 Ser AGA 0 0 78.7 42.50 36.20 Inf Ser 114.6 Phanerogamae -NA- Dicot GTGGACGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGTCCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. tgatctaattaaagtacaaggactaatagcagaatttaaccaaaatataacaCTGTAAAAATGATTAAGAGAAACATTCTACTCCAAGCACATCAAACTC TTTTAACTTTCTTACTTTTTGGTGGCaatttccttcaattttcttttccttcaaaattttcctagaaaataaacacaaattttctCAACCATGAAGAATT - 45501_PtRNAdb chr-2.trna59-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 59 9029861 9029789 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GGGTGTATTGGCGTTTGCTAATTCagtaaaataactttatttaagaaaggttggttgcttttgtattgaaataagttattcatatgaaaataatcAACTC taaattttaaattttcctttcCTATATGCAGAAGCCCAAGCCCAAACCATAACCATGTTTCGCTTCGTTTATTATTTGGGGGAGGGGTGGACtaataaga - 45502_PtRNAdb chr-2.trna5-Arg-CCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 5 14470354 14470426 Arg CCG 0 0 64.0 47.00 17.00 Inf Arg 89.5 Phanerogamae -NA- Dicot GATTGCGTGGCCTAATGGAtAAGGCGCTCGCCTCCGGAGCGGGAGAtTGTGGGTTCGAGTCCCATCGCGATCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCAAGATTTATTATTCAGCTATATCAGGATACGAATTGCCAACTTCATAAAGGAATAAGACAATGTTTAAATACGTTTTATTTAATTGCTAAACCAAAGG tttttgcatttattttacaaatttgaaattcagtccctcaattattattattattattattattattattattgtgaaTATACCtgttaaaacaagaaaa + 45503_PtRNAdb chr-2.trna60-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 60 7290071 7289988 Leu CAA 0 0 77.8 51.60 26.20 Inf Leu 121.9 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.><.<<<...>>>>>.......<<<<<<<<<<<<. CAATTTTTAATTAGGttatattctaatttttgttttttaatgtgATTAGCAGCTCCTTATACTGtgatattaaaaacaaaatgagaaaattaacGCAAAT TTTTACTACATTTAACCTTCAAAATATAGTGTCCAagttaaaatttagtctttatgtTTAAAagctatttattattttagtttataggTTTATGATTtgt - 45504_PtRNAdb chr-2.trna61-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 61 4746582 4746509 Met CAT 0 0 56.5 34.60 21.90 Inf Thr 61.4 IPD:-38.50 Phanerogamae -NA- Dicot GCATCCATGGTTGAATGGTtAAAGCGCCCAACTCATAATTGGcGAATTCGTAGGTTCAATTCCTACTGGATGCA 74 >>>>>>>..>>>..........<<<.>>>>>.......<<<<.<.....>>>>>.......<<<<<<<<<<<<. ATGTCCTTTCATTGATTCCTCCTAAATTGCATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTACGAGGATCCCCGCTAA CGCCAATGGGACCTCCAATAAGTCTATTGGAATTGGCTCTGTATCAATGGAATCTCATCATCTATACATAATGAATTGGTGTGGTATATTCATATCATAA - 45505_PtRNAdb chr-2.trna62-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 62 2249488 2249417 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTCTACCAATCAAATCTCTGTGTTGAACAGCAAGAACTAGTGTCTTTCCTTTACTTCTTTTGCAGCCAAATTTTATTATAGCTAAATTTCTTAATAACAA tTATTTTTACTGATGTCTATTAAGCaataaattgagagaaattttatagaaagaaaattgaaataatttgggTAAATCTTAGAGAAGTTCATCCTAGTAA - 45506_PtRNAdb chr-2.trna63-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 63 2248466 2248395 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ATCAAATCTCTTTGTTGAACAGCAAGAACTAGAGTCTATCCTTTAGTTCTTTTAAGGCCGAATTTTATTATAAGCAAGTTTCTTAATAATTATCCAATAA ttttttttttttactcaatagtttgagagaaaatttatataaaaaaatttgaaatattttgggTAAATCTTAGAGAATTTCATCCTAGTAATGAAAAATT - 45507_PtRNAdb chr-2.trna64-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 64 1528835 1528763 Val TAC 0 0 78.2 43.80 34.40 Inf Val 106.2 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTTAGTCTTACACACTAAAGGtCCCCAGTTCGATCCTGGGCAGCAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGCTCAAATACCAAATCGTATATTAACCCTTTTCATTCTTTATGACTTCTTAAACAGAGTTGaaagattgatttttaattacaGCAGTCTCATGAATAA gttattatatttttcttttcttttcttttctttctttcttcttcttcttcttcttctactttttttttttttttttgtatttgaaagAATTATAACTTTC - 45508_PtRNAdb chr-2.trna65-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 65 1528123 1528051 Val TAC 0 0 78.2 43.80 34.40 Inf Val 106.2 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTTAGTCTTACACACTAAAGGtCCCCAGTTCGATCCTGGGCAGCAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ataccaaataatatattaaccgTCTTTCATTTATTATCACGTGACTTCTTAAATAAATCTGAAGATAGTTagaattaaattccaaatttagaaTCAACAG taaataaaattttcagttcagtattcaatattttcaataaattctTTATGTTTTGTTCCCAATTCGACCGACcggaaataacattaaccgacctttcaat - 45509_PtRNAdb chr-2.trna66-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 66 1387072 1386999 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTGGAGGCAGTATTATTAAGAGAGGTGATTATGAATCTGGAACATGAATGgtaacaaatttgattaaataaataatgtaatgGGAAATACGTTAAGCAAG tttttgccttttttttttttgtgtaaaacCTGATCGATTAAAAGCCCAGATTTAACTCACAATGTTTTAGGCCCAATTTGTTAAAATTCTTATAGAACTT - 45510_PtRNAdb chr-2.trna67-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 67 211095 211012 Leu CAA 0 0 81.0 54.60 26.40 Inf Leu 125.6 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.><.<<<...>>>>>.......<<<<<<<<<<<<. TAGAAGGACTTGGCTTCCATTCAACAATAGCAAAGTGTGAGTGGAGAAAACAAGCTAAAACATTcaactataaaatatttattttagaaacgAACAAATA ttttatttaagcattttacttaaaacggcgtcgttcaggTTGCCTCCGAGAACAAACACGTAACATTATGGGAAATATCCATCCAGAAACAAAGAGAGAA - 45511_PtRNAdb chr-2.trna7-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 7 26981959 26982032 His GTG 0 0 41.5 29.10 12.40 Inf His 50.0 Phanerogamae -NA- Dicot GCGAATGTAGCAGAGTGGAtcAAGGCAGTGGATTGTGAATCCACCATgCGCGGGTTCAATTCTCGTCGTTCGCC 74 >>>>>>>..>>.............<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. agataaaaaaaagaatgatgaCTGATAAAAATCGTTGCAATttgtatttgaaatatttaaacaagtaaaaaaatactaTAGCGTATAGTAATTGTAGGGG catgtcatttttttaataaatgatttgctacaaaaggatttttttaGTGAACACgccatttttttactttaaaaatatatattttttgtttttgtaaaga + 45512_PtRNAdb chr-2.trna9-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-2 9 33998152 33998224 Lys TTT 0 0 88.7 64.40 24.30 Inf Lys 93.7 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gaTAATGTACAAACTTCAAAATTATTCCAACTACTATCCGCTTTAgttaattaatctattttaaaaaacaaatattactTATTGGAAAATAAACATCCAG TTTACTTTTTTGTTATTCCACTGTTCATTTTCGGCTGGTTATTTGGGCTTACATTATTTTTGTTCTCAAAAACGGGAAAAGAATGTCTTTACGTCCAACC + 45513_PtRNAdb chr-3.trna10-His-ATG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 10 15705931 15706004 His ATG 0 0 46.8 37.90 8.90 Inf Ile 58.9 IPD:-6.60 Phanerogamae -NA- Dicot GGGCCTGTAGCTTAGAGGAttAGAGCACGTAGCTATGAACCACGGTGtCGGGGGTTCGAATCCCTCCTCGCCCA 74 >>>>..>..>>>>.........<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<..<<<<. GAAAGGCACTTTCACATATTCTTAACCCGAAATGGCTGGGGAGAGgaaatgtttctttttttaaggtACTCCTAGGAACAGATCTAGTGGACACGAGATG CAACTGGCCCAAAAGGGAAGGATCTTTCCTTTTGGGGGTAGGAAAATCATGATCGGGATAGCAGACCCAAAGCTATGGAACTTGGGCATGGGTCTTTTAC + 45514_PtRNAdb chr-3.trna11-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 11 17726768 17726849 Ser TGA 0 0 82.2 47.20 35.00 Inf Ser 113.1 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGGCAGACTTGAAATCTGTTGGGCATTGCCCGCGCAGGTTCGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. tttaaattttgtcgAACTACACTAATGGCACGTGAAAGTCGGACtaatttcagtaattttatatattcaagTATAATATAAATCCACAGCGAAGTATATA ctttttatttttatattttcttcttaGACTTCCATTCATGGGCCTTAATACCTTTGACCCCAACATAAGTCAAATTCATGTTatgttttactaaatttat + 45515_PtRNAdb chr-3.trna12-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 12 20330482 20330553 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAATCACCAGCAATTGTAGGGTCTATTTGTAATTTCAGCTTTGTATCTCtatatatactattaaatgttttatatttgttaaGCAGCTTGCCTAACAACA AAGATTAGCCGGCATTTTTTTGTCTTGTCTTTTTCCCGTCACAAGCTGAATTTTGCAGAAGTTATGTTTCAAAATCAGAAGAGAACTTTTTGTTTAGCCT + 45516_PtRNAdb chr-3.trna14-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 14 30000051 30000131 Leu AAG 0 0 55.9 46.40 9.50 Inf Leu 81.3 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTTTGGTccgaaaGGgTGTCGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>.>>.......<<.<<<<<<<<<. CACTCTAATTGGACCACTAATTTGTGTTTAAGGCCAGGAAAGGGAGGTGAAAAATTTACTCTTATTCACTAACTAAAGTTACACGTATGGGTTAAGCAAT ATCAGTTTTAGATTTATTCTTTCCATCCCTCTGATCTAATtctattcaataaatttttctcTGCTCTTATAATCCTCCGTTTACGTCAGGAGTCCATTGA + 45517_PtRNAdb chr-3.trna15-Leu-CAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 15 30090166 30090246 Leu CAG 0 0 59.8 37.20 22.60 Inf Leu 97.9 Phanerogamae -NA- Dicot GTCAAGATGGCCGAGTTTGTctAAGGCGCCAGTTTCAGGTACTGGTccgaaaGGtCATGGGTTCGAATCCCATTCTTGACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. TGAGATGGCAAGATCTTAGTCGTTGACGTTTgttggataaatttaattgatttaacatCATTGATTACATACTTTAACATGAAGGCCTTCGATCAAAGAT agaatttttataatttttctttccatttatttttgaaGCCCTTGtttcacttattttttttcttttaagcccttatttcaatttttttatttttgaagcc + 45518_PtRNAdb chr-3.trna16-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 16 34491809 34491880 Asp GTC 0 0 39.4 31.20 8.20 Inf Asp 61.0 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTAGTgAGTATTCCTGCCTGTCACGCGGGTGaCCCGGGTTCGTTTCCCGTTAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>.......<<<<.<<<<<<<. gtgttgccagtccccggcaacggcgccaaaactgaggggtgtcgaatccaccaatataaacctacgcctaatTTACGATTTAAGCAGTATAAGGAGTAGG CCGAaatgatgggtgtcgaatccaccaatataaacctacgcctaatTTGCGATTTAAGCAGTATaaggagtagggtcgatccctcagagactgggtttac + 45519_PtRNAdb chr-3.trna17-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 17 36677436 36677508 Arg TCT 0 0 70.3 50.10 20.20 Inf Arg 92.3 Phanerogamae -NA- Dicot GCACCCATGGCCTAATGGAtAAGGCGCCTGACTTCTAATCAGGCGAtTGTGGGTTCGAGTCCCACTGGGTGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGTCTCTATATCCTCTTTGGGTAGAATCTGGAATGCAtcgaattcatcaaattaatcccACATGGTTAAATTGGAGCATTGAAGTTTCAGTGACAAGAA cagttaatataaaatattatagtttttttataaaaatcgtaaaatcattaaaaagggTCATTACCTGCATTCCTCCCTTCTCAAGAGCTGCACAATTAGC + 45520_PtRNAdb chr-3.trna18-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 18 37304234 37304305 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gtaaaataactcTTAGTGCTGAACTTAATTGAGGCGGATAGGCAATACAAGCATTAGtgtttttaagagaaatttaacaTCTAAAGCCTTACGTCAACAA GTTTTAATTGTTTTGGGTTTAAGACGGAAAAAAACAGACCTGGGGATCATTCTCTAGACGTTGAAACTCGAGGTATTCAGGGATACCGGAATCAGCGGCG + 45521_PtRNAdb chr-3.trna19-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 19 37872393 37872464 Asp GTC 0 0 67.8 44.80 23.00 Inf Asp 92.9 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGCGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CATATAGCTAGTTTTACTTTTCTTCTCTGAAACCAGCTTTATAATGTTCaaactattttattaatataaataaataaactttaagGCTTGTATCAACCTT gTTCATGGTTTTTTACCTCACTTAGATGGCACTTGATTTTGGTAAAACTACCATGGAGAGCCTatactaaaaattgaaaattaattctttagatcaaaaa + 45522_PtRNAdb chr-3.trna1-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 1 1117307 1117379 Met CAT 0 0 25.3 10.70 14.60 Inf Thr 28.2 IPD:-20.80 Phanerogamae -NA- Dicot ACATACTTAACTCAGCGGTtAGAGTATTGCTTTCATACGACGGGAGtCATTGATTCAAATCCAATAGTAGGTA 73 >>.>>>>..>>>>........<<<<.>>>.>.......<.<<<.....>>>>.........<<<<<<<<.<<. CGGTTTGATTGGTATTGCTTAGAAGTAATATTGGATTTATAATCCATCGATGTAATAGgtcccttttctttctctttatgATTCCTTATGGTAATAAATG GAACTTATTAGGATTTCGTTAAGGATAATCTAgaagcataaaataaaattttaaaaggagattaaattaattaattttaatattatagtaacaaatcaGT + 45523_PtRNAdb chr-3.trna20-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 20 38324795 38324874 Leu TAG 0 0 69.5 48.50 21.00 Inf Leu 111.5 Phanerogamae -NA- Dicot GACAGTTTGGCCGAGTGGTctAAGGCGCCAGATTTAGGCTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACAGCTGTCA 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. CTTGAAAATTCTAAACGTTGCCCATTTTATAACCAAATTTACTATATTCTCCAAGGCAGAAGACATAGTTTTTTATTAATCTCAACTTCCACAACATCTC tgtctttttattttaaattaagttttgaaaatatttagatCTAAAAGTTGTATTCTCTTTTTCAAACTTAGAAGAATTTATTGTTCTATTTAAAATAACg + 45524_PtRNAdb chr-3.trna21-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 21 39308217 39308288 Arg TCT 0 0 54.4 31.00 23.40 Inf Gln 61.3 IPD:-23.20 Phanerogamae -NA- Dicot GCATCCATGGTCTAATGGAtAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATCCTATTGGACACA 72 >..>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<..<. GTGCCAAAATTTCACATGTTCTTTAGTTTTTCCAaccaagagaaaagaaaaaattgaacaagagaaaaaaagtcaaaatgtcaaaatatcaTAATGAAAA ATTAGAATCAATTTCTCTATATTCCATTAAGTtagaattttcaatttataatttttcctgAAGTCGAAAATGTTCCATTTGTTCTTGAATAGCGTCATTC + 45525_PtRNAdb chr-3.trna22-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 22 39335041 39335114 Val AAC 0 0 63.9 46.70 17.20 Inf Val 91.1 Phanerogamae -NA- Dicot GGTGCCGTGGTGTAGTTGGTtATCACGTCAGTTTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>.>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. aaattaataaagaaaagcAGCGGAGCTTGAGTCGGTAACTCAACGTGGTAGGGTTATATTTATTCctttataaaaagttatttaagGAAACTATCAATAC cttttcttttctatttttcatttcccATTTGGCGTTGTATTTACTGacccaaaagaaaaaacattatacatatatatatattttaatatttatgatttta + 45526_PtRNAdb chr-3.trna23-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 23 39340053 39340126 Val AAC 0 0 71.9 47.60 24.30 Inf Val 91.0 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCAAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tttattaatcaaaagaGACCCAGTGAAAATTAACAAAGAAATGCAGTGGAGCTTAACTTTTTAATCAATTGATAAATCTATTTAAGAAAAGTGTCAGTAC gtctagttttttttctttttaatttcctttttcgCTTTGTATTTCTTACACCGACGCATCCAAATTTCCAAAGTAAAGCATTACATAAGCGtttaattat + 45527_PtRNAdb chr-3.trna24-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 24 39500935 39501026 Tyr GTA 39500972 39500990 72.0 38.70 33.30 Inf Tyr 110.0 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCACTGGTTCGAATCCGGTAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>..........................<<<<<.....>>>>>.......<<<<<<<<<<<<. ATCTACAGAGAAACCCGAGTTGAAAGAATGATATGCTGTAATCTCTTACGCGGTAAATCTGAACAGTGATATAAATTAATGTCGACGAGTTTTAGCAAGA ACCTTTCGAATTCTGTTTTTTTTCCGAAGATTGGGCCAGATGAGGCCCATACTTTAGTGTTGCTAAATTAGTTAGtgtcttttttcttcatttcttggCG + 45528_PtRNAdb chr-3.trna25-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 25 41719122 41719192 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTGGTATAGTTTTGAGTTCTGCACATTCTGGATTCGTATAATTTTGAGAGTCAATGTTAAATTAATCTAGTAATAGCTAATCAAAAATCTTTAGCAAGCA TCCTTTTATTGTTTCCTTTTAAATCCAATGTTTACTGCATTTATTTGACGAATCCTTTTTATTCAGAGGGCCTGTCTTTCTGGTTCCGGATCTCTCTGTA + 45529_PtRNAdb chr-3.trna26-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 26 41950169 41950242 Arg ACG 0 0 52.5 38.90 13.60 Inf Ile 67.9 IPD:-19.00 Phanerogamae -NA- Dicot GGGCCTGTAGCTCAGAGGAttAGAGCATGTAGCTACGAACCACAGTGtCGAGGGTTCGAATCCCTCCTCGCCCA 74 >>>>..>..>>>>.........<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<..<<<<. AAAGACACTTTCACATATTCTTAACCTGAAATGGCTGGGGAGAGGAAAGGTTCCTTTTTTTTAGGGTACTCCTGGGAATAGATCCAGTGGAGACAATGTG CAACCGACCCAAAAGGGAAGGACCTTTCCCTCTGAGGGTAGGAAAATCATGATCAAGATAGCGAACCCAACCGTCTCCaattttaaatgcttttaaACTT + 45530_PtRNAdb chr-3.trna27-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 27 42711763 42711834 Thr TGT 0 0 84.5 58.50 26.00 Inf Thr 95.0 Phanerogamae -NA- Dicot GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGtCCGTAGTTCGATCCTGCGTGGGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. caattggaTAATAAAAAGCCCTAGGTACCAACTTGAACCTTGAATGTTGGGTTCTGATATCTGGAATTTTAACTGGTTATGTTGTCCCAAGGTCAACGAA AAATGGAAActcaagttttcttttttagatatggaaatatttgcaaaagaaattaaattaataaacaagtcAGTATCTTAACTATGattttagataatta + 45531_PtRNAdb chr-3.trna28-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 28 42809319 42809392 Val CAC 0 0 82.4 54.40 28.00 Inf Val 103.7 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCGAACCCGGGCTCAGACA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttgagggttaaaattATCATCATGccatttaattattgttaatgttGATAGCTTTTCGCGTCATACtataaataagtaaaacaaaCGACTCATCATCAGT tttttttaattttcctcgGCTTGGCTTATCTATCTCAACTTTTTTAAAGTGCTGTTTAAATATGAgagaaaattattcttttttctttttgaaacagAGG + 45532_PtRNAdb chr-3.trna29-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 29 42813324 42813397 Val CAC 0 0 82.4 54.40 28.00 Inf Val 103.7 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCGAACCCGGGCTCAGACA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ataatagcTAAATTGACCGAAAGCGTATAcatgagggctaaatttatcaatatCCCTGCATTAATAGCTTTTCATGTAATACTGATGGCTTAATAACAAC attctttttattttcttaaataactAATGAACCTTTTCCTCTTTGGCCTAAATTTTCTTAcaaactcgaaattttttttaagggtaaactagtaaaatag + 45533_PtRNAdb chr-3.trna2-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 2 2353673 2353746 Arg CCT 2353707 2353711 25.5 15.60 9.90 Inf Ala 27.8 IPD:-21.10 Phanerogamae -NA- Dicot GGataTAGTTGAATGGTAAAATTTCTCTTTCCTTAGGAGAAGaCGCGGGTTCAATTACCGTGTTCACCA 69 >>.....>>>.........<<<.>>>>>............<<<<<....>>>>.........<<<<.....<<. TTAGTAgtgaaatttgataaaattgccCTGAATTGAAGAAAGTATCTATCCTAGCTCtgatcaaatattattttctatcaaGAATCGAGATTGAAAACGC tgtatctttttctcaatCTCATAAAATTAGAATGAAACCAATACACAAATGGTTATGTGTAATATAAGTAATAACCTCCATTAATCATGTACTAgttcat + 45534_PtRNAdb chr-3.trna30-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 30 42814538 42814609 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aaaaatactaaataaggggaaaaagcagaataaattattaagagATTAGGTTGTTGtacttttatatactttttaataaattagtaaacTCATCAACGAA tTTTTTTTGCAATTTCCTTTACTTTCAGTTTTCACCATCATACTTCAGTGGTTAAATTCTGCTAGTACTCTCTGTACTTCACGAACATTGTGGATTTAAT + 45535_PtRNAdb chr-3.trna31-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 31 42821735 42821806 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ccataaaataattttatcttccaTCATTCCGGTCATTATGTTCAATACTAAATGGTGGAAAAAGAACAGAAGAAGATAAATTAGAGACTTTAACATTGCA tATTTTGCAATTTCCTATATTTTCAGTTTTCACATCATAAGTGGTTAAATTCTGCTAGTACTCCCTGTACTTCACGAAAATTGTGGATTTAATCACTACA + 45536_PtRNAdb chr-3.trna32-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 32 42822250 42822323 Val CAC 0 0 82.4 54.40 28.00 Inf Val 103.7 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCGAACCCGGGCTCAGACA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACAGAAAGTATAAcgtgagggctaaatttatcaatatCCATACATTAATAGCTTTTTGTGTTATActataacattttaaaactaattcCTTGTCATCAAC attcaaataaaaattttaaaacctttcTCTTCGGCCTGAATTTTCTTacgaactttttttttttaaattttttaaatacggCTTATCTATCTGAATTTCT + 45537_PtRNAdb chr-3.trna33-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 33 43237587 43237658 His GTG 0 0 53.6 26.10 27.50 Inf His 72.1 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATACCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>.........<<<<<<<<<<<. AGGAAATAGAAAGACCAAATTGGAAGTTGAACTATAAGCCAGGTTCAACATCCCAAAAAACACTAAATAATTAACTTGATATTATCCCGTTCTCAAACAT TTTGTTGAACCATTTTTGGAATGGACTGAAAAAATCAAGGAAAGGAAGTTCATCTCGTAGTTGGTTTTGCTATAATCTTAtgaagttttcaatttttaaa + 45538_PtRNAdb chr-3.trna34-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 34 43239488 43239559 His GTG 0 0 63.0 33.70 29.30 Inf His 86.8 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aagaataatggtcaaattggctaaatttatcattttgcctttttctttcaAAGAACTTTGATTGATATTACTTATGACCCAATAACAAAGTATCAATCAT ACTGTTTACTTTTTTCAGTGCATCTATGATTTACTTATGTAATTAGCCTTTATACCAACATTGCTCTTTCATTGAATTTATAATAACATTGCGggtatga + 45539_PtRNAdb chr-3.trna35-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 35 44025336 44025406 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AACATGAGTTCGAACTTGTTTAAGCATGTGATTTCCTCCGATTTCAAGGTTTTAAAGAAACTAACTAAATAAATAGTATACATGTACTGCTAACAAAGAG AGCCAATTCTTTTTCCATCTCCTGTAGTGATAAAACCTGAGTGGGTAAACCCCAACAAGTGAAAGACAAGGGAGCTATGGCTGATGGGACAACATGCTGT + 45540_PtRNAdb chr-3.trna36-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 36 44031709 44031792 Leu CAA 0 0 79.5 54.50 25.00 Inf Leu 126.8 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAagaGGgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>><<<...<...>>>>>.......<<<<<<<<<<<<. AAACCTCTgacattttcaagaaaaatagttaaataattggCTCCGATTAAGAGATAACATAGCTAGGTATCAAAAGAACTATAACAACGTTACATCAATT atttttaattaacttattacATTGGGCTAAAATTCCATGTTTTTCGTGGCCCacttttagataaataatttatgaaCACAACGGCCAGCCCAAAAATCCG + 45541_PtRNAdb chr-3.trna37-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 37 44193145 44193227 Leu TAA 0 0 51.3 26.60 24.70 Inf Leu 62.2 Phanerogamae -NA- Dicot GCTGGTTTGCTTGAGTGGTtAAGGGGATAGACTTAAGATTTGTTGCACATAAGTGCGCGTGAGTTTGAACCTCATAGCCAGCA 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. ttataaacaaaataataataagtgcAATATTAATGAATTACAAttatcataataaataaaatagaaataaaagatTAGAGTGTATTTTGCATAAACATTA TTGtagaaggatttttttttatgtgcaAGATTAAATTTGTAGGAACTAAATTTGTTGTAAATAATACTAATTCATTGTGCAAAAATTGGGTGCATAGGTG + 45542_PtRNAdb chr-3.trna38-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 38 45148331 45148404 Tyr GTA 0 0 47.0 42.00 5.00 Inf Arg 49.5 IPD:-53.40 Phanerogamae -NA- Dicot GGGATTGTAGTTCAATTGGTcAGAGCATCGCCCTGTAAAGGCaGAAGcTGCGGGTTCGAGCCCCGTAAGTCTCG 74 >>>>>>...>>>>.........<<<<.>>>>>.......<<<.<<....>>>>>.......<<<<<.<<<<<<. CTATTAAATGATAACTTTGGCTTactctaaaatctaaataaaaaatagcttGAATGAAATTATAAGACTATCTATGTTGTacacttttctttatttccct acggataaaatttttaaaatacatcaattgATCCCTCCGTTTTCTGTCAAAGGGGATACAAATGACAGAATTTCATTCCCAACGatatctttatcttttt + 45543_PtRNAdb chr-3.trna39-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 39 45229854 45229925 Cys GCA 0 0 82.1 59.90 22.20 Inf Cys 106.6 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTTGGCCCCTAGCTATCACCAAATAACACTTGATTTTGTGGTTCATGAAACTTCACTTTGAGAAAGTCGTAGATTTTGTTTAAAGCTCCAATAAACAAAA tttttttatggttttccttttttgtgtttttcaaaCTTCATATGTACAAATGGTTGATGCTTGATAATAGATGCCATTTACGTGTTATTGCAGACATAGA + 45544_PtRNAdb chr-3.trna3-Cys-ACA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 3 4780936 4781006 Cys ACA 0 0 44.0 28.20 15.80 Inf Cys 48.0 Phanerogamae -NA- Dicot GGCACATGGCCGAGCGGTAAGGTGGGGGACTACAAATCCCTTATTCCCCAGTTCAAATCCGGGTGTCGCCC 71 >>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<.<<<. TTGTGTGTCTTGAGATACTATAACCAATTGAAGGTATGGATCtgatctaaaaatgaaaaagaaaagggagatACTCTCCTTTTTTTGTTTGTAGCCTTCT GAtcaaaaaaaaactcgaaatCCTAACGTCTCCTAACGTCTAGGATtcaaggaaaaactaaagtagTGGAAGGGAATCAGTAAATCTTGATATGGGAGCC + 45545_PtRNAdb chr-3.trna40-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 40 45631900 45631971 Gln TTG 0 0 66.5 53.80 12.70 Inf Gln 98.3 Phanerogamae -NA- Dicot GGTTCCATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTAGGACCT 72 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<.<<<<<. caaaattgatagagGCTAAAATTGGTTCAATCTTTGTAGAAAGTAAAATgattcattttgttttatttgaaaaaaattttagaaaacgAGTCAGTAAGTT tcaatttttttcctataaTATTGTAATTACTTTACATACGGACACATTATATTACAATTACAATGAAACTTTACATAGTTAATGGATTGACTGATGAATT + 45546_PtRNAdb chr-3.trna41-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 41 45353064 45352975 Met CAT 45353026 45353011 64.1 40.60 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>.........................<<<<.....>>>>>.......<<<<<<<<<<<<. CAATACCTTTTGATAATAAGACAAATTAAAGGGAAtgggtttatttttttgaaaacttaacTTGGGGTTAAAAAAGTTAAGAGGTAATTGAGCATCAAAC atatcttcttttttttatttaggtttatTCTCTCACCCcaatcttcttttatttatgtttatttattttttgaaccgGACTAGACCATATGAATTGACTC - 45547_PtRNAdb chr-3.trna42-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 42 39236193 39236121 His GTG 0 0 47.9 23.40 24.50 Inf His 61.1 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAAGTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGtAATCCCAGCAGCCACA 73 >>>>>>>...>>>........<<<..>>>>>.......<<<<<....>>>>>........<<<<<<<<<<<<. TGGAAAGCATGATTAGAATCCCCTTTTGACGTTAGTCAATGTTTGAGTTCTgcgtttaaaaaatatttataacctATTTCTAGATTTTGCATGCCACAAA AACATgttaaatactttttttctcTGGGTCCTGGCGAATTGAAACGTCTTGATAGGGGaggaaaagaaagtaaaagCGATTCCAAGATTGTGGGAGAGCA - 45548_PtRNAdb chr-3.trna43-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 43 37875659 37875578 Ser AGA 0 0 77.1 42.80 34.30 Inf Ser 110.5 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. CGTGTTAACGAAGGAAGGcacaaaaacttaaaaataaaactttaagaagattagttaaaaattagtttaaaaagttaattatttaaacatagcAGCAGAG CTTTGTTGAGTTTTTCCTTTATTGAACTCTCAGCTTCTTGCAGTCTGTCCACTACGTTTACAGcttcatttatttttgtcattttacatGGAAAGGAAAG - 45549_PtRNAdb chr-3.trna44-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 44 33273330 33273259 Glu TTC 0 0 51.1 30.60 20.50 Inf Glu 79.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGATTTAATTCCTGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>.........<<<<<<<<<<<. TTATGTTGAGTTTCTATATAATAGAATGAGTAGAAGCTCTGGAGCTGGTCAATTTTTGTTTACGTTTTTCCTATAACAGTACAGTGCTTCTCTTGACTGT atcatttttaataattaattgttgacgTGATAATTCATGTGTATGTTACATcaataaagttaaattttttcattcattttgggATAATTTGACAAAGAAT - 45550_PtRNAdb chr-3.trna45-Thr-CGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 45 31179661 31179590 Thr CGT 0 0 81.5 56.50 25.00 Inf Thr 89.4 Phanerogamae -NA- Dicot GCCTCTGTAGCATAGTGGTAGTGCGTTCGCTTCGTAAGCGAAAGGtCGCGAGTTCGATCCTCGCCAGGGGCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAAGATAGCAGTGATTTTGAACAACAGACGGGGAAGCACGATGAATCCagcttttttttatagaaacaaAAACTATATTATTGAAGACGTGATCAGACAA atttattttgtttttatgttcAAGTCAAGTATTGGGCCACAGTCGGCCATGGATCAAGCCATAATTATATCCTTTCACTGAAATGTAGCTCTGAATTTAG - 45551_PtRNAdb chr-3.trna46-Ala-CGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 46 19364676 19364604 Ala CGC 0 0 65.0 40.90 24.10 Inf Ala 97.6 Phanerogamae -NA- Dicot GGGGGTGTAGCTCAtACGGTAGAGCGCTCGCTTCGCATGCGAGAGGcACGGGGTTCAATTCCCCGCACCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GACTTGTTTTGCCAACTCTAATATATCAAGTAGTATATAAGGTTTGTGGCAACGTACCattaataactatatatatGGAAAATGTGACTTAAATGACATT CTACTTTTTTAATTAGCATTTCTTCATCTTGGCTGTCTCGCTCCTTCTCCAAACAGTccaaaattttgtataaaacaACGCCTCTTCCTTTTGTCTCTAC - 45552_PtRNAdb chr-3.trna47-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 47 19197707 19197636 Gln CTG 0 0 74.3 49.60 24.70 Inf Gln 103.3 Phanerogamae -NA- Dicot GGTTCCATGGTCTAGTGGTcAGGACATTGGACTCTGAATCCAGTAaCCCGAGTTCAAATCTCGGTGGAACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gaatcaatatttttatttaatataatgagGTGGTTGAACTTTTCAGGGATGGGTcaaaagtaataatataaagCATAAAATTGCGAATACTGTCGTCTAA tatacttttaattttttttctaccaACCAACTAGTTCATGGCTTCAAGCTTTATTTATGGCTTAtgcaatgaaaataaagaacagGTTAATCTCCATTGT - 45553_PtRNAdb chr-3.trna48-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 48 15706705 15706634 Asn GTT 0 0 61.1 44.50 16.60 Inf Asn 55.1 Phanerogamae -NA- Dicot TCCTCAGTAGCTCAGCGGTAGAGCGGTCAGCTGTTAACTGATTGGtCATAGGTTCGAATCCTACTTAAGGAG 72 >>>>.>>..>>>>.......<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<.<<<<. ATACAAAGAAGTTCTGAGGGTTACAAAGAAAAATTTGAGTTCATATTGGTCATGGGTTGAGAACGGGAATTGAATTTTATGAGATCTAATCTCCCGTTGT ATTTGGTTCATTCCAAATTAAAGAATTCAGAATGTTAGAATGAAAGGGTTCGCTTTGACCGTTAAGAGTAGGTAACTCATTTCCTGTGTTTTTGTTTCTA - 45554_PtRNAdb chr-3.trna4-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 4 5356577 5356650 Met CAT 0 0 41.1 24.90 16.20 Inf Thr 52.0 IPD:-50.70 Phanerogamae -NA- Dicot GCATCCATGGCTAAATGGTtAAAGCGCCCAACTCATAATTGGtGAATTCGTAGGTTTAATTCCTACTAGATACA 74 >.>>>.>..>>>..........<<<.>>>>>.......<<<<.<.....>>>>>.......<<<<<<.<<<.<. ATGTCCTTTCATTGATTCCTCCTAAATTGCATTAATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTACGAAGATCTTCGCTAA TGCCAATGGGACCTTCCAATAAGTCTATTGGAATTGGCTCTGTAGCAATGGAATCTCATCATCTATACATAACGAATTAGTGAGGTATATTCATATTATA + 45555_PtRNAdb chr-3.trna50-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 50 13883052 13882980 Phe GAA 0 0 48.1 39.50 8.60 Inf Cys 38.7 IPD:-4.20 Phanerogamae -NA- Dicot GTCAGGATAGCTTAGTTGGTAGAGCAAAGGACTGAAAATTCTCGTGgCACCAGTTCAAAACTGGTTCCTAGCA 73 >>.>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<.<<. TTCGAAActtttaatttgatactttttcattttctagtttcatttttaattgacaTAGACCCAAGTCATCTAACATTATGAGGATAATGTGTCGGTAATG tatgattaatttttatgagtATCTACTCTACAAATTAATTGATATGGATCAACATAATACATACTTTTCTAGCTAGGTATCTGAGAGTAAACcctctctt - 45556_PtRNAdb chr-3.trna51-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 51 10983846 10983773 Ile AAT 0 0 79.3 55.80 23.50 Inf Ile 104.3 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TACGCTAAATAATCTCCATTTCATACAAAACTTAAATTCTATTTCTGAGAAGAAATTTATAATGACGATTGTGTAACGTAATGCAACTGGTAAGCAAACA TATTTTCATTggttttttgtttcatttcggCTCAATGGTGGGTTTCTTAACAATCCCTATTATtagaatatatatgtatttattgttttatttttaattg - 45557_PtRNAdb chr-3.trna52-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 52 10175155 10175075 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. ttatgagcATTagatcaaaccaaaatttcatgtatatgattgtacaaaatcaaatttgatgtaGAAAATTATTTAGATCTTTttggttaaaagaccagat TTAATTTTCATTGATTTTGGGCCATTAAACAAAAACCAAAGCAATGGGTTTGAACTGGTAATTGGAGCGGAGAAGGAGAGCAAGCTTTGTCCTCGACACA - 45558_PtRNAdb chr-3.trna53-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 53 8703054 8702984 Gly TCC 0 0 27.2 17.40 9.80 Inf Gly 27.4 Phanerogamae -NA- Dicot GTGCTTGTAGTCCAACGGTtAGGATAATTGCCTTCCGAGTAATAGaCCCGGGTACGACTCTGGCAAACGCA 71 >>>.>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>........<<<<<<<.<<<. CTGAATTGTGATTCATAGTGCTGGATGACAAGGATAAAAAGAGGTAACATTTGCTTGTTTGAGCTTAATTTAAATAGACCTTACCATTTAAAGTCCAAAA GTTTCTCTCTCGTTTTAACTTTGTTTTTCAACTACTGAGAATGAGAAACTGCATTTCATGTCTCTTGTATGGTTTCAGGGAATTAATTATGCAATCATGA - 45559_PtRNAdb chr-3.trna54-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 54 8702210 8702139 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AAAGAAATCGAAAGAAGTTTAAGGTGGGTGTGGAGAGAATGGAGGAAGAGTtgtaaaattaaactttataacTATAAATCTTTAAATAATGTTTCATTCA GTTTGTTATGGATTTTTTGCGAGGCTTAGTTAATTTTCCAACTATTTAGAAActgcattttaattttttttatagaaatatttgaacattaaaatattct - 45560_PtRNAdb chr-3.trna55-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 55 6200450 6200379 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. atacttttaattaaaaaaacctaTCTATCGGTTCGGGAGGGACTTTAATTATTCATAACTaagaataatatattataaactaCGACAAGTTATCACCATC AAGCCCCGATCCCATCCGGATTCAccttttttggtttttgtgaCATTTCAATGGAAAAAGATGTTAGAAATTAGCATGTGTTATATAGTCTTCTAACTTT - 45561_PtRNAdb chr-3.trna57-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 57 4267448 4267375 Thr AGT 0 0 75.3 47.40 27.90 Inf Thr 89.8 Phanerogamae -NA- Dicot GCTCTTGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACAAGAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GCTAAATGCGAGTATGTTCGATTTAGGTATATTAAACTTAAAGGCGGAGAAAAAAGGTGAagtagaaataatttaataaaaagaaagcgTAGGTCAGCCA AAACAAAATGCAATGATTTTGCAAGTAGAACAATTTTTCCAACTTTGACCTTATTGTTTGgtcaaattctgctattagtccctatactttgcataagtta - 45562_PtRNAdb chr-3.trna58-Ala-CGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 58 3912246 3912174 Ala CGC 0 0 67.5 42.90 24.60 Inf Ala 99.2 Phanerogamae -NA- Dicot GGGGATGTAGCTCAtATGGTAGAGCGCTCGCTTCGCATGCGAGAGGcACGGGGTTCGATTCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. taaaattaattaaatataatattttgtagttttagtttttatatagtgcgatattattaacatattaaaaatgttatatttaaataaatattgtaatcTC acacttaattattttatgggcTCTCAAACAAGCCCTAACGAACTTGACTGAATTGTTTTTAGAGGTTCGGCCCAAATCAGCAATATAGTTTCGTCCATTA - 45563_PtRNAdb chr-3.trna59-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 59 3896042 3895970 Arg CCT 0 0 71.7 55.90 15.80 Inf Arg 81.4 Phanerogamae -NA- Dicot GCGCTTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAGGcCGTAGGTTCGACCCCTACCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. CTgactttctttttattgttaaatataagtttaaagttaaagaagaaaaaggtcAGAGATTTAGAGTTAAGTAAGGATAGTAGTATAAAGATGTCAACTG TAAACTTTTGGATATGATTAAAAAAaccatgtaattaaattttgagttaattgcaccaaatatttttaaattataatttttattttaaattgattttcaa - 45564_PtRNAdb chr-3.trna5-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 5 8843457 8843544 Ser GCT 8843495 8843510 44.0 36.80 7.20 Inf Ser 50.2 Phanerogamae -NA- Dicot GGAGAGATGGCTGAGTGGActAAAGCATCGGATTGCTAATTCGTACTGAGGGTTCGAATCCCTCTCTTTTCG 72 >>>>>>>..>>>...........<<<..>>>>.......................<<<<....>>>>>.......<<<<<<<<<<<<. ataatctatatAACATAATCTATATAACAAAGTAAAAAGGGTTTTTATTCAAGTCTTTCTTTTTGCGTGCTGTAACATAGTAATTATCTTTTCTCAATTA TTTTGGTTTTTGGTAGTGGAATAGATCAAATCCTAATACCATTTCTAAAAAATGAAGCAAGGAAACTACGCCCTTTTTTTAATTCTTCGCGTCCAGGATT + 45565_PtRNAdb chr-3.trna60-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 60 2720707 2720634 Val AAC 0 0 62.4 42.00 20.40 Inf Val 85.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCCGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<<<<<. aacagcataatgacttaaatgaaagcACTTGAATAGCGACGTTGAATACTAATACTCAGAATTGATAAGTAAACATCTGCAATGTGAAGATTTCAACAAT atgttttagtttattttccttctttttgggGTTTCTCCACGAGCCACTTATTTGGGCCAGGCTGCTATGATATGGTTCAAGTCCATACGGCATGTTCACA - 45566_PtRNAdb chr-3.trna61-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 61 2021666 2021596 Gly GCC 0 0 29.9 12.10 17.80 Inf Cys 20.0 IPD:-20.00 Phanerogamae -NA- Dicot AGAGATATAACTTAGCGGTAAAGTGTCACCTTGCCGTGGCGAAGGTATCAGTTCGAGCCTAATTATCCTTA 71 >>.>>>>..>>>>.......<<<<.>>.>>.......<<.<<....>>.>>.......<<.<<<<<<.<<. CTCCAGGGATAtccctttttttaataagaatttGCATTGTTGAGTTTCCCGATCCTTTGGCTTAGGATTAGTCAGTTCCATTTCTTGATGGGGGCAGGGA AACTCAATGTAAGATAATAATGTGATCGGCCCACgactttaaataatttttttataaaaaatttatgttatagaGCTGCTTATGCTTTAACGACACAGAC - 45567_PtRNAdb chr-3.trna62-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 62 974841 974770 Gln CTG 0 0 75.3 51.20 24.10 Inf Gln 103.1 Phanerogamae -NA- Dicot GGTCCCATGGTCTAGTGGTcAGGACATTGGACTCTGAATCCAGTAaCCCGAGTTCAAATCTCGGTGGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TGTACCAATACTACACTTTTCGAAATAGATAACTGAAAGTGACTGTTTTTGTagttttattaatgattttaaatatttttgttattgcaGTCAACAACTT tttttattttaccctttattcaTCTTCATAGGTTAATGAGCCAGATTGAAGCCCAAttttaaaaagggtaaacttACAAGTAGTCCCTTAACAattagta - 45568_PtRNAdb chr-3.trna63-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 63 897618 897545 Asn GTT 0 0 81.8 56.30 25.50 Inf Asn 94.2 Phanerogamae -NA- Dicot GCTGGAGTAGCTCAGTCGGTtAGAGCGTATGGCTGTTAACCATAAGGtCGGAGGTTCGACCCCTCCCTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GATCAAAGAGCTTCAAGCTGTATAAAAAGAACACTCAGATAATACAcaagcatacatatatattcatacgTACTTTAATAGGTTTGATTTTTGATCACGT TTTTAGTCTTTCTGAAACTTTTGGTTTATTCTGGTTTTAGTCCTTTTGGTTTAATTCAGGCTTTAGTCCTTCTAAAATTTGActtctttatattaatttg - 45569_PtRNAdb chr-3.trna64-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 64 826756 826685 His GTG 0 0 63.0 33.70 29.30 Inf His 86.8 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ATTTTCCTTCCCccccacccttttttttttcttttgcatgatAGAtaacctaaatttaaaattaccaTTAAATCATTACTCACAAAAGCTGAACAACAAA tcaaaaatgtattatttttgcatttttttgtcAGCTAAGCTTccaatatgtttttatttttttaattctatttttccGTTTTACAATCTATATTCGGAAT - 45570_PtRNAdb chr-3.trna6-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 6 8844688 8844759 Gln TTG 0 0 28.6 21.90 6.70 Inf His 22.8 IPD:-18.10 Phanerogamae -NA- Dicot TGGGGTGTGGCCAAGTGGTAAGGCAATGGGTTTTGGTCCTGcTATGCGGAGGTTCGAATCCTTTAGTCCTAG 72 >>>>>>...>>>.........<<<.>>>>>.......<<<<.<....>>>>>.......<<<<<.<<<<<<. GTAGCAAGAATCTATTCAATAGCTATAACTATTTGGAATTGGAATTGACGAACAAGGAATACCCAtattagtatttagtattttcAAATAGAAATCTAAA AGCATACTCTATTTATATATCAGAATAACCATATCAGAATCTAAATtgctctttttttgtttttaataaccTTCTTTCTAACAGTCAAGTATTGGAGAAA + 45571_PtRNAdb chr-3.trna8-Ser-CGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-3 8 12551524 12551605 Ser CGA 0 0 78.2 45.90 32.30 Inf Ser 121.6 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTCGAAATCTGTTGGGCTCTGCCTGCGCAGGTTCGAATCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. GTAATTTTGGCACAATGGCAACagtctttctttccttttattctttttcttaggAGTggggaaataattttttatttattataaatcatATAGTCTAAGC attaattgttttttttaccgGAAGAAGTAAACCACAGCCACATGggttaaattaaacataaaattaaatcgtcTTAAAAggtgtaattaaattaaattat + 45572_PtRNAdb chr-4.trna10-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 10 8789617 8789689 Lys TTT 0 0 89.6 66.00 23.60 Inf Lys 96.4 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCAGTGTAGGATAAGACTGCAGTCGCATGATCAATGGTACTGTTATGGAAAAACATTTtcaattgattaatataataaataataattgtcAAAATCACAA TTTTGTTGATAATTTCATCagctcaattttaaattttcttgttgtCTTTTAAGATATGGTCACGTGGAGAagagagagaagagaaaaaggaaaaatagaa + 45573_PtRNAdb chr-4.trna11-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 11 9409128 9409198 Gly CCC 0 0 66.0 29.20 36.80 Inf Gly 87.4 Phanerogamae -NA- Dicot GCGCATCTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGaCCGGGGTTCGATTCCCCGGATGCGCA 71 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CCCACTATTTTCTTCCTCTTTCTCCTCCCATGTAAATGGTTTCTGCCTTGATTAGTTAGTAGTGGTTAAATTAAGATTAATGGGACACAAGGTCAAATCA AATTCCTACGTTAGCGACATCCATCCGCACGGTGGTAGATCAGACACCATGCGAGCAGTTCCTTCGTTATTTTTTAGTTCTACAAAACCTCTACTGACTA + 45574_PtRNAdb chr-4.trna12-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 12 10615910 10615981 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GggaaataataacaaaaaaaatgtaccTGAAGGGTCGGGCGGGAAACTAttcaattaaacttaaatataaataactttgTTTGAGACCAACAAACAAAGT TCGTTAATTTTTTGTGTCACTGACCAATATGTCCACGTGTCGGCGCCTCTGagccaaaaaatttaaaaaaaaaaggaaaaataagttCCGAGAATCGAAC + 45575_PtRNAdb chr-4.trna13-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 13 21360698 21360771 Ile AAT 0 0 82.4 58.90 23.50 Inf Ile 107.0 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAAACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttttaggtttttaaaattttcaaatttaaaattatgggTGAACATAAGGCAAGACTGTTTAGAGAgctagtaaaaaaaaaaagaagagattaaATATTAT TTGCATTTGTATTactatttttgtatgtttaacACGTTATCGCTTGGGCTTGTGAGTTTTGCAGCTCTTCTTAATTGCGACATGAGTTTTTGGGTTTGTA + 45576_PtRNAdb chr-4.trna15-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 15 24681587 24681674 Ser GCT 0 0 43.4 35.00 8.40 Inf Ser 55.2 Phanerogamae -NA- Dicot GGAGAGATGGCTGAGTGGActAAAGTGTCAGATTGCTAATCTGTTGTGCGAGTTATTCGTACCGAGGGTTCAAATCCCTCTATTTCCG 88 >>>>>.>..>>>...........<<<..>>>>.......<<<<..>>>>>>>...<<<<<<<.>>>>>.......<<<<<<.<<<<<. NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTA TTTCGGTTTTTGGTAGTGTAATAGATCAAATTCTAATACCATTTCTAAAAATGAAGCAAGGAACTCTCCCTTTTTTATTCTTCGCGTCCAGGATTACGTC + 45577_PtRNAdb chr-4.trna16-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 16 24682834 24682905 Glu TTC 0 0 23.1 15.00 8.10 Inf Cys 20.6 IPD:-20.60 Phanerogamae -NA- Dicot TAGGGCGTGGCCAAGTGGTAAGGCAACGAATTTTCGTCCCGcTATGCGGAGGTTTGAATCCTTCTGTCCCAA 72 >.>>>>>..>>>.........<<<.>>>...........<<.<....>>>>>.......<<<<<<<<<<.<. GTAGCAAGAATCTATTCCATAGCTATAGCTATTTGGAACTGGAATTGACGAACAAGGAATACCCATATTAGTGTTTAGTAGTTTCAAATAGAAATCTAAA AGCATATTCTTGAGTCAGTAATGAGTTCGcttgaaaatcatttttttcgTAATGAATTAATCTGTCTTTTTCATCTGAATCCCATTttgttaaatcttta + 45578_PtRNAdb chr-4.trna17-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 17 35074022 35074113 Ser AGA 0 0 21.5 13.80 7.70 Inf Pro 40.7 IPD:-40.70 Phanerogamae -NA- Dicot GAcATttGGTCTAGTGGTATGATTCTCGCTTAGAACGCGAGAGGtCTCGAGTTtgattcaaaatataaataactCAATCCCCGTTTGATTCA 92 >>.>....>>>.........<<<.>>>>>.......<<<<<......>>.>............................<.<<.<....<<. caatatgaagtctataatgccactaagtcaataagtaaatataattttcaaacataTGTAATATTTGCTCCAGGGAATatgtcaaaatcttcaaatataa tatgaaatataatattttcctcattcacaatctcaatatgagatccattatgaatatcttttaaaactaatgCATTAACCACCACAAACTTTGTGctttt + 45579_PtRNAdb chr-4.trna18-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 18 35158849 35158922 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGCTGTAATTATAAGTAAATCCAAGTGGAAAAAATTTCTATTCACAATATCAGATTCtacattttaagtttataatacaaataaaagGGCATTCTAACTT TTTTTTATATGTCTTCTGGCAGAGAGGAAAAAATCATAacgccgttgccggggatcgAACCCGGGTCACCCGCGTGACAGGCGGGAATACTTACCACTAT + 45580_PtRNAdb chr-4.trna19-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 19 35548849 35548920 Gly CCC 0 0 25.3 11.00 14.30 Inf Gly 43.0 Phanerogamae -NA- Dicot TaGCaATTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGGaTGGGGTTCGATTCtCCGCATGCACAA 72 >.>>.>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>.......<.<<.<<<<<..<. TTATCTCTTGTCGGTTAAGGAGGCGAAGCCGCCAAGGGGCATTCTAGAAGGCttctaaaataatatagaaaatatagaaaataaggTCCTATCAAAAGTC TAATCgtaatatgtaattttaaactACATCACAACTCTGCATTTGACACACCTTTTTTATGTTACATTTTTTTGGAAAGTAGCCGAAAACATGGTTGAGG + 45581_PtRNAdb chr-4.trna1-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 1 288196 288267 His GTG 0 0 63.0 33.70 29.30 Inf His 86.8 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aaaaataaataaataaataaagctgCCTTCCCTTGACTTATTTGGTTGTGGACTTTATAAAGAGATTAGATACTTTTGTTGCTCAATAAAGAACCATCAT TATATGTTCattcatttttcaataaataataagaGATTTAGGATTTTACCTCGAtttgctaaaaaataaaattttattttaattagtgcTCATATGCTCC + 45582_PtRNAdb chr-4.trna20-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 20 45138401 45138471 Gly GCC 0 0 63.5 44.70 18.80 Inf Gly 92.5 Phanerogamae -NA- Dicot GCACTAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GCTGCTTTCTGATGCAAAGGGAAATTTGCTGTTTTCTACGGATTGTATTTTGTACACCTTAGAAATCGAGTCCAAGTATTCGGTCTCATGTTTCAAGCAA TACCTGGAGCTTGAATCCTTTATTCAATCTGATTTCAGGGTGAGTCAGCAGTGTTTCTGAGCCTTCAGCTTGTTTTGAGATTCCCTTACAGCTAATTGGT + 45583_PtRNAdb chr-4.trna21-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 21 45239864 45239936 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGCGGGAAGAAAAGATCAGAAGAGAAGCcagaaataaaatacatttacaAACACCATAATAaaagtttattaaaatattttttgaagaaagaTACAACAA CCTGACTTACCTTACGTTTTTTTATGCTGTTGCCGTGACATGAATCGCAAAACATTTCATTgctcaaataattataatccaTAAACATGGGCCAATTCCC + 45584_PtRNAdb chr-4.trna22-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 22 46761235 46761306 Asn GTT 0 0 38.1 26.40 11.70 Inf Asn 40.9 Phanerogamae -NA- Dicot TCCTTAGTAGCTCAACAGTAGAGTGGTCATCTGTTAACTGACTGGtCGTAGGTTCGAATCTTACTTGAGGAG 72 >>>>>>>..>>>>.......<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. CTAAGAACCTGttcaataacataaaaaaaatttaaattttttaaaagattataaatttattttttaagattgaACTCTATGAGATCTAATCTCCTATTGT atttgatttattctgaattaaagaattcataatgtcAGAATGAAAAGCTGGCTTGAGTAGTGTCTTGATAAGAACATCAACAATTTGATTAGCAACTTAT + 45585_PtRNAdb chr-4.trna23-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 23 50926111 50926182 Trp CCA 0 0 44.0 30.50 13.50 Inf Trp 62.5 Phanerogamae -NA- Dicot GGATTTGTGGCGCAATGGTAGCGCGTCTGACTCCACAGCAGAAGGtTGCGTGTTTGGTTCACGTCAGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. AGATCGTGATGTCTTAACCACCATATATGCTCAATGTGGATTCTAATAAGTTTGCATTATTaagagtaaaataatataaatggagCACCTTATCAACAGG ATCCTCCGATCCTTCCCTACCTgaatccattttcttttttggtccgTAAATCTGCCTCTTTTTACATGTTCAAATGGCTCGATCCAGGTTCCATTCAGGA + 45586_PtRNAdb chr-4.trna24-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 24 52081989 52082059 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GCAGGCTGCTTTCCACATGTCCATCCGCATCTTATCTGGAAAATAAAGTAtgaatacataatatatattaattaaatgaaaaaacacCGTTAACAAGAGG TATCAATTTTCCGTCGTCATTCTTCAGCAGGAAATTATCCCTATTTTATGGATCGACCTCTTTAACCATCAATCTAGCATCTTGTTGACGTTATTTCTGC + 45587_PtRNAdb chr-4.trna25-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 25 53574964 53575035 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGGAGCTAATTCTGCATGTTGTGTAAAGTAAGGGGACTAAATATGAGATTTTacctatttatattattaataaaggTATCTTCAATTAAACGTCAACTA tttttgaaataatttcttaatttggGCGATCCGTTTTCATATTTGTTTTGGGCCAAGAGCAATTATTTTTTACTCAATATCCTAATTAGATTGAAATTAT + 45588_PtRNAdb chr-4.trna26-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 26 55126549 55126621 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aattaCTAAGAGTATAGGGATTTATGACGCATTTTAACCTCCATTGTTTAAcgtttcttattttattattttaaaaatattaattcctTGCTTTACAAAA ATTGTTTTTCgtcatttttacttttctttttggttaaatttgttgttaatcTGTATACTTTGAAAACAATTGAAATTTAGTCCTGCTACTTTCTTcgctt + 45589_PtRNAdb chr-4.trna27-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 27 55430098 55430170 Gly GCC 0 0 37.4 19.70 17.70 Inf Gly 51.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGATTAGTACCCTGCCACGGTACAGAccCCCGGGTTTGATTGCCGGCTGGTGCA 73 >>>>>>>..>..>.......<..<.>>>>>.......<<<<<......>>>>.........<<<<<<<<<<<. CTATGAATTAAATCCATCTTTTAGGTaattaatttagtcttgattcgaTCAAGAATCTCCACCTTtagtttagtttcaaaattttattctaaataattAA ATCACACTTTTTTGCTCTATATAGCTATTGAAAATTTTTCCCCAATAACACAGGAAAAAAAAGGTTccaaatgaaaaacaaattattGGATTAGAGAATc + 45590_PtRNAdb chr-4.trna28-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 28 60551230 60551301 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTACTGTGTGATTATAACATTTAAAGTCAATTAAAATACATACGACTcgataaataaattgaaacaataaaaatttatggtcTCAAACAAAGATCAATAA TCTCTTCGTTTGGATTTTTTTCATGATGTGGGCTATGAACGTACACTCAATTTTACTACATCATATATAATTTCACATCGATTAAAATCAAtctctatat + 45591_PtRNAdb chr-4.trna29-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 29 60552827 60552898 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGTAAACGGATCTATTAATTGACATAAAAAGCAGAAATTGGCAAACAATACccacaaatatattatttaaatgggCCTAGTTTCAAACAAGCATCAACAA TTTCATTGTTGGGCTTTTTCGTAATTCTGTTTCATAAAGTGGGCTATTTTATATTAAGTATTGATTTTGGGCGGAGATAATTGATGTGGaccatccattt + 45592_PtRNAdb chr-4.trna2-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 2 709369 709455 Tyr GTA 709406 709419 74.4 42.90 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>.....................<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGATGAAGTCAATATTTTTCTCTACAAGTGGAGAAGCCTGTTGGTATATACCAAATACAcattatgataaattaaaaaattctggCATCTCTAAGCAAG atttttttattttttattttaactttttaggttACAATTTGGTAGCCAAAATTGATTTCAGTGTTTAATTTATACACGATTTCTTTTTCCTGCTATTTGT + 45593_PtRNAdb chr-4.trna40-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 40 53263385 53263313 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGGTTCTTAACTTTGTGGTCGTACGGTGGGCTGCAATTTTATTTGTCATACTAATTTTGTACAGTTATTTACAACAAAGAGAGAACAACTTACAACCAG TACTGTTCCTTTTTTCAAATGCTGTATTGTTTCGTTCACAACCTAAATCCCATTTACATTTTGGGCCTCATGATATACCAGAATTGGCCCATGAAAACTA - 45594_PtRNAdb chr-4.trna41-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 41 50508882 50508802 Trp CCA 0 0 52.5 34.10 18.40 Inf Thr 48.6 IPD:-19.30 Phanerogamae -NA- Dicot GAATCGCtcTAGTTTAGTCaGGTAGAACATGGGTTTCCAAAACCCAATGtCGTAGGTTCAAATCCTACagagtGTGATTCA 81 >>>>>>>....>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.....<<<<<<<. atcaaattatatatgatattataggTGTGCACGATATATTggggttaattataaaataaaagaaactttttttttttacaatcttatttattataataag ACTCTTATTAGGTCAAAAATTACactaaactgaaaaaaaaattgaacaacaATTCAAAATTGACCtccttgaattaaattattaaattaattaaattaaa - 45595_PtRNAdb chr-4.trna42-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 42 50097654 50097583 Cys GCA 0 0 78.2 58.20 20.00 Inf Cys 106.0 Phanerogamae -NA- Dicot GGGTCTATAGCTCAGTGGTAGAGCAATTGACTGCAGATCAATAGGtCGCCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CATATAGGACATGCATAGGAAAACTTTGATAAAAGGAGGAAAAATAAAGGATGCATAAATACacaataataaagataaatttgcCACCACAACAACATCA AATTCGGTTTTACTTTTTCCAGTCCAGTCTGACACCTCAAATTTTGTTGGGACTTATTTGGAATAATATCTTTTTAAGTCCCCAATTTCCTATTATTTTG - 45596_PtRNAdb chr-4.trna43-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 43 43902935 43902852 Leu CAA 0 0 81.0 54.60 26.40 Inf Leu 125.6 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.><.<<<...>>>>>.......<<<<<<<<<<<<. gaatttttggtgattttctcAACCAGGATAATGCATAGAAATAATTCAAGATTGATACATCTATTACAAGCTTTcaagaaatattttatataacaaCAAA TTTTCCCaatgcttttttctttttgggtcaGTTTTTTTACTTCTCTCTCAGTTAAGCCTGGGCTAGTtttattagggtaaactatcaaaatagtcacttt - 45597_PtRNAdb chr-4.trna44-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 44 43885512 43885441 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTATTAATGACAGAAAAACAATATATCTGTTTTCAGGAATAGTTGGCCGACACTTTTTTTATGGTACTAATATATTCTATATGCCACCCATTCCAGGCAG TATGATATTTTCTTTGCCTTTTGTGAGAGCATTTTTTATGCATAATATAGCAATCAGATCCAGTGTCAGCATTGGATTTTTAGCAAAGCTATCAAAGAAT - 45598_PtRNAdb chr-4.trna45-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 45 37643578 37643498 Leu CAA 0 0 22.8 15.40 7.40 Inf Gly 36.0 IPD:-24.60 Phanerogamae -NA- Dicot GCCTTGGTGGTGAAATTGTaGACACACGAGACTCAAAATCTCATGCTAAAGAGCGTGGAGGTTCGAGTATTCTTCAAGGCA 81 >>>>>>>..>>>..........<<<..>>>>.......<<<<..>>>....<<<..>>>>.........<<<<<<<<<<<. CCAATCAATAGAAATACTCCAACACTCCACCTTTGTCATATATTCCATACATCACACTAGATCGATATCATATTCATGGAATACGATTCACTTTCAAGAT TAATATTGAGAATACTCATTGAATTGGAATAAATTCGGCAACGGATCATGAGATCTTGGTGATCTTCTCTATCTAATGAATTGGGAGTCCACTTTGAAAT - 45599_PtRNAdb chr-4.trna46-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 46 37298594 37298511 Leu TAA 0 0 66.7 28.00 38.70 Inf Leu 81.3 Phanerogamae -NA- Dicot GCTGGTTTGCCCGAGAGGTtAAGGGGGAAGACTTAAGATCTTCTGTATATTAAATACGCATGGGTTCGAACCCCATAGCCAGCA 84 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>.....<<<<..>>>>>.......<<<<<<<<<<<<. TAGCATTTGTTAGTTTAATGTCCGTCAATGGTAGAAACTCGCGAGATGTTTTAATTGTCaagttttaaatatagtaaataTTTTAGCCATTGTGCATCAA aattaaaatatttttaatcagaTGTTAAATGTAGCCCGACAACCATAGCcaacaagataaaaaaattctactcaGGTTTAGCTCAATTCTATTATGTTTT - 45600_PtRNAdb chr-4.trna47-Ala-CGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 47 36077937 36077865 Ala CGC 0 0 68.3 44.10 24.20 Inf Ala 99.2 Phanerogamae -NA- Dicot GGGGGTGTAGCTCAtATGGTAGAGCGCTCGCTTCGCATGCGAGAGGcACGGGGTTCGATTCCCCGCACCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAATATATGCAGTAATAATATGAAACTAGCGAGTATCTTTGCAGTGGATGTGAAATTCTAGTATACGTTTTTAAAATTACACTTCACTTGAAAACCAATC AAATTATCCCAGCTTTGAATAACTCAGCAGTCGGCGGGTTGTTCATGATTCAATCATActgatattttttttctgacAGCGATCAAAGGACTCATAAATG - 45601_PtRNAdb chr-4.trna48-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 48 35912756 35912685 Gln CTG 0 0 74.3 49.60 24.70 Inf Gln 103.3 Phanerogamae -NA- Dicot GGTTCCATGGTCTAGTGGTcAGGACATTGGACTCTGAATCCAGTAaCCCGAGTTCAAATCTCGGTGGAACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TCTCCcctaatattttatcattaatttaatctaatttcggatatatatatatattattctatatatatatataaaaagtagaGAAGTACGGGCAGAATAT ttgctttttattttctgCCATTCACTGAACAAATGTTTGAGTTGTATTACTAATGTACCCCCTTTggattttctttcatttcttttatatatatatatta - 45602_PtRNAdb chr-4.trna49-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 49 35159033 35158962 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 94.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AATTGGTTAAAGCTTGAATAGcatttgaaaagtttttatatGATGAAGAACGGAAGTCAGTTTCAATAAAGTTAAATACTTATTTCCTTCCAACAGCAGC tTATGATTTTTTCCTCTCTGCCAGAAGACATATAAAAAATGGCGTCGCCCGGACTCGAACCGGAGACCTTCAGTGTGTTAGACTGACGTGATAACCAACT - 45603_PtRNAdb chr-4.trna4-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 4 3555795 3555868 Asp GTC 0 0 52.6 40.30 12.30 Inf Ile 53.2 IPD:-24.80 Phanerogamae -NA- Dicot GGGATTGTAGTTCAATTGGTcAGAGCACCGCCCTGTCAAGGCGGAAGcTGCGGGTTCGAGCCCCGTCAGTCCAT 74 .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.. attaaaatatatgcataataacaaattaagtccttaatttttatatttttatcaatttggactttattctttttcttaagtaaaatttgacgTTTTCCCT tttttaaaaagagttgaatttaacaataacttttcacaaaaaaaaaagaattgtttttttaacaaaatattgaCATGACAGCTCGTATAATAATTCACgt + 45604_PtRNAdb chr-4.trna50-Ser-GGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 50 32001957 32001871 Ser GGA 0 0 45.9 25.00 20.90 Inf Ser 46.4 Phanerogamae -NA- Dicot AGAGAAATGGCCTAGTGGTtcAAGGCGTAGCATTGGAACTGCTATGTAGACTcttgTTTAtCGAGGGTTCAAATCCCTCTCTTTCTG 87 >>>>>.>..>>>>.........<<<<.>>>>>.......<<<<<...>>.......<<....>>>>>.......<<<<<<.<<<<<. GAACCAATTAGGTTTACAACGAAACCTAAAAATCAATCACTGATCCAATTTGAGTACCTCTACAGGATAGACCTcaatagaaaactaaaataattatgta CACCTTCACCTAATTCGCCTATGTAACTGACTacaatttatcaaatcaaataagAACATATACTAAAGAATTAGAACCTTCTTTAGTATAGAGTCTCTAT - 45605_PtRNAdb chr-4.trna51-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 51 31847212 31847133 Leu TAG 0 0 69.5 48.50 21.00 Inf Leu 111.5 Phanerogamae -NA- Dicot GACAGTTTGGCCGAGTGGTctAAGGCGCCAGATTTAGGCTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACAGCTGTCA 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. CGGCACGAAACGTGAGGTAAAAATATTGACGTGCAAGCCTAACTCTAAAAGTTTagctaaatatataaataaagtgCTTAATAAATATGATCAACGAATT AGTTTTATGTTACTTTTTTGTGTAATGGGCTTCAAACTTGAAAAAAGAACAACTAGAATTTCTTTTTGACttagttgttttttttccttgtatCATGATT - 45606_PtRNAdb chr-4.trna52-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 52 28416053 28415981 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gtgtaattatatggaaatatttaaaacatgagtacggaactttaaaaaaaagcataataacagaatattttaaataacttgAACCTTTCCTTCATCACAC TCTCGTTTTTATAATTCGGTCGAATTTTCTTTGGAGTTGGGTTACTTTGAATTCTTATTTTGAATTTGCATCTGTTTGACTTAGATGGTTctgatgaatt - 45607_PtRNAdb chr-4.trna53-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 53 24677495 24677424 Arg TCT 0 0 51.1 22.40 28.70 Inf Gln 64.5 IPD:-27.30 Phanerogamae -NA- Dicot GCGTCCATTGTCTAATGGAtAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATCTTATTGGACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CAATACAATTTTTCACATGTTCTTTAGTTTTTCCAaccaagagaaaagaagaaaccgAACAagagaaaaagtcaaaaatgtcaaaaaatccTAATGAAAA ATTTAGAATCAATTTCTCTATATTCCATTAAGTTAGAATTTCCTATTTATAATTGTTCCTGAAGTCGAAAACGTTCCATTTGGTCCTGAATAGCGTCTTT - 45608_PtRNAdb chr-4.trna54-Val-GAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 54 21336143 21336072 Val GAC 0 0 47.0 15.40 31.60 Inf Cys 54.5 IPD:-25.30 Phanerogamae -NA- Dicot AAGGATATAACTCAGTGGTAGAGTGTCACCTTGACGTGGTGGAAGtCATCAGTTCGAGCCTGATTATCCCTA 72 >.>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<.<. aatattggcAAAATGatctttaaacaaaataattgtAGACAAAGTTTCTAAATCCTTTAACTTAGGATTAGTCAGTTCTATTTCTTGATAGGGGCAGGGA AACCCAATGtgagtttttctattttgcCTTTGTTGGAACGCCGGCACTCCTACAGCGCagcggaaaaataaaacacccagcgatcctaaccatggatcca - 45609_PtRNAdb chr-4.trna55-Pro-CGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 55 17906745 17906676 Pro CGG 0 0 26.3 12.90 13.40 Inf Pro 42.4 trunc_end:13 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTCGGATGCGAGAAGtCCTGAGTTCGATTCAAAATACTTT 70 >>>.>>>..>>>.........<<<.>>>>>.......<<<<<......>..>.......<<.<<<.<<<. tcaatgtgaagtctataatgtcactaagtcaataaatataatttccaaataattatatgcaatattcgctttagggaatatgccaaaatcttcaaatgca taaaatccTTTTAATAAGAGTTTTGCATAATCAATTAACTACCAAGAACAACTGTCTAGGTCATGTATAGAAACAAGCCTATACTAAATATACCAATAAA - 45610_PtRNAdb chr-4.trna58-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 58 10616128 10616065 Pro TGG 0 0 38.1 18.70 19.40 Inf Pro 65.1 trunc_start:4,trunc_end:4 Phanerogamae -NA- Dicot GTTTGGTCTAGTGGTATGATTCTCGTTTTGGGTGCAAGAGGtCCCGAGTTCGATTCTCGGAACT 64 >>>..>>>.........<<<.>>.>>.......<<.<<.....>>>>>.......<<<<<<<<. ACCAGgctatattttgatttttaaatatatttatgcaTATCTCTAGCTGaaagaataaatcaattattttttttctgcaGAGAAGTACAACCGTCTGGCC tatttttccttttttttttaaattttttggctCAGAGGCGCCGACACGTGGACATATTGGTCAGTGACACAAAAAATTAACGAGGGGCATTCCGAGAATT - 45611_PtRNAdb chr-4.trna59-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 59 7058275 7058205 Leu CAA 0 0 25.9 16.90 9.00 Inf Met 21.4 IPD:-21.40 Phanerogamae -NA- Dicot GGATtAGAGCAATTtGGTAGCTTGCAAGGCTCAAAACCTTGAGGtTATGGGTTCAAATCCTTCTTGAATTA 71 >>>...>>>>.........<<<<.>>>>>.......<<<<<.......>>>.......<<<..<....<<. ACCATTCCGTATACATAGGCTATTCTATTTGTACATATATCGAAGAGGGGCGCATTCAATCTTTGTTTGTCCAttagtttggttttttttttttcattgc GGCAGGCTATGGTTAATTCATAATAAACTGTATACGGCCCAAACAATTAAAAATGGAATCCATTTTATCCTTATGGGCCTATGTTGAAACTAACTGAACC - 45612_PtRNAdb chr-4.trna5-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 5 5747417 5747489 Lys TTT 0 0 91.2 66.90 24.30 Inf Lys 98.4 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGTCGGTAGAGCGCATGGCTTTTAACCATGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAAGAGAGGgcaaaagttgagtttggtTTGGAAATTTTACTCTACTCTAGGTTGGCATACATAAGTGCCGAGGTATAAAACTTTCAACCATAAAATTTAT GAACGGTGGTTGGTTAGTgttccttcttttcttctttgtttatGTTATGATAAAACCCAATAccatcaaataaaacaaatttgataaatggttgatttat + 45613_PtRNAdb chr-4.trna60-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 60 6336537 6336464 Ile AAT 0 0 81.8 58.30 23.50 Inf Ile 106.8 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGTGCAAAAAGCTGGTCATTGATGTGAACGGTCTAGGTTTTACTCATAAACTTTAGTTGGGCCATGTCTTGTATGTAACATGCAAGTTCCTGTCAACAGT tctattttaatttttctttttattttctgcaactctgtaaatttaatttgggcttTTTCTACTGTTTGGACCTCTCTGTCCCAATTGGTTTAGTTTAGTT - 45614_PtRNAdb chr-4.trna61-Arg-CCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 61 5483285 5483213 Arg CCG 0 0 66.4 52.90 13.50 Inf Arg 87.8 Phanerogamae -NA- Dicot GTTCGCGTGGCCTAATGGAtAAGGCGCTCGCCTCCGGAGCGGGAGAtTGTGGGTTCGAGTCCCACCGTGGACG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTTAATAGGGCTAATATGGAATCTAAACCTGATTACCTTGACAAATATTACgcaatgtttattattttaaataataaattgtacCCTCATAGAACAAAGG GtgtctattttaatttacttttaggATTTCGCTTGATTTTGTGATTTTCTCGAATACGGCGGCAGCTTATTTGGCCGCAATTTAAATTccaaaagttaaa - 45615_PtRNAdb chr-4.trna62-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 62 4608616 4608544 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAATTTtcgtaattaaatcaaataaaaaaacgatctatatcaaatttcaacagacttaaagaattttaatttaagcaattgaacaaaataatgtTCAACA TTCCTCTTTTTTACGCCTCCTCGATAATATATTCTGGTCTTTCGATATATCCaataaaaacaacatttttcaCGCGAAATcgatgaattaaataaattat - 45616_PtRNAdb chr-4.trna64-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 64 4017091 4017018 Met CAT 0 0 38.1 19.20 18.90 Inf Thr 45.6 IPD:-45.60 Phanerogamae -NA- Dicot GCATCTATGGCTGAATAGTtAAAACGCCCAACTCATAATTGGAGAATTCATAGGTTTAATTCCTATTGGATGCA 74 >>>>>>>..>.>..........<.<..>>>>.......<<<<.......>>>>>.......<<<<<<<<<<<<. ATGTCCTTTCATTGATTCCTCCTAAATTGCATTGATTTATtctaaatatttcatttcaattggAATTTAGTTATTCACCATGTACGAGGATCCCCGCTAA CGCCAATGGGACCCTCCAATAAGTCTATTGGAATTGACTTTGTATCAATGGAATCTCATCATCTATAGATAATGATTTGGTGTGGTATATTCATATCATA - 45617_PtRNAdb chr-4.trna65-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 65 3845633 3845560 Val AAC 0 0 54.6 31.10 23.50 Inf Val 75.0 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACATCAGTCTAACACACTGAAGGtCTCCGCTTCGTGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. taaatttttatataaatcattCTCGAGACAATTCACATACGTTACGagcttaattattttaaaacttgaatacGGCTTCTGCGACTCATCAAGCGGAAAC TTGTTTCGAAATGGCTAACAACAGCACCAAAAAcagtttgaaaaataaaatcagaaaaatgggtctttaaaacaaaatttagcagaagaaagaaatttga - 45618_PtRNAdb chr-4.trna66-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 66 3723242 3723171 Gly TCC 0 0 63.6 41.20 22.40 Inf Gly 69.1 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtATGATAATTGCCTTCCAAGCAATAGaTCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AAGAATATTATCATAAAGTCTACTTAAGATCGAGTTATTAAGTATTGTAGTtctttatatttagttttagatatttaaaataaaacctcCATACAACCAA GGCAATATTGTTTTAGAACACTTTCAGAAACTTGGTTCAACAAAGTCAAAATCTTATtactttaatcaatttaattccattttacAATCAACTTCaatat - 45619_PtRNAdb chr-4.trna67-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 67 3504725 3504653 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tgttacaaataaataaacttctTTCGAggagaagaaatgaaaaagtaattaacGCTTGTTAAATGTTTAAGTAACTTTATTGTGAATGATGTTTCAACAA TTCTATTTTTTCTTCCTTGCTAACAGCAGTTTTGCTTGTTTTCGCTGGCGAGTGGACGGGCCTTAACTCACCTTTAAACACCTTATAATCCCGATGCAAA - 45620_PtRNAdb chr-4.trna68-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 68 568370 568288 Leu TAA 0 0 70.3 34.60 35.70 Inf Leu 99.2 Phanerogamae -NA- Dicot GCTGGTTTGCCCGAGTGGTtAAGGGGGCAGACTTAAGATCTGCTGCACTGAAGTGCGCGTGAGTTCGAACCTCACAGCCAGCA 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. GCCTTACCTCATATTTTGAGccaaaaaccttttaaattttgggtaggcccattattttgttttatactTAAAACTAATTTAAGGTTAGGCTATCGAATTA gttttttaatttattcccctCAAACAACGTTGAGTTATTTGTAATCAAGGTTCCGATATCTTGTCAAATTATAGCTGAAGCTTTATCAAATAATctcaaa - 45621_PtRNAdb chr-4.trna7-Leu-CAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 7 6074221 6074301 Leu CAG 0 0 69.5 46.80 22.70 Inf Leu 109.7 Phanerogamae -NA- Dicot GTCAAGATGGCCGAGTTGGTctAAGGCGCCAGTTTCAGGTACTGGTccgaaaGGgCATGGGTTCGAATCCCATTCTTGACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. TAGTTGGAAATGTATTGATAAGGCAGTTTCATTAGTAAATAGAGAATAGATGGTCGTCCCATAATaataaatccaataaaaaagaaaaaacaaccaACAC AAGCAAgtccaaacttttttttatcaaattgcaTTTAACGTCCTTATATTACCAATTTGTGTCAGATTAAGTCCAtatgttataatttaatcatttctaa + 45622_PtRNAdb chr-4.trna8-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 8 6178436 6178509 His GTG 0 0 44.9 28.50 16.40 Inf His 51.8 Phanerogamae -NA- Dicot GCGGATGTAGCCAAGTGGAtcAAGGCAGTGGATTGTGAATCCACCATgCACAGGTTCAATTCCCGTCATTCGCC 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<. agaatgatgaCTGATAGAAATCGTTGCAATTTGTATTTGAAATAgttaaacaagtaaaaaaatactaTAGAGTATACTAATTGTAGAGGGGCGTAGAGGG cattttttttaataaatgatttgctacaaaaggatttttttaGTGAAGGCgccattttttttactttaaaaatatatttttttgtttttgtaaagaCGAA + 45623_PtRNAdb chr-4.trna9-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-4 9 6436134 6436209 Met CAT 0 0 49.9 34.70 15.20 Inf Met 62.6 Phanerogamae -NA- Dicot CACGGGATAGAGCAGTTtGGTAGCTCGTAAGGCTCATAACCTTGAGGtCATGGGTTCAAATCTCGTTCCCGcaacA 76 ..>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<..... CCTTTTTACCATTCTGTATAAATAGGCTATTCTATTTGTACATATATGGAAGAGGGGTGCATTCAATCTTTGTTTGTCCAttagtttggttttttttaat ttacatttttttgacaaaaaattagACTTGACCCTATTACTTGAAAATACCCGTTGATTCCTTATTAACGCCATTTCGAACACAACTGGTACATTCCAAA + 45624_PtRNAdb chr-5.trna11-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 11 10283802 10283873 Gln TTG 0 0 73.5 53.70 19.80 Inf Gln 104.8 Phanerogamae -NA- Dicot GGTTCTATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTAGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CAGCTTATGTTACCAAAATGAGTAACTTGTCAGGGTGGGACGATTGATcttttattttaccaaaaattaaatagtataaaatcgagATCAATGGAGGTAA TCGTTTTGACCTTTTTCTTGGAATGTGTGTAATTCCAAGTTATGTTGATTAGATATAAGTAGGATCCAACCAACATCTCCAATAATTTCGAgtgaaattt + 45625_PtRNAdb chr-5.trna13-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 13 15653246 15653317 Pro TGG 0 0 69.2 36.90 32.30 Inf Pro 112.8 Phanerogamae -NA- Dicot GGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAACGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CACTCTCCATACAATAGCATGGTATACCAAGTACTAAAACcccattaaaaattaaagatatagtTCTAAATATAAAAGCTGCATCTCTCGAGCATCGAAT TCTTTCTCATGGAAATATTATTTTCCCGCCTACACTTTTTGGAAGGTCTGTTGCAACACAGAAGCAACTTTCAACATGGATTTTGCCTTTGTGGTATATG + 45626_PtRNAdb chr-5.trna14-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 14 19775569 19775650 Ser TGA 0 0 45.4 25.60 19.80 Inf Ser 77.9 Phanerogamae -NA- Dicot GTCGATATGTCCGGGTGGTtAAGGAGACGGACTTGAAATCTGATGGGCACTGCCCGCGCAGATTCGTACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<..>>>>.......<<<<..>>>>...<<<<..>>>>.........<<<<<<<<<<<. tttggcaATTAGCTAGTCTCCTCTCTCTAAGGTTGGGAATTAAGCTAAGCTTTGGTTGTAACCGATAATATCTTATTCTAGAGTAATTTAGCAACACAAC AATTTCTTGTACTTTTTCTTTGAATGAATTAAGTTAATCTGATGTCTAAAAGACAGGGAAGGAATCTTACCTTGAAGATCAATAGGTTCCTTTTAATTAA + 45627_PtRNAdb chr-5.trna15-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 15 22480165 22480242 Glu CTC 0 0 33.3 23.60 9.70 Inf Glu 39.8 Phanerogamae -NA- Dicot CCGTTGTAGTTTAGTTGGTtAGGATACTCGGCTCTCACCCGAGAGaCTCGGGTTCAAGTTTCGGCAATGttttgcttA 78 .>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<......... taaaatataaataaaaaataatctaaagcCAAAAcataaagataaaaatgaaaaataattaataaatagataaaaataaaaatagtctTACATCATCAAT ttttgttctttttccccATTTTgcttgcttttatttttgtttgtttgtttgtttttctcaTTTTGCTTGCTTACTTTGTTACTGGTATGGGTTTTTGTTA + 45628_PtRNAdb chr-5.trna16-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 16 24540824 24540894 Asp GTC 0 0 35.9 25.10 10.80 Inf Asp 38.0 Phanerogamae -NA- Dicot GTTGTTGTAGTATAGTGGTgAGTATTCCTACCTGTCATGCAGGTACCTGGGTTCGATCCCCGACAATGGTG 71 >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<....>>>>.......<<<<.<<<<<<<. atatttaattatcgAATGATCCATATACACCATCACTTTAGTACCAACaagttaaaatttatcaaaagcaAAGACAATAATAAGTAGTTCTTTTTTAGTT ccaaaaacttgatcggctgtttaacgtcacagtaataatgtgcaagtgtacactgtcgatgcaagtatagaaGACAGATGTGTGTCTGTCAGATATTGAT + 45629_PtRNAdb chr-5.trna17-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 17 25372399 25372470 Arg TCT 0 0 40.3 16.20 24.10 Inf Gln 40.9 IPD:-7.80 Phanerogamae -NA- Dicot GCGTCCATTGTCTAATGGAtAGAACAAAGGTCTTCTAAACCTTTGaTATAGGTTCAATTACTATTGGACGCA 72 >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>.........<<<<<<<<<<<. acaattttttcacatgttctttagttttttcaaccaagagaaaagaaaagaaaactgaaCAAGAGAAAAAAGTCCAAATGTCAAAAAATCATAATGAAAA ATTTAGAATCAATTTCTCTATATtccattaagttaaaattttctatttataactGTTCCTGAAGTCGAAAACGTTCCATTTGTTCCTAAATAGTGTCTTT + 45630_PtRNAdb chr-5.trna19-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 19 35896093 35896168 Cys GCA 0 0 35.3 18.10 17.20 Inf Cys 37.6 Phanerogamae -NA- Dicot GGCGACATGGCCAAGCAGTAAGGCGGGGACTGCAAATCCCtTATtCCCCAGTTCAAATCCGGGTGTCGattgaTCA 76 >>>>>>>..>>>.........<<<.>>>>.......<<<..<....>>>.>.......<.<<<<<<<<.....<<. AATATTTGGGGAGATACTATAACTAATTGAAGGTATGGATCcgatctaaaaatgaaaaagaaaagggagatactttccttttttttgtttgtagcCTTTT ACAAAAAACTCGAAATCCTAACGTCTCCTAACATCTAGGATTCATGGAAAAACTAAAGTAGTGGAAGGGAATCAATAAATCTTGATATGGGAGCCCCCTT + 45631_PtRNAdb chr-5.trna20-Val-GAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 20 37145799 37145869 Val GAC 0 0 31.9 10.50 21.40 Inf Cys 24.9 IPD:-30.70 Phanerogamae -NA- Dicot AGGGATATAACTTAGCGGTAAAGTGTCACCTTGACGTGGCaGAAGTATTAGTTCGAGCCTGATTATCTTTA 71 >>>>>>>..>>>>.......<<<<.>>.>>.......<<..<<...>>>>>.......<<<<<<<<<<<<. cTTTAGGGATACCCCTTTTTTAAATAAGAGTTTGCATTGTTGAGTTTCCCGATCCTTTGGCTTAGGATTAGTCAGTTCCATTTCTTGATGGGGGCAGGGA AACCCAATGtgagtttttctattttgtctTGTCCCAGCTGTGattgtttaaaaacaataaaaattattttatatttaaatttaattattaaaaataatgt + 45632_PtRNAdb chr-5.trna21-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 21 49260616 49260689 Trp CCA 0 0 60.3 35.20 25.10 Inf Thr 66.7 IPD:-14.10 Phanerogamae -NA- Dicot GCGCTCTTAGTTCAGTTcAGTAGAACGTGGGTCTCCAAAACCTAATGtCGTAGGTTCAAATCCTACAGAGCGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ataacttgaaatttagagaTAGTATAGTTGTGCGCCATGTATTGgggttataaaataaaagaatcctCTTTTTTACAGTCTTATTTATTATGATAAGAAA ATTCCGCTCTTGTTAGGTCGAAAATTACAccaaactgaaaaaaaaattgaacagcAATTTGAATTTGACCTCctaggattaaattattaaattcaaatta + 45633_PtRNAdb chr-5.trna24-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 24 49863761 49863824 Asn GTT 0 0 21.6 10.40 11.20 Inf Cys 32.1 IPD:-21.50 Phanerogamae -NA- Dicot GTAGCTCAGCAATAGAGCAGTCGATTGTTAACTGACTGGtCGTAGGTTCGAATCCTAgCagtCG 64 >..>>>>.......<<<<.>>>>.........<<<<.....>>>>>.......<<<<.<...<. AAGAAGTTCTAGGGGTTACGAAGGAAACTTCGAGTTCATAGTGGTTATAGTTGAGAACAGGAATTGAACTCTATGAGATTTAATCTCTCGTTGCTTCTCA ATTGTTAACTGACTGGTTGTAGGTTCGAATCCTACTTGAGgagatttgattcattctgaatTAAAGAATTTAGAATGTCAGAATGAAAGGGTTCGCTTTG + 45634_PtRNAdb chr-5.trna25-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 25 49881164 49881237 His GTG 0 0 40.8 27.90 12.90 Inf His 50.1 Phanerogamae -NA- Dicot GCGGATGTAGCCAAGTGGAtgAAGGCAGTGGATTGTGAATCCACCATgTGCGGGTTCAATTCTCGTCGTTCGCC 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aaagaatgatgACTGATAGAAATAGAAATCGTTGCAATTTGTATCTGAAATATTTAAACAAGTAAACAAAAATACTATAGAGTATAGTAATTGTATGGTG catgtcatttttttaataaatgatttgctacaaaaggattttttttagtgaacgtgccattttttttactttaaaaatatatatatttttgtaaatttgt + 45635_PtRNAdb chr-5.trna28-Leu-CAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 28 58733028 58733108 Leu CAG 0 0 69.5 46.80 22.70 Inf Leu 109.7 Phanerogamae -NA- Dicot GTCAAGATGGCCGAGTTGGTctAAGGCGCCAGTTTCAGGTACTGGTccgaaaGGgCATGGGTTCGAATCCCATTCTTGACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. TACGAAATACCAAGTCCAGTTACCTATCGGCTATTTACTTCCTTTTCcgaaaaaaggttaaaaacatACAAGTTAGTTGTAAGCAAGACATTGGACCCAA aatttttttatctcttgACCACAAGAATAACACTTACCTTTATTGGCTGAGTGACTACATGTAGTGACAAGTACTTCActtcattattcaattaaattag + 45636_PtRNAdb chr-5.trna29-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 29 60326888 60326961 Val CAC 0 0 73.7 53.80 19.90 Inf Val 96.6 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCGAACCCGGGCTCAGTCA 74 >.>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<.<. ACCAGATCAAGACAATGCTGCCAATTACGCACATGGCGGTACGATATTGCTAAAATAATACATAGGTATCCGGTGACAGTAACATCAGCTAATTGAATGG GAACTTACATTTTTCAACCATTTTCTCGGTTTTGCAACTTATGAAACCAAAGAGACGAAAGATATATGGTAGCTGAGAAAATGCCAACAGTGTAAGCCAT + 45637_PtRNAdb chr-5.trna30-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 30 60330934 60331007 Val CAC 0 0 82.4 54.40 28.00 Inf Val 103.7 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCGAACCCGGGCTCAGACA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTGCTTCATCAACGCTGAATCTCTTTCTTACCGTCCATAACATCTCTGCCTTGGTTAGCTTTACAAATGTCAAACAATATATACCTTTTTAATAATATCC ATggcattttttttcaattttcataaggAACATCAAAGAAGGGCAGGAAAGATACGGTGGGCTTTATTTTCATTGAAGATACGATGTTAAGATAATGTCA + 45638_PtRNAdb chr-5.trna31-Pro-CGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 31 61350428 61350499 Pro CGG 0 0 68.4 35.70 32.70 Inf Pro 111.1 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TATTGGGACTTTGAGGGCACGAGGTtcaattatcaataataattagcATTTGTAGGGTGTGTCTCTAAACCAAATGGTGAAAGCTGACGAGCAACTCGGT TCAACCTTTTTGCTTACTCCCTTTGTAGTTTCTGTCATACAGTTTGTATTATGGACCCCAACATGATCTGCTTTTCAAGCATTGAAattgctaattttaa + 45639_PtRNAdb chr-5.trna32-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 32 61350954 61351025 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTAGTTTACCCTAAATCTGAAAACAAAAAGCTAGAAGGGAAGCTCACTTGGTTAATAGACTATGATAATTAGTGAAAACAAATAACGAGCTTCCAGAAGC ccatttggtttttatttataataaccCTATAACACAGTAACTTCATATCCACTTGTTTTCCTTACAGGATTTCTAAGCTGTAAAAAATGGTGCATTTTTT + 45640_PtRNAdb chr-5.trna33-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 33 61351896 61351967 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gaattaaattagcGTCTAAAAAGTTCACAAGTCATCATTTAGCGGGAACTTGATCATAAGAACAAGGAACTATTAACGATCACAGCAAATAGCAGAAGGC CATGTTTTTTTTCCCCAAGTTTTAGAATCTGTAATAATTGATGATCATAATTCATAATCCAACCTCAAGTCAACTTCAATTAAGAGTATAATAATGTAGA + 45641_PtRNAdb chr-5.trna34-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 34 62421418 62421489 Gln CTG 0 0 65.5 47.10 18.40 Inf Gln 95.2 Phanerogamae -NA- Dicot GATTCCATGGTCTAGTGGTcAGGACATTGGACTCTGAATCCAGTAaCCCGAGTTCAAATCTCGGTGGAACCT 72 >.>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<.<. AGGTGCGGTGGTTGAAGGATATACGGCGGCGGATGGGGGAGGTTAGATTGGAAAACGTTACTTTCCtttattatcataaataaatactGTGACATCAGAT CTTATctccttattttttaaaaaattgtcaattCTAATTGTTATTAACGGATCTTTCAATGGAATCCATGTTTGTCTGTTTATCTCCTTTGTATCTTTCA + 45642_PtRNAdb chr-5.trna35-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 35 63688986 63688903 Leu CAA 0 0 79.7 53.90 25.80 Inf Leu 126.5 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAAGGCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. ttattaatgaatataaaaatgaGATCACAGATGGCggtaaacaaagaaaaaaaatttatgaaattatctTATAGAATAATTTACAGGTCTTGTTCATCAA GCTTTTGCGTTTTTGCAGCAAGTCTAACTTACTAAGCCACTACACTAATTTTTGACTGCATGTTTTTTTGCCACTGCACCACCACCTTGACATCTAATTA - 45643_PtRNAdb chr-5.trna36-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 36 63131614 63131541 Thr AGT 0 0 75.3 47.40 27.90 Inf Thr 89.8 Phanerogamae -NA- Dicot GCTCTTGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACAAGAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCAAacacaaataaacatataatatttcCAATTTAGGAGAGATGGGTATTAATAccacaataattaaataattacccaactttttttctctttatcaTCA AGAGCATTCTTTATTCAAGATATATagtggtaatttttttttttttgtgaaaaatgaaataatggGCAATGTTAATTCTAGAAATGCTGTAACAGGTGGT - 45644_PtRNAdb chr-5.trna37-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 37 62676159 62676087 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTCCCTCTCGTCTTTATTTGCTGCTGTGGTCACCACCACTCATCGTGGCcgggtttttgtttttaaatttatatttaaaatattaaaaagttgtCAGCTT GATACATTTTTCTTAGCTCTTTGCGTTATTTCCAGTCCCTATACTCTTTGGATTTTGAAAGTTTAGTCCCCacacttttaatttcaatttaaaatttcaa - 45645_PtRNAdb chr-5.trna38-Arg-TCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 38 62258405 62258332 Arg TCG 0 0 81.9 60.40 21.50 Inf Arg 92.9 Phanerogamae -NA- Dicot GACCGCATAGCGCAGTGGAttAGCGCGTCTGACTTCGGATCAGAAGGtCGTGGGTTCGACTCCCACTGTGGTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCATGTACCAAATTGAACAGTGGGTATCAAAGTAGATCTACAAACACGTCAAAATGTATAACCATGAAATATATCTATGATCATCATATGACCCATTCAA CTActtttttggttatttatttcCAGGCCCAAATCTGCtgcttttttaatatattgtttggacttgggtttttgttttagtttccAACCTATGTCTTCAT - 45646_PtRNAdb chr-5.trna39-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 39 60181474 60181389 Met CAT 60181436 60181425 64.2 40.70 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>.....................<<<<.....>>>>>.......<<<<<<<<<<<<. tgataaatttccCTATTAAGCTCTGATGCTACTACTTTGTATTTAAAATCTTGCGAATcgatatatattttaaattactatGACAAGATTTACCAACGGC AAAAGActccttttttttagttttgactCCATGCTAATGATTTAATAACCCAATTAAGGGCAAAGGGGTGGCAAACGTGGAGGCCTACGGGCCGTCCATT - 45647_PtRNAdb chr-5.trna3-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 3 3593595 3593687 Ser TGA 0 0 21.9 12.10 9.80 Inf Ser 21.7 Phanerogamae -NA- Dicot AGAGAGATGGCTGAGTGGTtgATAGCTCCGGTTTTGAAAATCGGTATAGTTCGAAAcataGAATTATCGAAGGTTTGAATTCCTCTCTCTCCT 93 .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.>>>>>>>........<<<<<<<.>>.>>.......<<.<<<<<<<<.. GTCAAGggatttgaaaatagttattccaaaaattgttttaaaggcaaaaagaagaagaaaaacattAAGACCAACTCGAGCCCGGCAAAATTTAGCTTTC TTGCTCGATGAATAGGTTTGTAATTAATTGGATTTGGCCACAGCTGTACTGAGATCGATTCCACtaaaaattgatgatttaattggtttaattgCCAATT + 45648_PtRNAdb chr-5.trna41-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 41 57932641 57932569 Phe GAA 0 0 76.1 54.40 21.70 Inf Phe 115.3 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCACGTGTTCGATCCACGTTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. CTTGTGAGTAAGAccacgaaatttttataatcttcGATTATACTAACCACCAACACTGAATAACAggaagaatatatatataagttttacgACATCAATT TTGTTTTTGGGCTCTCTTTTAATGGACTCGTTCTCTGCTTACTTTTAATGGGCAAATAAAAACAAGGCTCAGTTTCAGTGGAGCTCTGTCTGCccatcaa - 45649_PtRNAdb chr-5.trna42-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 42 57671203 57671128 Phe GAA 0 0 21.3 13.20 8.10 Inf Phe 25.3 Phanerogamae -NA- Dicot ATTATgggGATAGCTCAATTGGAAGAGCATTAGATTGAATATTTGAAGGtTGCATGTTTGATCAATGTTTATAGTA 76 >>>>>...>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. TTTTCATCTTCAAATCTCGACTATTAAACAACAATTTAATGGAGTTGAAATACTATCGagagttaagaaataaataaactcttTCTAAAACTACAATACA AGACCTTTTAGATGATATTCTTGGAATAGACAATCATGGATAGAGGTGATAATGGGTGGACACGAATtagattgtttttaaattttgattattttgagtt - 45650_PtRNAdb chr-5.trna43-Pro-CGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 43 55422548 55422479 Pro CGG 0 0 29.8 12.80 17.00 Inf Pro 53.2 trunc_end:13 Phanerogamae -NA- Dicot AGGCATTTGGTCTAGTGGTATGATTCTTGCTTCGGGTGCAAGAGGtCCTGAGTTCAATTCAAAATACTTT 70 >>>.>>>..>>>.........<<<.>>>>>.......<<<<<......>..>.......<<.<<<.<<<. tcaatctgaagtctataatgccactaagtcaataaatatattttctaaataattatatgtaatattcacttcagggaatatgccaaaatcttcaaatgca taaaacccTTTTAACAAGAGTTCTGCATAAtcaattaactataaaaaaaataactgcCTATTTCATATATAGAAACAAGCATATATTAAGTATATCAATA - 45651_PtRNAdb chr-5.trna44-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 44 54772571 54772499 Phe GAA 0 0 53.0 37.20 15.80 Inf Tyr 59.4 IPD:-1.40 Phanerogamae -NA- Dicot GTCAGGATAGCTCAATTGGTAGAGCAGAAGACTGAAAGTCCTCATGtCACCAGTTCAAATCTGGTTCCTGGCA 73 >>>>>>>..>>>>........<<<<.>>.>>.......<<.<<.....>>>>>.......<<<<<<<<<<<<. AGTTCAagacttttaatttaatacttttttttcatttttaattgacaTAGACCCAAGTCACCAAGTCATCTAGTATTATGAGGATAATGCGTCGGTAATG TATGATTAATTTGTATGAGTATCGACTCTACAAATTAATTGATATGGATCGACATAATACATACTTATCTTGCTAGGTATCTGAAATTAAACcctctctt - 45652_PtRNAdb chr-5.trna45-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 45 54611750 54611677 Ile AAT 0 0 82.4 58.90 23.50 Inf Ile 107.0 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAAACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. attatttaaatacaccATGTCCATACACAATTTCCGATCCAAATTGCTTGACGGTTTTGTAACtgctaaatatattaattacaacGTGTTGATATCAACA tttgattttctttttctttgggctttgtgttttctttttgctAACATTTCGGGCTTTCGCTAATTCTTGGACTCTTCCCCGCCCCCTTATttaacaacat - 45653_PtRNAdb chr-5.trna46-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 46 53344646 53344573 Thr AGT 0 0 53.7 33.90 19.80 Inf Thr 63.0 Phanerogamae -NA- Dicot GCTTTCATAGCTCGGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAATTCGACTCTCATTGAAAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<......>>>.........<<<.<<<<<<<. ACCGATTCTCCTCTTCCGGTATTTTTCTCCCTTGTCTGTGCTTACTTAGCTTGCATGCAGCTTATGTCTTCATATGCTTAAAATTAGATGCTGTTCTGTA TTTTTTGAGTCCTGGTGTGCTCATATTTCAACTATGAACCAAatgtttcttttatatgtaaaaatattgcTGCTTTGCTGCTCTAATTTGTTTCTATTAA - 45654_PtRNAdb chr-5.trna48-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 48 49883420 49883347 Leu CAA 0 0 58.9 34.70 24.20 Inf Thr 65.7 IPD:-24.00 Phanerogamae -NA- Dicot GCATCCATGGCTGAATGGTtAAAGCGCCCAACTCAAAATTGGtGAATTCGTAGGTTCAATTCCTATTGGATGCA 74 >>>>>>>..>>>..........<<<.>>>>>.......<<<<.<.....>>>>>.......<<<<<<<<<<<<. ATGTCCTTTCATTGATTCCTCCTAAATTGCATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTACGAGGATCCCCGCTAA TGCCAATGGGACCCTCCAATAAGTCTATTGGAATTGGCTTTGTATCAATGGAATCTTATCACCTATACATAACAAATTGGTGTGGTATATTCATATCATA - 45655_PtRNAdb chr-5.trna49-Val-GAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 49 49872377 49872306 Val GAC 0 0 46.7 11.10 35.60 Inf Ala 43.6 IPD:-37.90 Phanerogamae -NA- Dicot AGGGATATAACTCAACGGTAGAGTGCCATCTTGACGTGGTTGAAGtCATCAGTTCGAGCCTGATTATCTCTA 72 >>>>>>>..>>>>.......<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<. GAAAGCCTAGCTCTAAGTTGTTTAAGAATAGTGGCGTTGTTGAGTTTCTCGATCCTTTGACTTAGGATTAGTCAGTTCTATTTCTTGATAGGGCCAGGGA AACCCAATGtgagtttttctattttgcGTTTCCCTCTGTCATGATCGAATAAGAATGGATAAGAGGCTCGTGGGATTGACATGAGGGGGTAGGGATGGCT - 45656_PtRNAdb chr-5.trna4-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 4 3664334 3664426 Ser TGA 3664372 3664387 30.0 23.80 6.20 Inf Thr 26.0 IPD:-11.90 Phanerogamae -NA- Dicot GGAGAGATAGCTGAGTGGTtgATAGCTCTAGTTTTGAAAACAaAGAATTAtTGAAGGTTTGAATCCCTCTCTCTCCT 77 >>>>>>>..>>>>.........<<<<.>>.>>.......................<<..<<.......>>.>>.......<<.<<<<<<<<<. atttgagtatttaaactaattttttcctCACATTGGCATCCCCATTAGTTATCCCTTAGTCTGATTTggtggaataaaaataaaatagaaattagcTTTC TTGCTCGAtgaatatatttctttctttattgcTTTTTCCTAACTTCTTAATTAAGaatcttaatattaataaaaggtAATGGCTCGGCAGGGTGGAATAG + 45657_PtRNAdb chr-5.trna51-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 51 49284547 49284476 Cys GCA 0 0 39.7 33.70 6.00 Inf Cys 42.2 Phanerogamae -NA- Dicot GGCGACATGGTCGAGCGGTAAGGCGGGGGATTGCAAATCCCCTATTCCCTAGTTCAAATCCAAGTGTCACCT 72 >>.>>>>..>>>.........<<<.>>>>>.......<<<<<.....>.>.>.......<.<.<<<<<.<<. GTATGTCTTGAGATACTATAACCAATTGAAGGTATGGATCcgatttaaaaatgaaaaagaaaagggagatactttcccttttttttgttGGTAGCCTTTT GATCAACAAAAAACTTGAAATCCTAACGTCTCCTAACGTCTAGGATtcaaggaaaaactaaagtagTGGAAGGGAATCAGTAAATCTTGATATGGGAGCC - 45658_PtRNAdb chr-5.trna52-Thr-GGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 52 49280464 49280393 Thr GGT 0 0 42.4 21.70 20.70 Inf Thr 58.1 Phanerogamae -NA- Dicot GCTTTTTTAACTCAATGGTAGAGTAACGCCATGGTAAGGCGTAAGtCATCGGTTCAAATCTGATAAGGGGCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATTCCTGAGAGCTACTAGCCACTATGAGTCTATtacatatacttatatatataaatagatctTATCCATCTACTGAATCATTCagtaattgaatcaaatt tttgacttcttctttttcataaaaCTCCTATGAAATGGTAGTATTCATATTGAAACATTGGGATGTTGTTTTTACTAGTAATAAAAACCCAACTCTATAT - 45659_PtRNAdb chr-5.trna54-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 54 46956922 46956849 Trp CCA 0 0 48.1 23.40 24.70 Inf Thr 57.8 IPD:-14.80 Phanerogamae -NA- Dicot ACGCTCTTAGTTCAGTTcGATAGAACGTGGGTCTCCAAAACCTAATGtCATGGGTTTAAATCCTATAGAGCGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTTCTCATATGATATATGATAGTACAGTTTCGCATGATGTATTGgggttgtaaaataaaaaaatcatcttttTTACAGTCTTATTTATTATGATAAGAAA ATTCcgtaaatttaagtttttagtattgttttcaaaaagtacttttgagaaataaaatgtccattttaaatatgatattataaagtaataaatatgcaTT - 45660_PtRNAdb chr-5.trna55-Thr-CGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 55 39509075 39509004 Thr CGT 0 0 82.2 57.60 24.60 Inf Thr 90.2 Phanerogamae -NA- Dicot GCCTCCGTAGCATAGTGGTAGTGCGTTCGCTTCGTAAGCGAAAGGtCGCGAGTTCGATCCTCGCCGGGGGCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AACGAAAAGAATATGAACTTAAACATTATTCACagcaaaacaaacaaaattcaaCCATATAGGCCTACTTAGAATTAGTAATGACAGATGCATCACAACT taaattttaaattttatatcagTTTCAACTAAAAGCAGTCACGCAACGTTGCCAGAGAATCTGAGGGCATTAATTGCTTTGTcctttttcccttgttttg - 45661_PtRNAdb chr-5.trna56-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 56 12851873 12851801 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GTAGCTTTCCATTATGATCAGCCACGTCCAATATTGtgcttttatgttttaaaacttGTCTATATTctatgaatataatatataaattaagaagCCAACT AGCTTTTTTTGATTAAACTGGGGCTTAACATCTTGGTCCTTAAATAAAATCCAAgtaacctaaaaataaaaagacataaGCCGAAAAGCCCAAAGAAAAA - 45662_PtRNAdb chr-5.trna57-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 57 12578783 12578711 Arg TCT 0 0 70.2 50.00 20.20 Inf Arg 95.6 Phanerogamae -NA- Dicot GCACCTGTGGCCTAATGGAtAAGGCGTCTGACTTCTAATCAGACGAtTGTGGGTTCGAGTCCCACCAGGTGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CCTAGCTAagaaaactaatataaaatagaaattaacatCAACAAGCGTCTGTAGCTTCAGCTAttctatatataatatattaacaaaataatttctaagA TGtcggtttttttcttttccatttgcATGAAACCATGCCTTAAACCCATAAAACCGCGGCaatgcattttattttatttcattttattcctTCCCTCGAA - 45663_PtRNAdb chr-5.trna58-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 58 12198945 12198862 Tyr GTA 0 0 33.7 24.70 9.00 Inf Tyr 50.2 Phanerogamae -NA- Dicot GGGTCAATGCCCAAGCGGTtaATGGGGACTGACTGTAAATTCGTTGGCAATATGtCTaCGCTGGTTCAAATCCAGCTCGGCCCA 84 >>>>>.>..>>>>.........<<<<.>>.>>.......<<.<<..>>>...<<.<...>>>>>.......<<<<<<.<<<<<. gataaaataaaaaaaactttccaTTTTAGGGAGACTAGGTAAGGTACTACGAAAGGAAGTTGATCATGGATTATCAATAAGCCTAGAATTGATTCTTCCT ATAATTTGTTGATCTGCCATAACCtaaaatgtccatttttttgtattttgttttctcGAAAagccaaacaaaaaaatagggAAGAATAAAAAAGTCCAAT - 45664_PtRNAdb chr-5.trna59-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 59 8083648 8083576 Val TAC 0 0 65.5 39.20 26.30 Inf Val 83.5 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTTAGTCTTACACACTAAAGGtCCCCCGTTCAATCCTGGGTAGCAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<<<<<. ataccaaatagtatattaacccTCTTTCATTCATTATCATGTGACttcttaaataaatctaaacataattacaattaaattccaattttaaaatcaatag tatatattttttctaggtccttttcaagaaattaaaccctaaaaccttaaacaattaaaaacctaataccctaatttaaattttcttaaaccCTAATCAA - 45665_PtRNAdb chr-5.trna5-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 5 4982950 4983023 Pro TGG 0 0 47.5 30.60 16.90 Inf Trp 53.5 IPD:-8.30 Phanerogamae -NA- Dicot AGGTATGTAGCGTAGCTtGGTAGCGCGTTTGTTTTGGGTACAAAATGtCACGGGTTCAAATCCTGTCATCCCTA 74 >>>.>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<. AAGAGGAAATAGAAAGATCCTTTTTGTATATCAATAGATGAAATAAGGGTGTGGAAAACAAGATAGGGATTATCTACAATGACATTGTAGGCCAATTGAA CCTATAACCAATAAACCTCtccaaataatttttaaaagagtgtCACAAAATAACCACAACAACACAACAAAGCTCTCATAAAGACACCCAAAAACTGCTC + 45666_PtRNAdb chr-5.trna60-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 60 7048423 7048352 His GTG 0 0 63.0 33.70 29.30 Inf His 86.8 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCCACGTTGTGGCCGTGGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. attggaaGTTTGGGTTGAACTATATACCAGCTTAGCATCACAAAAACAAGATTCAAAAGTTAATCtataattaacttaatataTAACAATTACCAAGCAT tctttatatttttttaaaagcacaTGTTTCACGTGCTTGAATTGAATGGCTTATACTTTGAGAATAAGACTTTAAGACcacctttaatttaaaaatttac - 45667_PtRNAdb chr-5.trna61-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 61 5419245 5419162 Ser AGA 0 0 71.4 37.20 34.20 Inf Ser 100.7 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTgTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 84 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. aaaaaatagtaaataaataacataacacaaaaagaaaaacaaattataaaaacctATTACTGATACACAATGTAAGTAAAGGAGAACCACCGTCACCGGT CTTTACTTTTTATTTCCAAACCTCTtcaatgtttatatttaattatggtaatattaagtaaattgttttagctctttttaaaaaataatttttaatttca - 45668_PtRNAdb chr-5.trna62-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 62 5418699 5418618 Ser AGA 0 0 77.1 42.80 34.30 Inf Ser 110.5 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. tgaaaaaaataattattattattataaaattccATATAGCAAATATCTGAAGAATTTTTACAAGATATTAAATAGATAAAGAAGAACCATCTCCACCAAT catttgttttcttttacaaatctGTTCAATAAATGGgataaatcattaatttatgtaaaaaatgggtaaactataaaaatggtcACTACATTATTGCATT - 45669_PtRNAdb chr-5.trna63-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 63 5410208 5410127 Ser AGA 0 0 77.1 42.80 34.30 Inf Ser 110.5 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. agcacaaaaacaaaaacaaattataaaaccCCATTACTGATACACCATATAGTAAATATCTGAAAGACTTTTACTGAGGtattaaatacatataaaagaa aatttttcttgttttaatcCTCTTCAATATGTTTATGGTAACATTAAGTAAATTGTTTTAgctctttttaaaattttattaataattttttaaaaaaatt - 45670_PtRNAdb chr-5.trna64-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 64 5385654 5385573 Ser AGA 0 0 68.5 34.30 34.20 Inf Ser 102.6 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGCTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. agcacaaaaacaaaaacaaattataaaaccCCATTACTGATACACCATATAGTAAATATCTCAAAGATTTTTACCGTGGTATTAAATACGTAAAGAAGAA CAtttgtttcttgttttaatcctctttaatatttttatggtaacattaagtaaattgttttagctctttttaaaatttaattaatattttttttaaaaaa - 45671_PtRNAdb chr-5.trna66-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 66 2753356 2753263 Tyr GTA 2753319 2753299 71.9 38.60 33.30 Inf Tyr 110.0 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCACTGGTTCGAATCCGGTAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>............................<<<<<.....>>>>>.......<<<<<<<<<<<<. tttttctttatgTCAATGTAGAAactaaaatgaatgaaaaagagTTTACTCTGACAgaatttaaactattaaaaatacaCGTTAAAAGCACTAATCAAAT atatttttgttcatttgaacAATTCAACATTTTTCGCATTTGCTTTTTTCTCTGATCAAAACAAGTGTGGAAAGAAGACTTCATTAGgcaaaaattttgt - 45672_PtRNAdb chr-5.trna67-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 67 2752226 2752133 Tyr GTA 2752189 2752169 71.9 38.60 33.30 Inf Tyr 110.0 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCACTGGTTCGAATCCGGTAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>............................<<<<<.....>>>>>.......<<<<<<<<<<<<. ATATGAGATTTAATTAGAAACTAAAATGTGATGTAAAAGAGTTTATTATACTTGACAGAAcatatctatttaaaatttatgttaagtCAAACAATCAATT ttgtttttcctttcttcccATTCAACATTTTCGCATTTGCATTTTTCTCTGATCAAAACAAATGTGGAAAGAAGACTTCATGGGGCAAAGActttttgtt - 45673_PtRNAdb chr-5.trna68-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 68 2750926 2750769 Tyr GTA 2750889 2750805 52.9 37.60 15.30 Inf Tyr 92.1 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGATGACTGTAGATCCTTAGGtCACTGGTTCGAATCCCGTAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>.>>............................................................................................<<.<<.....>>.>>.......<<.<<<<<<<<<. AACGATGCATTAACTGAGTAATGCCCAAGGATTATCAGGATTAATTATGCTTTATAAAatgtaaactattaaaattaaactttaaagcATTTTAAACAAA taatttttccattttttattcaactttttttgtatttgctTTTTCAATATTTCTCTTTTTGATATATTGTTTTCTCTAATCAAAACAAAAGTGGAAGAAG - 45674_PtRNAdb chr-5.trna69-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 69 129762 129669 Tyr GTA 129725 129705 71.9 38.60 33.30 Inf Tyr 110.0 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCACTGGTTCGAATCCGGTAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>............................<<<<<.....>>>>>.......<<<<<<<<<<<<. GTAGACACGGAAGTGGTTGGTGAAGACTGAAGAGCGAGAAATAGGGTTGTATTGGATTTTACTTTGAATAAAACAGTTTTTTTTATGAAGGTGATGTGAT TTAggtttttgcatttttattttttttgccttCTTCCAAGTCTTTCCTTGGCAATGacacaaacaataaataacAATCCATTTGATCgccttgtatttat - 45675_PtRNAdb chr-5.trna6-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 6 5617996 5618077 Ser AGA 0 0 77.1 42.80 34.30 Inf Ser 110.5 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. ccttttcttctttctttctatttaaacttaatttattgtTAACATGTATACTCATTTTTCCAAACATTTAGAGGGATGACATTCCATTATAATCGTCAAT TACTTGTTTCTTGTTTGTAATCCCCTTCAATATTTATACGGTAAGTAAATTGTTTTAgctctttttaaaaattattaaaaggtGGACAAATGGTCACTAC + 45676_PtRNAdb chr-5.trna70-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 70 124834 124741 Tyr GTA 124797 124777 74.2 42.60 31.60 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>............................<<<<<.....>>>>>.......<<<<<<<<<<<<. TTGAGCCTCGGGCGAAGAGTGAAAAATAGGGTTGTGTGGGaatttgcttttaaattttgataatataataaaatgtgaCTTCTTACCGCAAAGTTGCAAT TtccattaaaacattattttgtttttggtgaAAATACCTCTCCAGTCCCTAGCAATTTCGATACAGATCAAGTTGgtcttttccaaaattttaaaacatc - 45677_PtRNAdb chr-5.trna7-Ser-GGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 7 7648967 7649053 Ser GGA 0 0 53.6 32.90 20.70 Inf Ser 65.0 Phanerogamae -NA- Dicot GGAGAGATGGTCGAGTGGTtcAAGGCGTAGCATTGGAACTGCTATGTAGACTcTTGTTtACCAAGGGTTCGAATCCCTCTCTTTCCA 87 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<....<<..>>>>.......<<<<.<<<<<<<. gcAAGTTTCCTTATTAGAATTGATATTGTTCGTACCTATTGAACAATCTAATATGAATAACTCGCTATTCGCTCGGGGTATCAACCATAATAATTATGTA CATTACCTTCACCTAATTCGTCAATGTAACTGACTACAatgtatcaaatcaaataaGAACATACACTAAAGAACTGCTATGTAGACTCTTGTTTACCAAG + 45678_PtRNAdb chr-5.trna8-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-5 8 8086891 8086963 Val TAC 0 0 55.7 28.20 27.50 Inf Val 77.2 Phanerogamae -NA- Dicot GTTGTTGTTGTGTAGTGGTtATCACGTTAGTCTTACACACTAAAGGtCCCTAGTTCAATCTTGGGTAGCAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ataccaaatagtatattaatCCTCTTTCATTCATTATCATGTGACttcttaaataaatctaaacataattacaattaaattccaattttaaaatcaatag tatatatttttttcaatttttttcaaaaattaaaccctaaaaccctaaataattaaaaacataataccctaatttaaaatttcctaaACCCTAATCAAAC + 45679_PtRNAdb chr-6.trna10-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 10 6245118 6245190 Ala AGC 0 0 37.0 19.30 17.70 Inf Ala 80.9 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGTGCTCGCTTAGCATGTGAGAGGtATAGGGATTGATACCTTGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGGAAAGAGATTTCTATAAACTTGcaccaaaaggaaaaaaacttaaggcaattttgtttttgagtAATGAACTATAAAAGTGAAAATAGTACAAGCAAA atttttgttggtttttttttccatatgttaatgaataataaacacctaaattttataatgtttactGAAAGAGATGCAcctaataactaaattaaaatca + 45680_PtRNAdb chr-6.trna11-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 11 6249065 6249137 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAGGAAAGAGATTTCTATAAACTTGCGCCAAAAGGAAAAAAGCTTGAGGCAATTTCTTTTCTACGTAATAAATCAGAAAAGTGAAAAGGTTACACTGAAG CTTTTTGTTTCCTTTAGCTTTTTTAACATGTTTCTATTCCCCATTTGCATTGGTGATGTAGCAGAGTTTCTATGAAACACACCTCTGCTAAATCAACTGT + 45681_PtRNAdb chr-6.trna12-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 12 6266833 6266904 Ala AGC 0 0 47.0 24.00 23.00 Inf Ala 75.2 trunc_start:1 Phanerogamae -NA- Dicot GGGATGTAGCTCAGATAGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 72 >>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. ttaatgaaAGTTTAGAATATGCCGGGATAAAAGCGATTTCTATAAACTTGGGCCAATTTTGTTCTaatgattaataaaaatgaaaactagCGTGTCCGTC CTTTTTgtttatcttttcattttcaaacaagCTTGCAGCCTCTGCTCAGTGCGATGAGAATATTCTCTTCAAATAGTTGAGTGAGACTCTGTTTCCCCTa + 45682_PtRNAdb chr-6.trna13-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 13 11958215 11958305 Ser TGA 0 0 26.7 13.60 13.10 Inf Ser 33.5 trunc_start:12 Phanerogamae -NA- Dicot TACcAGCAaTGTCGAttttccgcGTGGTtAACGAGACAGACTTGAAATCTGTTGGacTGCGgCCGCGCAAGTTCGAACCCTGCTGCCGTAG 91 >>>..>>>...>>>.................<<<.>>>>>.......<<<<<.>>..>><<.<<..>>>.>.......<.<<<<<<.<<<. ACTCCATTACGATACGTAGGCATAACGCAATTCCCACTTGGCGTTATGATGAATTAATtcttgaaataaatataaaatactttgATTAGAAGAACCTGAA tttgcttttctttttcttgatccCATCTTCTAATTTAGCTGAGTTAAGACTAGATttgatcatgggtcgggccgtCCTGAATGTAGGAGGGTGTTGGCAA + 45683_PtRNAdb chr-6.trna14-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 14 12260748 12260829 Ser TGA 0 0 75.2 40.50 34.70 Inf Ser 114.4 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTTGAAATCTGTTGGGCTTCGCCCGCGCAGGTTTGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AAGTAACGCATTTCCCATTTAGGCGCTTGGCGGTCTCATGAATTAATGTTTAGGAACAAATGGAGTAATAACAAAAACGACATAGTCGCTTTCCAGCGTT TTTAAATGTTTTATCTGCTTCTTGATCTTCCTTTTAATTGAGCTGAACTGGGCCCATACTGCTATTCCTTAACTACTTGTGATGGAAAtgttaatacaaa + 45684_PtRNAdb chr-6.trna15-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 15 12272362 12272443 Ser TGA 0 0 80.7 46.10 34.60 Inf Ser 119.7 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTTGAAATCTGTTGGGCTTCGCCCGCGCAGGTTCGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AAGTAACGCATTTCCCATTTAGGCGCTTGGCGGTCTCATGAATTAATGTTTAGAAACAAATGGAGTAATAAAGAAAACGACATAATTGCTTTCCAGCGTT TTTAAATGTTTTATCTCTTTCTTGATCTTCCTTTTAATTGAGCTGAACTGGGCCCATTCTTTAGTGTAGACATACTTCAGCTGTTCCTTAACTACTTTAC + 45685_PtRNAdb chr-6.trna16-Val-GAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 16 14389453 14389529 Val GAC 0 0 35.4 10.00 25.40 Inf Ala 32.5 IPD:-19.70 Phanerogamae -NA- Dicot AGGGaatgaATATAACTCAGCGGTAGAGTGTCACCTTGACGTGGTGAAAGtAATCGGTTCGAGCCTGATTATCCCTA 77 >>>>.....>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGAAAGGAAGCCTAGCTCCAAGTTGTTCACGAATAGTGGTGTTGTTGAGTTTCTCAATCCTTTGACTTAGGATTAGTCAGATATATTTCTTGATGAGGGT AACCCAACGTGCGTTTTTCCATTTGCCTTGCCCCCTGCCATGATCGAATAAGAATGGATAAGAGGCTCGTGGGATTGACATAAGAGGGTAGGGATGGCTA + 45686_PtRNAdb chr-6.trna17-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 17 25060591 25060662 Asn GTT 0 0 56.3 42.40 13.90 Inf Asn 52.1 Phanerogamae -NA- Dicot TCCTCAGTAGCTCAGCGGTAAAGCGATCGGCTGTTAACTGACTGGtCGTATGTTCGAATCCTACTTGAGGAG 72 >>>>>>>..>>>.........<<<..>>>>.......<<<<......>>>.>.......<.<<<<<<<<<<. CTACGAAGAAGTTCCAGGGGTTACGAAGGAAACTTCGAGTTCATATTGGTCATGGGTTGGGAACGGGAATTGAACGCTATGAGATCTAATCTCCCGTTGT ATTTGATTCATTCCGAATTAAAGAATTCAGAATGTCAAAATAAAAGGGTTCGCTTTGACCGTTAAGAGCAGGTAACCCGTTCCCTGTGTCTTTGTTTCTA + 45687_PtRNAdb chr-6.trna18-Arg-TCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 18 25297060 25297133 Arg TCG 0 0 81.9 60.40 21.50 Inf Arg 92.9 Phanerogamae -NA- Dicot GACCGCATAGCGCAGTGGAttAGCGCGTCTGACTTCGGATCAGAAGGtCGTGGGTTCGACTCCCACTGTGGTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gttattcCATATTTATATTGAAAGAAGACATAAAGTCTGGCAACGGAGAAGTATTACAAATTatcgtaaaattattttagtggAAAAGGTAGATTCATAT ATTATTGTGGCCTTTTTGTGGCAAGGGCGTTGGGGGGGGGGGCCAAATCGTATGTGCTTCCTGGAAATGGACCCTACCGAATCAGGGTTATACATTGCCA + 45688_PtRNAdb chr-6.trna19-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 19 29704927 29704998 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttataatttttttcttattcttttttcaaaatacaaAGTGTTATTTATTAGATTTATATTACATAATTAAGTAAACCTAGTTGCAGGTGAAAACACAGAA CTTCTGTTTTATGTATATCTTTTGGTTTCTTAAATGGGCTTGGACCCAAAAACTAAACCCAACGCCTAATGTTCAAATAAGCTTGACTATTCGTTGACTT + 45689_PtRNAdb chr-6.trna1-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 1 1654552 1654624 Phe GAA 0 0 53.9 34.10 19.80 Inf Tyr 59.4 IPD:-7.40 Phanerogamae -NA- Dicot GTTAGGATAGCTCAATTGGTATAGTAGAGGACTGAAAATCCTCGTGtCACCAGTTCAAATCTGGTTCCTAGCA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATTCAAGACTTTTAATTTAGTactttttcgttttttttcatttttttaattgacatAGACCCAAGTCATCTAGTATTATGAGGATAATGCGTTAATAATG TATGATTAATTTGTATGAGTCCAGTGTACTGTAAGTCTAGTAAATCACATCtctgtctctatcttctgggagtcatctaCTCCAATGCTCAAGACAAAGC + 45690_PtRNAdb chr-6.trna20-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 20 30404433 30404506 Val AAC 0 0 69.6 42.20 27.40 Inf Val 91.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCAGTTCGAGTCTGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAAGCTTTgaaacccaaaaaagaaaatctagaAGCTATATTTTGCCTtgctttttatttctatttttaagtaattttgtaTGGTAAATCTGCACAAAAAT TTATTTTTTCCCAAGTTTAGTTTTGTGGCTTACTTACATGAAGTTTTGCTGCCGACATGTCCAAGAAAAGCTGCCACTTCCTTCATGCTCTGCAGCTTAC + 45691_PtRNAdb chr-6.trna21-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 21 32162848 32162937 Tyr GTA 32162885 32162901 74.3 42.80 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>........................<<<<<.....>>>>>.......<<<<<<<<<<<<. ACTTAGACATTAGTTTTGAGTTGAGTTAACTTGAAAGTTTGACATTTTGAGAAAGtccttttaattatatatttgtaaattctTCTCCGGTGTACATCGT TTCATTTTTCCAAGAGTAtctttttgggttaattccaaCAATGGTCCCCGAATGatgttttagattttaaattggtctCTATTTAAGGGTGAACAATCAG + 45692_PtRNAdb chr-6.trna22-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 22 32172702 32172791 Tyr GTA 32172739 32172755 74.3 42.80 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>........................<<<<<.....>>>>>.......<<<<<<<<<<<<. TTTAGGTCAGTTTTGAATTGAGTTAATTTAGAAGCTTAACATTTTGAGAAAGCCCTtccatttgatatatatttgtatattctttgattGTGAACATCGT AATTTTTGCTTTATTTCGGGTTAATTTCAACAATGATCCACGAATGATGTTTCAGATTTTGTAACGCATATGGTAAAAGTCTACCTTGAATCCCTATAGT + 45693_PtRNAdb chr-6.trna23-Sup-CTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 23 33011130 33011203 Sup CTA 0 0 46.2 19.40 26.80 Inf Ile 42.5 IPD:-42.50 Phanerogamae -NA- Dicot GCGCTCTTAGTTCACTTcAGTAGAACATGAGTTTCTAAAACTCAATGtTGTAGGTTCAAATCCTACAGAGCATG 74 >.>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<.<. tattatatatgatatatgatagTATAGGTGTGCGCGATGTATTGgggttataaaataaaagaatcctCTTTTTTACAATCTTATTTATTATGATAAGAAA ATTCCGCTCTTGTTAGGTCTAAAATTAAACCGaactgaaaaaaaattgaacagtaatttgaatttgaccttattggattaaattattaaattaaaattat + 45694_PtRNAdb chr-6.trna24-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 24 33100727 33100799 Arg ACG 0 0 71.7 49.10 22.60 Inf Arg 91.4 Phanerogamae -NA- Dicot GACTCCATGGCCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGTGGAGTCG 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. catataaaaattagaattctCCCAACAGCGAGTcatgaaatttatatactttagGGATTAAAAggaattattattgttttatgcTGCACCCTTCAAAAGA ttTATTATTTCTGTGTTCCAGGattcattttttcttcaatcattgatttaaaatataaaatttatattaatgtttgttgcaattaagaaatattataaaa + 45695_PtRNAdb chr-6.trna25-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 25 33345158 33345239 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AATACATTCATTGAATTAAATCTCAAAAGTAggaaattaataacacaatgtCCTAAATAATAGAAGTATGTACGTACTTTATTGAGATTAGATAAAATTC ttatcttattttatttccgCCCCGTTTTGTTTTCCTGAAATCATAAACCAAAAATGTCCCCGCTCTTTTGGAGAATTTACGGGGAGGTACCCTTGGGCCT + 45696_PtRNAdb chr-6.trna26-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 26 33347599 33347680 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AATCAATGTTCCCAAATGAGAAGGAAGAAAAACAGTTTAAGTTGAATCtcgaaattaaaattaaaatattaaaattatgtatttaaagCCTTCAGAAATT ttttaattttatttattgctGCCTCGTTTTGTTACTTTTCAGCAAGTGGTAAACCAAAAATGTCCCCGCTCTTTCGGAGAATTTACTGCTACGTACCCTT + 45697_PtRNAdb chr-6.trna27-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 27 34072802 34072873 Asp GTC 0 0 67.8 44.80 23.00 Inf Asp 92.9 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGCGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTTAAAGTATGCGACAATGGAATCCaagaataattcgaataatcttacgaattttttaatatagatttgatttgtaattatgatgattttaagCAAACAA gtttttatttttaatttcagtaTTTTCGAGTCTTACGTTTTAACAAGTTTGTATTTGCAGCATACTACTCTTCGTTTCTTTCTAGATTCTAAGTTCCTTC + 45698_PtRNAdb chr-6.trna28-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 28 34159299 34159369 Gly GCC 0 0 55.7 46.90 8.80 Inf Gly 78.5 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATACTGCCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<. GTCCAAAGATGGACTAAGCTTGACTGAATATACTTTGTTGGATTAAGCTTGTTTTTTTTacagtaaaatataatttttatttttgctcttTGATTAAGGT CTGAAGGAGCTGTGATGAGTATTGCGCTCTCGTAATGAATTGGGTCATCACAACCTTCTGATATTCGGATGTGAAGTGTGATCCGCGCTGCTGAGCtttc + 45699_PtRNAdb chr-6.trna29-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 29 34181656 34181726 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aaactatttaaaaatagcTTTATCTACGAGGTTTAATTGGGCTAAAATAcctttcttaaaaaaagaacaaatataaaatttaatatttctaggaCATGAA CCATAGGAGCTGTGATGAGTATTGCGCTGTCTTGATGGTTAGGGTCATCATAATCGTCTGATTTCAGATGTTAGCTGCGCTGCTGAGCTTCCTAAGCCTT + 45700_PtRNAdb chr-6.trna2-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 2 3046677 3046749 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTTGTCATCCCGGCAAATACACTATTTTTATTTGCTCAAATGCTCTCTTGAATTTGACAATATGgagatatttttattcttgTAACAATATGCCCGAATG TTTCCAGACTTTTTTgccaacacttttttttttctaataagaAATCTTTTCTTTCAATGATACTAACACACAATGGGGATGTAGCTCAAATGGTAGAGCG + 45701_PtRNAdb chr-6.trna30-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 30 35152446 35152527 Ser GCT 0 0 77.0 41.10 35.90 Inf Ser 105.6 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGTTTCACCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AAACAGCAACTCAAATCTAAATTAACCTTCGGACAGAAAGTGTCTGAGTTTTATTGTAAATTActtttatatcataaatatgGCACTTCCAATCAACACC atttaaatttaaatttaaatttttttattttttgccacGCCGATACCTTCCTCTACCCGCGTAGTACTTGATCAGAACTCCAATCACTCCGGGGAAGCCC + 45702_PtRNAdb chr-6.trna31-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 31 35574294 35574374 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. ATGTCGGAGAGGGTATTGATAAAGTGCCTTCTAAGGCAATagaaagattttatttaaaaaatatatattatggtGACTTTCGGATCTTGGTCTCAACAAG gagttttctttagtttaattttgcATTCAGTCcctgtgttttttttattttttagatcatACTTTTCTCTGGTCCAATTCCGTCTTCAGTCCCtttactc + 45703_PtRNAdb chr-6.trna32-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 32 35586611 35586691 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. TCTACTCTTATTCACTAATAtactaaattttgtttaaatatacGTGGCTAAGCATTGTTACTACCACAATATTTAAAAGTGCCTGCTAAAATAATACGAA TTTACTTTTTGGCTTAATTTTGAGTCCTgtgttttttagattttatcaaaattttctctgGTCTAATTCCGCCTTCAGTCCCTttactctttatattttt + 45704_PtRNAdb chr-6.trna33-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 33 36008284 36008373 Tyr GTA 36008321 36008337 74.3 42.80 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>........................<<<<<.....>>>>>.......<<<<<<<<<<<<. TAAAAATTTCcgtatattttatatatttttcaactgCAGAAATTAGCAATGAAAACCTAAaccataatttcaaaaaaaaaatttgaaaagttacaCGCAA AATTATTTTAACCGTACTTTTATAATTGGGTTAATGTACTCTTTGATATCTTAATTTTGCTTCAACGTTCAATTTAGCAGCcggtttttttattatcaat + 45705_PtRNAdb chr-6.trna34-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 34 36259173 36259246 Pro TGG 0 0 24.1 17.10 7.00 Inf Trp 21.4 IPD:-14.80 Phanerogamae -NA- Dicot AGGGATGTAGCGCAACTtGGTAGTGGGTTTGTTTTGGGTTCAAcATGtCACGGGTTCAAATCTTGTCATCCCTA 74 >>>>>>>...>>>.........<<<..>>>>.........<<<.<....>>>>>.......<<<<<<<<<<<<. AAGAGGAAATGGAAAGATCATTTTTGTATATCAATAGATGAAATAAGGGTGTGGAAAACAAGATATGGATTCTCTACAATGACATTGTAGGCAAATTGAA CCTATTACTTCTCCTTTGAGCTGTAACGAGAGAGTCGttttagattgattaaaattaagcatacataatctatcattttctcatattatatatgatatat + 45706_PtRNAdb chr-6.trna35-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 35 36259429 36259502 Trp CCA 0 0 48.5 32.30 16.20 Inf Thr 50.5 IPD:-10.50 Phanerogamae -NA- Dicot GTACTCTTAGTTCAGTTtGGTAGAACGTGGGTCCCCAAAATCCAATGtTGTAGGTTCAAATCCTACAGAGCGTG 74 >>.>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. atattatatatgatatatgatagTATAGGTGTGTGCAATGTATTGGGgttacaaaataaaagaatccTCTTTTTActgtattatttattatgataaGAAA ATTTTGCTCTTATTAGGTAAAAAATTacaccaaattgaaaaaaaaaatgaacacaaCAATTCGAATTTGACCTCCTTGGAATTAatggtttaaaaatata + 45707_PtRNAdb chr-6.trna36-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 36 37405125 37405196 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tagtctatctatattaaatttacctagttttctatcatcaaaacaattttatttacaaGAAAAGAGTTATTAAATTTAACGATTGGGAATACCACCGATC AACTCCTGAAACGGTCggatctattttttttcctcttcagATATGGCCGATCTGGGTTAAACTCGACCCGAGTCGTTCCTGAAAGAATAAGGGAATCCCT + 45708_PtRNAdb chr-6.trna37-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 37 37405520 37405591 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGAGAGGAAGAAAGTCGAGAACCGCAAGCACATTTACTGAAGAGCTATGCAGTGTGCAAAAGAGTGTGAGACTCAGGTATATTTAAAGGTGAAATCTAAC AAATCCTGATACAGtcggttcttttttttttttgcctcttCGTATATGGCCGATCTCGGCTAAACTCGACCCGAGTCGTTCCTGAAAGAATAAGGGAATC + 45709_PtRNAdb chr-6.trna38-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 38 37405918 37405989 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAAGAGGAAGAATGTCGAGAACCGCAAGCTCATTTACTCAAGAACTATGCAGTATGCGAAAGAGAGTGAGGGTCAGGTATATTTGAAGGTGAAAACTAAT AAATCCTGTAGCAGTCGGAtctatttttttcctcttcGGATATGGCCGATCTGGGTTAAACTCGACCCAAGTCGTTCCTGCAAGAATAAGGGAATCCCTG + 45710_PtRNAdb chr-6.trna39-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 39 37409798 37409869 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tacttttttcctttaaattacACTCACAAAGGAAAGGTAGGAGAGAGTGATTTATAAAGTTTACAACTAATAAGTCTTAATGGTACAAATAACACCACCA AATCCCCGAAAAACTTCGgatcactttttccttttctgccTCTTCGGATATGGGCCCATCTGGGCTAAGCCCGATCTGAGTTGTTCCTTAAAGGGGGAAA + 45711_PtRNAdb chr-6.trna3-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 3 3046824 3046896 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACGGGGTTCGATCCCCCGCATCTCCATTTCCAGACTTTTTTgccaacacttttttttttctaataagaAATCTTTTCTTTCAATGATACTAACACACAAT TTTTCAGACTTTTTTgccaacacttttttttttctaataagaaattttttctttcaatgaTTCTAACACACAATGGGGATGTAGCTCAAATGGTAGAGCG + 45712_PtRNAdb chr-6.trna41-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 41 41442792 41442863 Tyr GTA 0 0 57.9 47.10 10.80 Inf Asp 84.0 IPD:-79.80 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTGTTTCCGCCTGTAACGCGGGTGaCCCGGGTTCGATCCCTGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AGCCCTCTGTTTCACATTTTAGAGCTGGTATCAAGTCTCAATGTTGTAACCCATAAGAAAAATCATTCTATAATATGTTTTGGATATTTCAGTCAGGAAG ttttatttttatttttttatggtcaataatcaaattcatagAAGCGGGAAGCCGGCGGCTTTTTCCTGGGGAAACGTCTGTTCAAAACGAAACGCGCTAT + 45713_PtRNAdb chr-6.trna43-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 43 43341000 43341071 Gln TTG 0 0 73.5 53.70 19.80 Inf Gln 104.8 Phanerogamae -NA- Dicot GGTTCTATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTAGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AATTGAGAATGATCCGTTCACAAACTTGCAGAATAATCTCATACCCAttgcaaaatttatttttgttttatttagtgttatttaatCATTCGGCATCAAG TTTTACTCGCTTGATTCATTGATTCGGATAATTAGATCAATGTACTTgaatattttggtatttaagtTACCATAATAAAAACTAGATAGCATGTGGAAAC + 45714_PtRNAdb chr-6.trna44-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 44 44736277 44736350 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aaagataaTGCAGCATCTAGTTCattcttttacctttttacaCCCTATCAGCTTTTTggatactttttaaaataaataaaagtacatTAATAAACAAGTT TTTTTTTCTTATGAGTGATTTTACAAGTTTACTGCATTGGACTTGGCCCAGTTCAGAGTCATTTTCCCCTTTTGAATTGCAAGTTTACTGCTGCACAGAA + 45715_PtRNAdb chr-6.trna45-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 45 45745384 45745469 Phe GAA 45745421 45745433 70.9 51.00 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>....................<<<<<.....>>>>>.......<<<<<<<.<<<<. TACGATATACAAATATGGAACTAGACGATTAATTGCAAATTTACCGACAACAATTTAAATCAGgaaatatttaatcatatatgaaattaataatcgACTT TTTGATGGATTGTGGCTACATGCTTTGCGTTTAGCCAATTTTTGACTTCTTTGGGAAGAAGTCTAGCCCACAAAAGCGACTCTTTCTTCACTTctatcca + 45716_PtRNAdb chr-6.trna46-Ser-GGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 46 45923772 45923858 Ser GGA 0 0 42.6 30.10 12.50 Inf Ser 56.9 Phanerogamae -NA- Dicot GGAGAGATGGCTGAGTGGTtcAAGGGGTAGTATTGGAACTTCTATGTAGACTcttgTTTAtCGAGGGTTCGAATCCCTCTCTTTCCG 87 >>>>>>>...>>...........<<..>>>.>.......<.<<<...>>.......<<....>>>>>.......<<<<<<<<<<<<. CCGGAGGCTAAagaaaaagtgataaaaaaaatgatgaaaagttttctatttttatagcAAGTTTCTATTTGCTTAGGGTATCGGCCATAATAATTATGTA CACCTTCACCTAATTCGCCGATGTAGCTGACTacaatatatcaaatcaaataagaACATATACTAAAGAATTAATAGACCCTTCTTTAGTATAGATTCTC + 45717_PtRNAdb chr-6.trna48-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 48 47030193 47030264 Trp CCA 0 0 68.9 45.50 23.40 Inf Trp 98.0 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTAACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<. CACATTCGTTTTAATCGTTATTCGGCTGAGTCCTGTCATTAACTAATATACCCATgttttattcattattaaagGTTTCTTAAAGATAGTAAAATAACGG AATCCCATGAACTGATCTCcggtttatctatttttatttcagatcCCAAGTCCCAACCCAAATTTCCGTTGGCGTAGGTACCAAATAGTCCAATGCATTG + 45718_PtRNAdb chr-6.trna49-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 49 48356235 48356308 Ile AAT 0 0 82.4 58.90 23.50 Inf Ile 107.0 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAAACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AATATTGCATGAGAATATGATCACTACTATGGAATAggagtaaaaatatatttacaaacaCTTgcattcttttaactttttgaacAAAACGTTAACAACT GTacttataaataagaaatatgatTTACTTttgttaaatgaatttatataataaaaaatttaattttatactaaattatttatatctaaatTGTTCAGTT + 45719_PtRNAdb chr-6.trna4-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 4 3046971 3047043 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACGGGGTTCGATCCCCCGCATCTCCATTTTCAGACTTTTTTgccaacacttttttttttctaataagaaattttttctttcaatgaTTCTAACACACAAT TTTTCAGACTTTTTTgccaacacttttttttttctaataagaAATGTTTTCTTTCAGTGATTCTAACACACAATGGGGATGTAGATCAAATGGTAGAGCG + 45720_PtRNAdb chr-6.trna51-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 51 49766887 49766967 Ser AGA 0 0 44.0 28.10 15.90 Inf Ser 67.3 Phanerogamae -NA- Dicot GGGGACGTGCCGGAGTGGCtATCGGGATGACTAGAAATCATgTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 81 >.>>.>>..>>>>........<<<<..>>>.......<<<...>>>>...<<<<..>>>>>.......<<<<<<<.<<.<. ATAaagcatgaaaagaaaaagattaaccGATGTCAAAAAGGGAATTTCTGCTTTTAGGTGCCTTGgtgtaaaattatatatggaaattatgataaaaatg tttttatagttttttacaGTGGCCTTGTAGTTGTAGCCAATAAAGGTGATATTGCTTATTTACTCAAATTATGCATAAATGCCTCCCTATTTCgtctttc + 45721_PtRNAdb chr-6.trna52-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 52 50305874 50305944 Gly CCC 0 0 66.0 29.20 36.80 Inf Gly 87.4 Phanerogamae -NA- Dicot GCGCATCTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGaCCGGGGTTCGATTCCCCGGATGCGCA 71 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tttattgcaCACATTGCACTTTAGACCAAAAATTATCTATAGTATTGAGATTTTTGAAATGGTATTTTAGTCTTAAATTTTGTAGGTTCGAAAACAAGAG GTAAGGAAATTAAAAATGGTTGCTTGAATCATGATTATCTTTTTGAATTTGAACAGATATGTTACAAAGAAACATGATTTGATGGACACCAACATAGTTA + 45722_PtRNAdb chr-6.trna53-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 53 50870859 50870931 Val TAC 0 0 78.2 43.80 34.40 Inf Val 106.2 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTTAGTCTTACACACTAAAGGtCCCCAGTTCGATCCTGGGCAGCAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AATGAGACCTCCGCCTGCAAATTTGCAAACAATAGCTTCAAGGAAAGCTCCAAactctttttatttcaataaaattatttcaacaaGTTGGGCATCACGG ATTGGAGGTAGACAGCTCTTTTAGTTTTTAGGCTTCCCTTAATTTCGTTTTATGTTTTTgctgtaaaaaaataaacaaataattgcTTATTTCGAAGGTC + 45723_PtRNAdb chr-6.trna54-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 54 50505112 50505041 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AACTGgccattatattaatttttaaccataaTTCAAAACCAAACACCATCAACTGTAAAGCGTCGcatcatataatatttattttgccACTTAACAACAA CACCAAGCGCGGTTTCTTTTTGTTAGGAATTTCAGCTCTTTTGTTTCTTAGTGATGACAATGCTGGTACAGATGATTGGAGATGCTTATATGAATGTTat - 45724_PtRNAdb chr-6.trna55-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 55 49767404 49767323 Ser AGA 0 0 77.1 42.80 34.30 Inf Ser 110.5 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. ataaatttattttctactaAAAATATTCCTGCTCTATTTAGATATAATCAACTTTTTGGTGCgttggtaaaaaaattatatggaaAACCTGATCAAAGTA tttttatagttttttacaGTGGCTTGTAGTTGTAGCCAATAAAGGTGATATTGCTTATTTACacaaattatacataaatgAAGTTGTTCTGGTAGTGCCG - 45725_PtRNAdb chr-6.trna56-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 56 49684059 49683978 Ser AGA 0 0 77.8 43.40 34.40 Inf Ser 110.9 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. CATGAAGGATGAAAAGAAATAGAGTGACCAACGTTAGAAAAGGAAATTCTAACCTTTTGGTGCCTTGGTATAAAGTTATATGGACAATATGACAAAAAGG ttttttttttttttttttacagtggCCTTGTAGCCAATAAAGGTGATATTGTTTATTTACTCAAGCTATACATAAATTAAGTTGTTCTGGTAGTGCCGCC - 45726_PtRNAdb chr-6.trna57-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 57 49045341 49045261 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. ATTagttaaagaaaatattaaaagaattcaaatgataaaaaaaaaagagtatttaGGTCTATTATATCCATATATAAACTACTGCGAGACTGAACAAGGC AGACTTTTGAGGATTAATTGCTACAAAGGTCcttaaatttatccatttttatcaaaattcttAAACAAGCTTAATTGTTACAAAGGTACTTAAattaccc - 45727_PtRNAdb chr-6.trna58-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 58 46957286 46957200 Met CAT 46957248 46957236 64.2 40.70 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>......................<<<<.....>>>>>.......<<<<<<<<<<<<. AAACGAGCTTTATTCTTACAGCATTCATAATCAAAATGCAGATTTCATAGCTTTTCTCTGAAAAGAACAATATCAGCTTAAGAAAAAGGGTTAGTAGAAA TTTCATTTTGAACTTTTTAACTTggattgttaaattcattatattttattttggtcatttttaatctttatatttttttaacattaaaattccACTCATC - 45728_PtRNAdb chr-6.trna59-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 59 46955531 46955445 Met CAT 46955493 46955481 64.2 40.70 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>......................<<<<.....>>>>>.......<<<<<<<<<<<<. attcaccaaaaaaaaaaattacggttaaaaaatgaagggaaaaatggtTAAAGGAAGAGCTTTTAACAATGAAAACAACTTGTATCCCAGAGGCAGGAAC TTTAGtactattttgatttaagggCTCGGTCCAGCAAGCCCATTACCTCAACCCATAAGTTTCATTTCCTAAAAGTAACTCTcccttttgttatttttta - 45729_PtRNAdb chr-6.trna5-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 5 3047118 3047190 Ala TGC 0 0 55.3 38.50 16.80 Inf Ala 86.6 Phanerogamae -NA- Dicot GGGGATGTAGATCAAATGGTAGAGCGCTTGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>.>>........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACGGGGTTCGATCCCCCGCATCTCCATTTTCAGACTTTTTTgccaacacttttttttttctaataagaAATGTTTTCTTTCAGTGATTCTAACACACAAT ATTTTGGATTTGTTTTTTGCCTAATAGcaaatttaatttgatcctaaatctaaagaaatcaacaaatttagcccttaatgtttttttaattctaattcta + 45730_PtRNAdb chr-6.trna60-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 60 46861972 46861899 iMet CAT 0 0 51.8 24.00 27.80 Inf iMet 103.8 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCtctGATA 74 >>>.>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<...<<<. TTCATCTAGATTTCAGGGACATCGAAACAAAAACAATGGTTCCGGCTGTTTGTATTGAGGTTTTACATTATGCTTAGTTATTGTAAAAGCTAGATAACTA GAGAAGACAGAATAACAGTAAAAGTGGAGGATGAATATGAAGTCTTaccattttattttagtattcaCCTATTCTActcaacaaacaaacaataaatttc - 45731_PtRNAdb chr-6.trna61-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 61 46243224 46243153 Gln CTG 0 0 56.3 34.20 22.10 Inf Gln 86.0 Phanerogamae -NA- Dicot AGTTCCATGGTCTAGTGGTcAGGACATTGGACTCTGAATCCAGTAaTCCGACTTCAAATCTCGGTGGAACCT 72 .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>.........<<<<<<<<<<.. TTATTTCCTTGCCCTCTGATGCGGTAGACGGGATGGCGCAAGTCGGCTATAAAAGCGTAACACAATAACAAGGTTAAGTTTGGCCCCACAATCTCAAAAG taattttgtttttctgttttgttttcttttaaaagtaacTACTATTACTCAATAAACCATGGGTATTAATTAAAAGAAGGTATAATTTAGTCACTagatt - 45732_PtRNAdb chr-6.trna62-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 62 45540048 45539977 Cys GCA 0 0 79.9 59.80 20.10 Inf Cys 108.3 Phanerogamae -NA- Dicot GGGTCTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttacaaatttagaaaaagaaagtagTTTGTTTGAAACAGGACTAAGTAAAGCGGGTCTTCacaatgtatttataattaatttgaccTCCCTTAACAACAA TACAAGTAATGTTGGGtaacttttgaaaattacaaaagaCTCTACTTCTGTTGAGTTACTATAACAGCGTTCTTCctgttattattaaaatttaattcct - 45733_PtRNAdb chr-6.trna63-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 63 44173416 44173345 Asn GTT 0 0 66.4 42.60 23.80 Inf Asn 68.4 Phanerogamae -NA- Dicot TCCTCAGTAGCTCAGCGGTAGAGCGGTCGGCTGTTAGCTGACTGGtCGTAGGTTCGAATCCTACTTGAGGAG 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTATGAAGAAGTTCTGGGGGTTACGAAGGAAACTTTGAGTTCATATTGGTCATGGGTTGAGAACGGGAATTGAACTCTATGAGATCTAATATCCCGTTGT atttgattcattttgaattaAAGAATTCAGAATGTCAGAATGAAAGGATTCGCTTTGACCGTTAAGAGTAGGTAACCCGTTCCCTGTGTCTTTGTTTCTA - 45734_PtRNAdb chr-6.trna64-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 64 43204915 43204843 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATTAATTTATATAGGTTTTTAGCTCTCCTTATTGTATGGCTCCTTTTCATGGTAACTAAACGGGATAAGTATTGGGCTGTAGAAGTGCATCACAAGCAAA TTTGTTTTTCCTTCTCAGGTCTACCGCCACCTGCAAACAGCAAACCCTCGCAACGGTAAATgagagattttttttgtttcttttgaaagaaCAAAGATGT - 45735_PtRNAdb chr-6.trna65-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 65 42906699 42906629 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GGTAGATAGTGGAATTTGTGGTTGATTTTGGTGTTTCGAGGGTAGTAGGATTATCAGTAATCGGTTAAGTATTTCTTTTCTGGAAGATACCCAAAAACAA tttttattcttttttggtttAAGAAGTTTGAACCAATGCTGTTTAGTTATAGAGACTGAGGGGGTTGCATCTGtattttaaagtttgttatTAACCTTCC - 45736_PtRNAdb chr-6.trna66-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 66 42746303 42746232 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCCGAAGTGAAGAAATggattaataatttaagttacTATATCAATAGACATAAGCCTATATGTCAGGCATATAATGAACCCAAAACAAAGAGCCACAGCA GTGCTTTGGTCGTCTTGCTTTTGGGTCAGTGTTAGACATATGGTTGAACCAGGGGAGAGCCTAGCTTTTTATCTGAAGTTGAAACCATACACAAATTATT - 45737_PtRNAdb chr-6.trna67-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 67 40699145 40699065 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. ATATCTTGAAAACAAAGTAATATGTGATAATTTTCTAGTCTCATTcctaaaactaaatttatgcaattttttaaataaaattttgatcaaataaacAAAC TTTATTTTGGGTCTGGTGGGCCATTAAACAAATACCAAAGCAATGGTCTTGTCTGTTGATGGTGGGCCATTAAACCTGGAAATGCTTTTATTGTTTGGGC - 45738_PtRNAdb chr-6.trna68-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 68 39814747 39814675 Lys TTT 0 0 88.7 64.40 24.30 Inf Lys 93.7 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. atatttactACAATTTCTTTCAATATCTTATACgccaattttaagttttaaaaacttaaagCAGAAGGATCTTATAAAGGTTTAAGGGTTAGATTGTGAA TTTTCTTAGTCTTTGTTtcttgggcctatatttttgtaCTTCATATTGGCTTAATCTATTCCCCCCCTTCCCTGAAGCAGAGTGATACAACCCCTTTTTC - 45739_PtRNAdb chr-6.trna69-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 69 39704073 39703991 Leu TAA 0 0 72.8 36.10 36.70 Inf Leu 93.0 Phanerogamae -NA- Dicot GCAGGTTTGCCCGAGAGGTtAAGGGGGAAGACTTAAGATCTTCTGTGCATAAGCACGCGTGGGTTCGAACCCCACAGCCTGCA 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. atattgtcattttttagctgagttggtgaactcgtgacaccaactcaagaCGGGTTGCTACTTAGAATTATATATCTTTATGCACGAAGGTTCCTCAACA ttataaagtttttttaattgtatattaAAACAATGGCAATTTGGAAATCCGTGGATATTGGAGACAAAATATTCAGAATGATTAGCGGCTGTAAATGTGG - 45740_PtRNAdb chr-6.trna6-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 6 6206924 6206996 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGTGATTTTTGTAAACTTGATACTGCGCTGCATGTTTCcatgttaattttattacattataaCTAATAATTTACAGTTCTGTCTCGCAAATAGAGGTAT TTTTGCGTTATTATTTAGTTTTCCTCACCCATTGGAATATTTTCTGTTAAAGCTTGTgcttagaaaaattaattttcgttTTTCAGCCataatagatgaa + 45741_PtRNAdb chr-6.trna70-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 70 35517702 35517622 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. TCACTAATAATTGTATGTGGCTAAGCTTTGTTACTACCATCATGTTTAAAAGTGCCTGCTAACGGaaacattttgtttctttacAGAAGACAGACATAAA TTTACTTTTGGCTTAATTTTTGAATTCAGTACTGtgctttttagatttttttttatcaatttttttctctggTCTAATTCCGTCTTCAGTCCCgttgttc - 45742_PtRNAdb chr-6.trna71-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 71 35338053 35337971 Leu TAA 0 0 66.3 29.20 37.10 Inf Leu 93.6 Phanerogamae -NA- Dicot GCTGGTTTGCCCGAGAGGTtAAGGGGGCAGACTTAAGATCTGCTGCACAAAAGTGCGCGTGAGTTCGAACCTCACAGCCAGCA 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. ATaccaaaaattttgagttatacTAAAATTTCTGACTGAAGAGTTTGAATTTTTGCATATAGaaaaagtataattctatatatGGTTTAGTGAACAGTTG aattttaatttttttattactttttttgctttatatattataatgaaaagataattgtGAAACGAACAGCTGGTTTGCCCGAGAGGTTAAGGGGGCAGAC - 45743_PtRNAdb chr-6.trna72-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 72 35337902 35337820 Leu TAA 0 0 69.1 29.50 39.60 Inf Leu 94.2 Phanerogamae -NA- Dicot GCTGGTTTGCCCGAGAGGTtAAGGGGGCAGACTTAAGATCTGCTGCACATAAGTGCGCGTGAGTTCGAACCTCACAGCCAGCA 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. AGTGCGCGTGAGTTCGAACCTCACAGCCagcaaattttaatttttttattactttttttgctttatatattataatgaaaagataattgtGAAACGAACA aattttaatttttttattacattttttgctttatatattataatgaaaagataattgtGAAACGAACAGCTGGTTTGCCCGAGAGGTTAAGGGGGCAGAC - 45744_PtRNAdb chr-6.trna73-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 73 35337751 35337669 Leu TAA 0 0 69.1 29.50 39.60 Inf Leu 94.2 Phanerogamae -NA- Dicot GCTGGTTTGCCCGAGAGGTtAAGGGGGCAGACTTAAGATCTGCTGCACATAAGTGCGCGTGAGTTCGAACCTCACAGCCAGCA 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. AGTGCGCGTGAGTTCGAACCTCACAGCCagcaaattttaatttttttattacattttttgctttatatattataatgaaaagataattgtGAAACGAACA aaatataaatttatttttactttcttgctttatatattacaatatgaatttaattgtgaaatgaacATTGGAATCAGCTGGTTTGCCCGAGAGGTTAAGG - 45745_PtRNAdb chr-6.trna74-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 74 35337458 35337376 Leu TAA 0 0 62.6 33.50 29.10 Inf Leu 78.6 Phanerogamae -NA- Dicot GCTGGTTTGCCCGAGTGGTtAACGGGGCAGACTTAAGATCTGCTGCACATAAGTGCGCGTGAGTTCGAGCCTCACAGCCAGCA 83 >>>>>>>..>>............<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. AAGATCAAATACACATAAGTACGAGTGAGTTCTAATTTCGTATCTCACATCcagtaaattttaattttaattttaagttgtgGAATTAACACTGCAATTG GTTATTTTGATTGGcttgtttgaaatgttatgccGACAGTATTCCTAATAATTGTTTCTATTTCGATACTAACTaaatcattttgaatttaactttttga - 45746_PtRNAdb chr-6.trna75-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 75 34710539 34710467 Val TAC 0 0 77.8 43.10 34.70 Inf Val 106.5 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTCAGTCTTACACACTGAAGGtCCCCAGTTCGATCCTGGGCAGCAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATATCGcagtttcaaattttcatttccttCGATGGGCTGCagatattttttcaatttatcattaaaatattaaataattttcaaagacCACAACCAATAA GGTTCAACTCCCATTTTGTGGTTCTGATTCTGACATTTTTGGGTCATCAAATCTTAACAATCCGAATATTCCAACTTCTGGCGTCGTGTATGCGTGAGAG - 45747_PtRNAdb chr-6.trna76-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 76 34514407 34514336 Arg TCT 0 0 47.3 22.70 24.60 Inf Gln 57.3 IPD:-31.90 Phanerogamae -NA- Dicot ACGTCCATTGTCTAATGGAtAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATCCTATTGGAAGCA 72 .>.>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<.<.. ATACAATTTTTCACATGTTCTTTAGTTTTTCCAaccaagagaaaagaaaaaaaccgaacaagagaaaaaaagtcaaaatgtcaaaaaatcGTAATGAAAA ATTTAGAAGTGATTTCTCTATATTCCATTAAGTtagaattttctatttataattgTTCCTGAAGTCAAAAACGTTCCATTTGGTCTTGAATAACTTCTTT - 45748_PtRNAdb chr-6.trna77-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 77 29705237 29705166 Pro TGG 0 0 69.2 36.90 32.30 Inf Pro 112.8 Phanerogamae -NA- Dicot GGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAACGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGTGTATTTTAAAGATAGTAATTGCTTGCCCTCTGCCTGTTGTCATTTCATTCTGACtacttataattaaataatttgtttgaaACCCACAGAACAAGGA TTTAAAAgcaatgttttctttttgtccttttttgtttaaaaaagtCAAGCTCTTTTTCTGATCTAAAAAGTCAACGAATAGTCAAGCTTATTTGAACATT - 45749_PtRNAdb chr-6.trna78-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 78 29344425 29344344 Ser AGA 0 0 75.6 41.30 34.30 Inf Ser 109.2 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTTCGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AGAGTAAAGAAAGTGATTCAAAATCAGATATTTTTAATACTCAACTTGAAAAGCATATCAAAAGTAATATAAAAGACTAAGCTGCTAATTGATTAATCAA TTCTTTgaagtatttaaattttcaatttatattgcGAAAAGCGtctttttctaaatcaattccattttgaaatttatttaatattttaatccttaattcC - 45750_PtRNAdb chr-6.trna7-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 7 6211698 6211770 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tttgTGAACAAGCTCATGGATttgcatataaaaattaagattgGGTAGTCCCATACTTTGacaaacaataaaatacaaTTCTGTTTTGAAGTGAAGGCAT ATTTTTTCTCTGCCCATTTGGCGCTATTATTTTCTCCTTCAAGTAGTTTTCCTCTGAGCTAAAAATGGAGATgatatgtgaatatatatagTTCCAATGA + 45751_PtRNAdb chr-6.trna80-Leu-CAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 80 21652015 21651935 Leu CAG 0 0 69.5 46.80 22.70 Inf Leu 109.7 Phanerogamae -NA- Dicot GTCAAGATGGCCGAGTTGGTctAAGGCGCCAGTTTCAGGTACTGGTccgaaaGGgCATGGGTTCGAATCCCATTCTTGACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. CGTGTAAAACGtttgcatttttcttttttcttttaatggatatttgatttccatttttctaatttttattagCTAAATATCTACACGTTATGAACAAAAA AATTTctgtatttttacttttaaatataacGGCTGGGCTAACATAACCCCTAATtgaaacaatataattttaaaaaaaatacaaaaccaATTCACAGCTA - 45752_PtRNAdb chr-6.trna81-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 81 20716098 20716025 Met CAT 0 0 52.1 30.00 22.10 Inf Thr 59.1 IPD:-41.40 Phanerogamae -NA- Dicot GCATCCATGGTTGAGTGGTtAAAGCGCCCAACTCATAATTGGtGAATTCGTAGGTTTAATTCCTACTGGATGCT 74 >>>>>>>..>>>..........<<<.>>>>>.......<<<<.<.....>>>>>.......<<<<<<<<<<<<. GTCCTTTCATTGATTCCTCCTAAATTGCATTGAtttatcttaaaaatttcatttcaatattgGAATTTGGTTATTCACCATGTACGAGGATCTCCGCTAA CGCTAGTAGATTATATTTctagtattttatatataaataaatgcttaattgttgtataaaaaaactttaataaaaagaattaaaagacaAAGCGTCTCAC - 45753_PtRNAdb chr-6.trna83-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 83 13644241 13644170 Gln TTG 0 0 74.2 54.70 19.50 Inf Gln 105.6 Phanerogamae -NA- Dicot GGTTCCATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTGGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aaagaaagcaaGGTTATTCAAGTGTTTTTAAGCAGTGAAATGATTACGTCGATTGATGGTCGAGTTATTTCTTCTTTGTTAGATGAAGCTGAGCATAGGC CCTTTGCATCAACTTTTGGGTCTTTTTTTAGAATTACACATGTATTTTAGTCcaactattataatattaatatgatgatttaaattaaaaaggtatAAAC - 45754_PtRNAdb chr-6.trna84-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 84 9180854 9180783 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TAGggaataaatgtatataataacatataattttttgaaaaaggacatttttttctgaaaaatatgtgaaatttaataaaacttgACCGGTAAGCATCTA attttcatttttttttatttttttcatttttcattggTTATGCGTTAAACCGGATGCCAATAAAATGTAAGAAAGATGGGTGTTGAGAGACCTGGGGGCC - 45755_PtRNAdb chr-6.trna85-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 85 9150775 9150704 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. actattCTGTCACGTTTTCATATAATTATCTGAAGACGacattttatcttcaaaatactaaaatattgaaaatgacAAAAACTTGATTTTCGAACATCAA attttcatttatttcatttttgcaaCCGGAACCTCGGGTTggataaaaaatgaagaaaacggCTAGTTCGAGCCCAAATTGTCCTGAGGACCGAACCAAA - 45756_PtRNAdb chr-6.trna86-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 86 6294669 6294597 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CCAAGAAAGTTCAGAACATTGCAAGAGGAAAGCGATTTCTATAAACTTTGGGCAATTTGGATTTTCATTATGAgtgtgaaattaaaaattgaaacatCAA TTTAATGTTTTTCTCTCAAGTTTTTTAAGTTCTTTCTTCAGCCAtaataggtatatatatatatatatagtttcaatgAAAAACAATCAGCTCATCGTTC - 45757_PtRNAdb chr-6.trna87-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 87 6289319 6289247 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGTGATTTTTGTAAACTTGATACTGCGCTGCATGTTTCcatgttaattttattacattataaCTAATAATTTACAGTTCTGTCTCGCAAATAGAGGTAT TTTTGCGTTATTATTTAGTTTTCCTCACCCATTGGAATATTTTCTGTTAAAGCTTGTgcttagaaaaattaattttcgttTTTCAGCCataatagatgaa - 45758_PtRNAdb chr-6.trna88-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 88 6279810 6279738 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CGAGGGGGAGGAAAGCGATTCCTGggccaaaaaggaaaaaaacttgAGGCAATTTCTTTTCTGAGTAATGAAATATAAAAGTGAAAAGGGTACAAGGAAG CTTACTACTGtttcaattagtttttaaaacatgtttctaTTCCCCATTTGCATGGGTGATAAAGTTTTAAAGTGATGTAGCAGAGTTTCTATGAAACACA - 45759_PtRNAdb chr-6.trna89-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 89 6133571 6133500 Gln TTG 0 0 41.8 24.80 17.00 Inf Arg 33.3 IPD:-13.70 Phanerogamae -NA- Dicot TGGGGCGTGGCCAAGTGGTAAGGCAACGGGTTTTGGTCCTGcTATGCGGAGGTTCGAATCCTTCTGTCCTAG 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<.<....>>>>>.......<<<<<<<<<<<<. AAGAATCTAATCTATTCCATAGCTATAGCTATTTGGAACTGGAATTGATGAACAAGGAATACCCATATTAGTGTTTAGTAGTTTCAAATAGAAATCTAAA AGCATactctatttatatatattagaataaCCATATCTGAATCTAAATtgctctttttttgtttttaataaccTTCTTTCTAACAGTCAAGTATTGGAGA - 45760_PtRNAdb chr-6.trna8-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 8 6238058 6238130 Ala AGC 0 0 45.7 30.00 15.70 Inf Ala 80.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCACTTGCTTAGCATGCGAGAGGtACGGGGATTGATACCTCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAAGAAAGAGATTTCTATAAACTtgcaccaaaaagaaaaaaacttaagGCAATTTCTTTTCTGAGTAATGAACTATAAAAGTGAAAAGGGTACAAAGAAG CTTTTTGTTTCCTTTAGCttttaaaacatgtttctaTTCCCTATTTGCATTGGTGATGAAGTTTTAAAGTGATGTAGCAGAGTTTCTATGAAACACACCT + 45761_PtRNAdb chr-6.trna90-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 90 2390137 2390065 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tttaccctttttatagaaattttaatctACGTTGggttaaataaaagaaatcctATTTACATAATGAAATATAGTTTTTCTTAAGACCAAGAAATCAATC ATCTTTACATTAAacaataactatttttgtacaaaTAATATCTTTGATAACTGTATAAAATGTTTGTAGAGATAAAACATTTCACCTTCTGCTTCATCAT - 45762_PtRNAdb chr-6.trna9-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-6 9 6242493 6242565 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCGAGGGGAGGAAAGCGATTTCTGGGCCAAAAAGGATAAAAACTTGAGGTAATTTCTATTTTGGGTAATGAACTATAAAAGTGAAAAGGGAACAAGGAAA CTTTTTGTTTCCAAGCttttaaaacatgtttctaTTCCCCATTTGCATTGGTGATGAAGTTTTAAAGTGATGTAGTAGAGTTTCTATGAAACACACCTCC + 45763_PtRNAdb chr-7.trna10-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 10 5282347 5282419 Val TAC 0 0 78.2 43.80 34.40 Inf Val 106.2 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTTAGTCTTACACACTAAAGGtCCCCAGTTCGATCCTGGGCAGCAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AATGGTCAGTTAATGGCAGCACTTAGTTAAATTGGATGATTGCTTTGTTTCCAAAAGTTAATGCACTGAACTAATTAATTCTTTTACGGCTGACATGAAG TGATTATCAAAATACTTACTTTTGTACAGCTTTGCTTGActtaattttccttttgattcCTTAACCTTAAATTAAATTGTGCTTTGGATATTTCTTAGGT + 45764_PtRNAdb chr-7.trna11-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 11 6098951 6099022 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTTGTAGCTATGGTGTGAGAGTACGGTCTATTATTTCTTTTGCGATGTGTATGGGAAAGTTattagttttatataaaaagcttCTAAATCTTATCAACAA ATTTCCcgattttttaatttcttttgtgtGATGGACGTTagaaatttggtaaaattgtctGGAAGCCCGAGTTAGATTTTATTTTGCACttttattaaaa + 45765_PtRNAdb chr-7.trna12-Thr-GGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 12 6133401 6133472 Thr GGT 0 0 36.6 19.10 17.50 Inf Cys 52.2 IPD:-1.00 Phanerogamae -NA- Dicot GCCCTTTTAACTCAGTAGTAGAGTAACGCCATGGTAAGGCATAAGtCATCGGTTCAAATCTGATAAGGGGCT 72 >>>>>>>..>>>>.......<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<. aaataggtTTTCTTACTTCATATTTggggtcccgaaactactattctgattaggcccaaaatcgggctgttataGATTCATTCAATAATTGAATCGAACT TTTGactttttttcataaaactcCTATTTGTTTTGTAATTTCAACTATGTTTGTATTATTGGTtccatttttccatttcttttaagaaatattttcaatt + 45766_PtRNAdb chr-7.trna13-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 13 7462032 7462118 Tyr GTA 7462069 7462082 74.4 43.00 31.40 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>.....................<<<<<.....>>>>>.......<<<<<<<<<<<<. aattcaattcatataataacGATTTATAATTTTACGAACAGAATTGCTTTTAAGttttcttaatattattatggtaTCTTAGCTCACTCAGCAGCATAAT ttatttttccttttttcacaTTTGATGAAATTACTTGTCAGTTCCCATCCGGATCAATTTAATTCTctccattaaaaattttaagaaataaattaagtCC + 45767_PtRNAdb chr-7.trna14-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 14 8257958 8258029 Gln CTG 0 0 66.7 47.80 18.90 Inf Gln 96.2 Phanerogamae -NA- Dicot GGTTCCATGGTCTAGTGGTcAGGACATTGGACTCTGAATCCTGTAaCCCGAGTTCAAATCTCGGTGGAACCT 72 >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<<<<<<<<. CATATAAATAAATCTTCATTAGTCTCAAGCTCAATGCGGGAGAGTGAGGAAGTTAAAAGTTAATGGTGAAATATATGTACTAACaaaaatgtaacaaatt ATTTTTGTGTtactctttttcctttcctGGAGAGAAAGATCAAATCCCTAACTTACCACTCTTCTCGCTATGCACCCCACTGGAACCCCTAAATTAATCT + 45768_PtRNAdb chr-7.trna15-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 15 8745872 8745941 Glu CTC 0 0 22.8 17.60 5.20 Inf His 11.3 IPD:-11.30 Phanerogamae -NA- Dicot GgTTgGGTGCAATGGTaaAACACATTGTACTCTCAAGGGGAAAaTCTAAGTTCGAACCTTAGAGACAACA 70 >.>...>>>...........<<<.>>.>.........<.<<....>>>>>.......<<<<<<.....<. ACACAACaccttaatatataaaaaaataaatgtttttcttttaaatacatgaaaatttaacacgaatagtttactaaaaatatgaaatataccAATAAGT TTGTTGAGAGGGACAATCACGAATCCTAAACATGCATCGTAAAACAGACatgcataatatataaaaaaaatatatgaaatgtaagtaaaaaaaatataat + 45769_PtRNAdb chr-7.trna16-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 16 8921100 8921185 Met CAT 8921138 8921149 64.2 40.70 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>.....................<<<<.....>>>>>.......<<<<<<<<<<<<. AGCtccaaataatttcttttatcaatCATCATAAAGTGCAGACTGCAGGTTGATAATgaaaaagatatttaaataattttttctcaaCCTTTGCCACGAA ataatttttcaaatccaTTTGAATTAAGCATAAAGCAATAATATTTAAGGATGCATTTAGCAATGCTGAAAAAAAGCTTTTTTGATTTCTGTGCTATACA + 45770_PtRNAdb chr-7.trna17-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 17 8984036 8984108 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GAATTAATTTCCCCTTCGCAATCCGGGCGGGCCTTGCGGAGGACAAAAACTACAAACTtaaatactatatataaaaaaattatccataCCATGTTAACAA CAATTTTAGGCCCAAGCGTCTTACCCACAatatcgattttttttttatcctttggATTACACCCACATTTTGAcattattttccttatcttAGGCCCAAG + 45771_PtRNAdb chr-7.trna18-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 18 9760492 9760563 His GTG 0 0 63.3 34.30 29.00 Inf His 91.7 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTtAGAATTCTACGTTGTGGCCGTAGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GcattaatagtatatatatttttattttatgagtagttttaataaataatttatttgttgcTTTGTCAACTTCAAATAAATGTACCAACAAAGTAACCTA agtttttatttttattcttcttgCTCTGCGGTAAAATCAATCACAGCCCATAATTTTGATAGAATCATCATGAACGCACATGACCGTCACCCACTCTCTC + 45772_PtRNAdb chr-7.trna19-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 19 10396637 10396707 Gly CCC 0 0 66.0 29.20 36.80 Inf Gly 87.4 Phanerogamae -NA- Dicot GCGCATCTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGaCCGGGGTTCGATTCCCCGGATGCGCA 71 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TGAACCTCTTGTTTCCTACGCAGGTTTGGTTACCTTCTCTATTAAAGAACGACTAAGTTTTATAGTTATATAAATAAGTATGGTAACATTGGATGGTCCA ATTTTCTTcactttaattttcaatttttgctcTCAGCCCAACAACCACTGTTAAATAACATAAGATGTTAGAACTTATTTCCTTTACCTTTGAAAGCCTA + 45773_PtRNAdb chr-7.trna1-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 1 1245821 1245893 Arg TCT 0 0 70.7 50.70 20.00 Inf Arg 91.3 Phanerogamae -NA- Dicot GCACCCATGGCCTAATGGAtAAGGCGCTTGACTTCTAATCAAGCGAtTGTGGGTTCGAGTCCCACTGGGTGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tgaaaacataatattaacaattcaCCAAGTGCGTATTAAAAAACTTTTgttgaatgaattttttatatttaagctTTATTTGTAATATAATGTTTAACGA TGTTTCAAGTTTTGGacattctttttatttgtaagtgactattttttaactttttatgaCTGTTAATATAATGTACCTGTTTTCTTTAAAGGAAAACTTG + 45774_PtRNAdb chr-7.trna20-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 20 10586674 10586745 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTAAACATccgaaaaatattaatattttaaaaattaatcaattttcagaAATCAGTTTTTATCgtgttatttttaaaacaaacacaGCCTGCAAATGAAA ataatatttttaactttcaaTCTCTCCTCTTCTCGAGCGCtgattttcttcttctctgtaattttttaaattacttgaGATCTCTCATCCTGTTTGAAAA + 45775_PtRNAdb chr-7.trna21-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 21 12595546 12595639 Met CAT 12595584 12595595 51.2 35.70 15.50 Inf Met 75.5 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATTCTGAGGTCGAGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 82 >>>>>>>..>>>>.........<<<<.>>>>.....................<<<<...>>..<<....>>>>>.......<<<<<<<<<<<<. ATGCGCCACGATACTCGTGCCACTTTGCATGAAAGTGGGTTGATGTGgattgcaaaattttaaatgccatatagtttaattattattcacTGAACAGACA tttatttttttattcaatttttaaaaaatataaattaaaaaaaaaatttgcactaggaaacaaaatcaaaattattcgagtaatttattttcattaatta + 45776_PtRNAdb chr-7.trna22-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 22 13394500 13394572 Lys TTT 0 0 88.7 64.40 24.30 Inf Lys 93.7 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CACCACCATCAGCGGCCATCCTCGGCTGCCTTTATGGTGGATTCGGTTCTATAATTTTCTAGTTTCCTCGAGAAAGAACTTAAGCAAGTAAGAAACAATT attttatgcttttttttttcggCTTCAAATTTCTGAGACATGGGAGATTTGTGCCTTTTGGGACAAAAGTAGCCTGCTTTTTCTTGATGGAGACAACAAA + 45777_PtRNAdb chr-7.trna23-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 23 13394943 13395015 Lys TTT 0 0 88.7 64.40 24.30 Inf Lys 93.7 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CACCCCGTTTTGGTGGGATTCAGGTTTCCATTTGGTTTGAGGGTTAACTAAAATTGTTTTCTAGGCCTGAGCATTAACTTAAGCTCAATTATACATCAAA gctttttctttttctttctctttttctctcccTGGCTCCAGCCACTGAGATATGAAGGTATTGCATCATCAAAGAAATTAAGAGCTCCCTTTTGCCTTTT + 45778_PtRNAdb chr-7.trna24-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 24 13952450 13952522 Lys TTT 0 0 88.7 64.40 24.30 Inf Lys 93.7 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttaaGTTATCTCAGGATTGGAAAATGAGAAGCTGTGTTAGATTTTTTCCGCTTATAATAAGTATTAATATGAGCATCTTACTCACATCTTACTTGCATCA TTTTATGTCATCTTGTAATGCCAACTTTCATTGCTTGCTTAATTGTTCAAGATTCGGAaacctttgttttctttttctttttcttctccaaaaCCAGAAA + 45779_PtRNAdb chr-7.trna25-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 25 15239304 15239387 Phe GAA 15239341 15239351 71.0 51.10 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>..................<<<<<.....>>>>>.......<<<<<<<.<<<<. AGGTCAAGAATTCGATCCACGCTCACcgcatcattttatattttttcattttcttggcTAAAAACAGATTAGATTCTTTTTTCGCTCTTTCAAAGCACAA ttattttatttttccttcattttctggGCTGGGACAGGTTAGCCGCCTTTTTTGCTCTTACTTTGTAAAGTGCCAAGTCCTGCCCATTTCTAAAGCCCAC + 45780_PtRNAdb chr-7.trna26-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 26 15242932 15243015 Phe GAA 15242969 15242979 58.3 45.10 13.20 Inf Phe 99.9 Phanerogamae -NA- Dicot GCGGGAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATTTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>..>..>>>>........<<<<.>>>>>..................<<<<<.....>>>>>.......<<<<<<..<<<<. ttgaaatatgagTGCCGTCTTCATCTTTTAAAATGAATTGAGCACCTGCAGGCACTATCAATTAAAtgcatacaaataaaataaaacaatagaaGCATAA ttattttattttttccttcataTTTGGGCTGGGACAGGTTAGCCGCATTTTTTGTTCTTACTTTGTAAAGTGCCAAGTCTAGCCCATTTTTCAAGCCCAC + 45781_PtRNAdb chr-7.trna28-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 28 17951213 17951286 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAAAAAACTTATGATGCTTTGGTTGATACTAAATTAAAGGTATCAATCTACTTTTTCCACATACAAATAAGgctattaattttaattctcacTGCACTCT attttatctattttgaaggggtacaaattaaaaataaaatcgccgttgccggggatcgAACCCGGGTCACCCGCGTGACAGGCGGGAATACTTACCACTA + 45782_PtRNAdb chr-7.trna29-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 29 18800776 18800847 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTTCTTTTGACTTCTTATAATATACAAACCCCATTAACCTAGTTCTTCTATCCAATACTttctatataataaataaatattcccCATCTTTTATGTCTAT atttttatttaatctttacgTTTTTAAGCTTAGCTATATCTATATCCAAATTACGTACAGTAAGGCTTTTCTAATTCTTTCTGCGTTCTTTTAGCTATAT + 45783_PtRNAdb chr-7.trna2-Ala-CGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 2 1842993 1843065 Ala CGC 0 0 68.3 44.10 24.20 Inf Ala 99.2 Phanerogamae -NA- Dicot GGGGGTGTAGCTCAtATGGTAGAGCGCTCGCTTCGCATGCGAGAGGcACGGGGTTCGATTCCCCGCACCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACAAAACTATAAACTAGTTTCCATGGGAGTTCCTATCTGGTCGAGATATCAAATAATATgatacaaatttgaaaaatatttaagtaaacGTAATCGGCAC ATCCTTCCTTTTGCGAAGAACTTGCTTCGACAACTAGCTTCTTACAAACTGCAACTTAACCTCTCCCACCCCATTTTACAAGGCTTTACAAGTTGAAACA + 45784_PtRNAdb chr-7.trna30-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 30 18920489 18920562 Ile AAT 0 0 81.8 58.30 23.50 Inf Ile 106.8 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTGTCCTCGTGCTAAGATCTCGCTTTGCAGGTTTTGTTTTAAACAACTTTCAGCTCAGTGAAATActctatttataaataaataattaaattagcaaTCG TACTATTGTTGGGTTTTCCGTTGTTTTCACCTTTTGATAATTGTGGACCATGAAACCCTATGAACCCCAAGATTATTTTGGCCCAAACCGGAGCTGAAGC + 45785_PtRNAdb chr-7.trna31-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 31 23429656 23429728 Arg TCT 0 0 70.7 50.70 20.00 Inf Arg 91.3 Phanerogamae -NA- Dicot GCACCCATGGCCTAATGGAtAAGGCGCTTGACTTCTAATCAAGCGAtTGTGGGTTCGAGTCCCACTGGGTGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. taataataaaaatcaaacatttgTAAATGAATTGATTGGTCAATAGACTCAAGTTTGATTAACAAGTTATTAACTTATAAAAGAAAACTTCTACTCAAGA ttcattattttttttccaattctctttctctttcttttcggTGAGACCAAGATGGTGGCAGAGCTTTAAATGGTGTGCATTGATGACGCACAGCTAGAAC + 45786_PtRNAdb chr-7.trna32-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 32 24599298 24599382 Met CAT 24599336 24599346 64.3 40.80 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>....................<<<<.....>>>>>.......<<<<<<<<<<<<. CTAGTTGACTTTATTGTAGGGAATTTAAgtagtaattaaaattcaaataagacACAAAAGTTACATTTATTTAgtattgttttatgattttaataacaaa ttgtttttttaatttttcggaAATATGAATCCCGAGTAGACAGACAGTAATGGCCGTCCGTCAAAGCCATATAATTTTTCTCGCCACCTGGCGATATATT + 45787_PtRNAdb chr-7.trna33-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 33 24956419 24956486 Thr TGT 0 0 52.3 30.40 21.90 Inf Thr 56.8 Phanerogamae -NA- Dicot GcTTAGCTCAGAGGTtAGAGCATCGCATTTGTAATGCGATGGtCATCGGTTCGATTCCGATATGccCA 68 >.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<....<. taattcatattaattatGAATAACTAATAGATAGTTAATAGATAAGATCCTAATAGTTTGCTGAATCCCTATGGATACCAAATTTCTATTATTTGAGCCC GTCGATTGGAATTGAAGAAATTCTGTCCCAATTGTTACAAAGATACAATTCACGGGgagataaagaaataaatcgaaTCAAGTGCTCGTATGTCACCACT + 45788_PtRNAdb chr-7.trna34-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 34 27517447 27517517 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. taagggcTGCATTGCACAGAGAGTgtattttgtttactttaatGAAGGTCaaatatttagttttatatattaaaagtattttgcaCCCCCTTGCAACGAA TTACCGtaactttgataaattttgctTCTAGCTCCATCTTCTTTgttcttatttatattttctttatccTGTTTTTGCCCAACCATAAAATTAGAAGGCT + 45789_PtRNAdb chr-7.trna35-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 35 27518486 27518556 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tttcttaagaaaaattagGGCACATTTCTCAGGGGATTGCATTTtgtaaataaagagaaaatctttactatttttattgaTAGCTCCCCTTCGCAAAGAA ATATGAGAGCTTTTCGGGCTCCAATTTTTTCCTCTTTATCTCATTTAACAATGAAATGCAGAGCATTGCAGCTCTTGTGCCATTTTCAGGAACCCATTTT + 45790_PtRNAdb chr-7.trna36-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 36 27745081 27745158 Glu CTC 0 0 43.3 26.80 16.50 Inf Glu 54.3 trunc_start:1 Phanerogamae -NA- Dicot CCGTTGTAGTCTAGTTGGTtAGGATACTCGGCTCTCACCTGAGAGaCCCGGGTTCAAGTTCCGGTAATGttttgcttA 78 .>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<......... GCATAATGTTATCTTTTGCAAACCCTGCTTACCACCCTctaaaaatgacaaataattaataaatagataaaaaaaataaaaatagtctTACATCATCAAT ttttgttcttttttcccattttgcttgcttttatttttgtttgtttgtttttttttctcattttgctTGCTTACTTTGTTACTGGTATGGGTTTTTGTTA + 45791_PtRNAdb chr-7.trna37-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 37 28217094 28217167 Met CAT 0 0 40.0 34.80 5.20 Inf Thr 46.8 IPD:-35.40 Phanerogamae -NA- Dicot GCATCCATGGCTGAATGGTtAAAACGCCCAACTCATAATTGAcGAATTCGTAGGTTCAATTCCTACTAGGTGCA 74 >>>>>.>..>.>..........<.<.>.>>>.......<<<..<.....>>>>>.......<<<<<<.<<<<<. TGTCCTTTCATTGATTCCTCCTAAATTGCATTGATTTATCctaaaagatttaatttcaattgGAATTTGGTTATTCACCATGTACGAGGATCCCCGCTAA CGCCAATGGAACCCTCCAATAAGTCTATTGGAATTGGCTCTATATCAATGGAATTTCATCATCTATACATAACGAATTGGTGTGGTATATTCATATCATA + 45792_PtRNAdb chr-7.trna38-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 38 29790188 29790270 Ser GCT 0 0 51.8 26.30 25.50 Inf Ser 78.8 Phanerogamae -NA- Dicot GTTTTCTTtGGCCGAGTGGTtAAGGCGTGTACCTGCTAAGTACATGGGGTTTCCCCGCGAGAGCTCGAATCTCTCAGGCGACG 83 >>>.>>>...>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<.<<<. gcattaaattaatttactagTTGAAGGGCCAAACTGTACAGAATCCCTTTATTGGTAGCTAATATTATTGTATTACAACTAAATACTTCACTTCATCTTG TTTAAAGTTTTGTCGAAATCCAGTGTTGCCAAACTTTTAGCACCCCAATGCAAGATGACATGATCCCACAACTTGGTCATGCCTGACTGGCTTGCCCCAT + 45793_PtRNAdb chr-7.trna39-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 39 44344850 44344922 Ile TAT 0 0 45.1 39.20 5.90 Inf His 41.0 IPD:-12.40 Phanerogamae -NA- Dicot ACCGGGGTAGAGTAATGGTtAACTCGTCAGGCTTATAATCTGTAGAaTGCAGGTTCGAATCCTGCCCCCGCCT 73 ..>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<... CTATACAAGGCCGCCGCTTACTAAGCGCTGGTTCTATCCCGACCAAGCAACCAAAGCCAGGAACTTAGGTGGGAATAGTGAAAGAAAGTGAAGGGGAAGA AATTACGTCAGATACTTGATAGAGTCCTGCTCGTGAATCGGGGTTCTCAATAGAGGAGAGTAAGACAATAGATGGAAAGAAGACCATTGGATAACAATAA + 45794_PtRNAdb chr-7.trna3-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 3 2167285 2167356 Cys GCA 0 0 81.5 59.30 22.20 Inf Cys 105.9 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGTGGtCACCGGTTCGAATCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GATTCTTTTTCTTAATGGTAGTTTTTGGTTTGTGTTTGAaccaaataaacttaaaaatgaatattttatatctaGTTTTTGTTTAACTTTTAAGTTGACA GCTCCCCtagggtgttttttttttttttttttcaattttgggcTATTTTATAAGACATGTAGTATAAAATTTCCAATCAGATTGGAGCTTCTAAGCCAAA + 45795_PtRNAdb chr-7.trna40-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 40 47103861 47103940 Leu TAG 0 0 36.6 20.80 15.80 Inf Leu 70.8 Phanerogamae -NA- Dicot GGCAGTTTAGCCGAAAGGTctAAGGCGCCAAATTTAGGCTCTGGTCTGAAAAGGCGTGGTTCCAAATCCCACAGCTGTCA 80 >>>>>>>..>>>...........<<<.>>>.>.......<.<<<.>>....<<..>>>>.........<<<<<<<<<<<. atttgttacaattttatatataaaatttaaatgtgatacatatatataaactttaattttaattcaattatacatatttaaataaataattacatatcTC AAATTTtccatcaaaagaaaaaaagaataaatacatacatacatacatttatttttatatttaataaatatatcaacataaaataatgataagttgataa + 45796_PtRNAdb chr-7.trna41-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 41 47608401 47608471 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. taatatttaaggtGAAATCTTAGACAACCTTTTTTGGAGTAGAAAAGATGAATAGTGTTTGATCTGCTACTAAaagtaaatgaaacaaaaagtTCAACAA AATGTTTGGAGCAATGAAGAGAAATGCGCTCTTGTGTTGGCTAGGGTCCATCACTCTATCTGATCCAACGATTAGAATTTGCGAACCTGAGCTCCTCTTT + 45797_PtRNAdb chr-7.trna42-Pro-CGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 42 48258223 48258292 Pro CGG 0 0 26.6 13.20 13.40 Inf Ala 38.8 IPD:-1.10,trunc_end:13 Phanerogamae -NA- Dicot GGGTATTTGGTTTAGTGGTATGATTCTCGCTTCGGATGCGAGAAGtCCTGAGTTCGATTCAAAATACTTT 70 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<......>..>.......<<.<<<<<<<. atcaatgtgaagtctataatgccactaagtcaataaatataatttccaaataattatatgccATATTAGCTTCAGGAAATATGTCAAATCTTCAAATACA taaaacccTTTTAACAAGAGTTTTGCCTAATCAATTAACTACCAAGAATAATTGTCTAGGTCATGTATAGAAACAGgcctatactaaatatatcaataaa + 45798_PtRNAdb chr-7.trna45-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 45 48564221 48564291 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tatatcatttgaaaTGTTCCCGTTGGTCTAAATCTATTACAATTGTCTAACGCCTTTaagtgaaaaaatatataaatttctcACACGTGTAGCCAGCGAA TGCTGTTGGAGCAATGAAGAGAACCGCGCTCTTGTGATGGTAGGGTCCATCACTCTCACCGATTTAACGATGAGAAACTGCGCATCTAAGCTTcttcttt + 45799_PtRNAdb chr-7.trna46-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 46 48565860 48565930 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. caaagttaatatattatttgaaatgtttCCATTGCTCTAAATCTATTACAATTGTCCAACGTGCTTAATATAAAAATGGGTAACAATTCCGGCCATCGAA TGCTGTTGGAGCAATGAAGTTAACTGCGCCCTCGTGATGGTAGGGTTCCATCCCTCTCAACTATCTAACGATGAGAAACTGCGCACTGagcttctttcat + 45800_PtRNAdb chr-7.trna47-Ser-CGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 47 51376108 51376188 Ser CGA 0 0 40.7 25.80 14.90 Inf Gly 49.8 IPD:-40.00 Phanerogamae -NA- Dicot GCCTTGGTGGTGAAATGGTaGACACACGAGACTCGAAATCTCGTGCTAAAGAGCGTAGAGGATCGAGTCCTCTTCAATGCA 81 >>.>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<.<<. TCAATCAATAGAAATACTCCAATACTCTACCATTGTCATATATTCCATACATTACACTAGATAGATATCATATTCATGGAATATGATTCACTTTCAAGAT TAATATTGAGAATGCCCATTGAATTGGAATAAGTTTGGTAGCGGGTCACGAGATCTTGGTGATCTTCTTTATCTAATGAATGGGGGAGTCCGCTTTGACA + 45801_PtRNAdb chr-7.trna48-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 48 51748246 51748319 Thr AGT 0 0 75.0 46.80 28.20 Inf Thr 89.8 Phanerogamae -NA- Dicot GCTTTCGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACGAAAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAATTTGGTACGATAAGCCTGGCATTTGATGATATGAGCATTGTcatttggttaaattaatttagaatatCAAGTTTTGTTGAATTTCAGGTAGCCCACA AGTATCACCTCATTGTATTGAACAGAACAAATAAAACCTTGTACTATATGATGTAGATCCTTacctaaaatttgaattatgacATCATGTAGTTGGTTGT + 45802_PtRNAdb chr-7.trna49-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 49 51768436 51768509 Thr AGT 0 0 71.5 47.20 24.30 Inf Thr 84.5 Phanerogamae -NA- Dicot GCTTTCGTAGCTCAGTTGGTtAGAGCACTCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACGAAAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGACGTTGGCATTCTACCTAATTTTCCGCTCAGAATTTGGTACGGTAAGCCTGACATTAGATGGTAATACCAACTTTTGTTGAACTTCCGGAAGCCAGCA AGAATTTGAGAGCCTTTTTCCCCCCAATCTGATCATCTAACGGTCTTATACAATGCCCCATTTGAATTGAACAGATCATATAAAACCTTTTAGTATATGA + 45803_PtRNAdb chr-7.trna4-Ser-GGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 4 2547418 2547504 Ser GGA 0 0 27.0 16.00 11.00 Inf Ser 30.6 Phanerogamae -NA- Dicot AGAGAGATGGTCGAGTGGTtcAAGGCGTAGTATTGGAATTGCTATGTAGACTTctgTTTAcCGAAGGTTTGAATCTGTCTTTTTTCG 87 .>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>.......<<....>>.>>.......<<.<<<<<<<<.. gttacaTTTctagttataatttatattaatcatacttatcaaacaatttaatatgGATAACTTGCCATTCGTTTGGGGTGTTGGCCGTAATAATTATGTA TACCTTCACCTAATTCgcttatgttatatatatataggtaaactattaaaatagtcactgtTGTTTGCCTCGggttatattttggtcacttatgtttaaa + 45804_PtRNAdb chr-7.trna50-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 50 54599254 54599337 Leu CAA 0 0 78.5 55.10 23.40 Inf Leu 119.0 Phanerogamae -NA- Dicot GTCAGGGTGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.><.<<<...>>>>>.......<<<<<<<<<<<<. GATTACCAAAACAAACTTACTTCGCCCAATTGATGGcatataacattttatttaatttattaaataatatgcTTAACATTTAACAAGCAAAAGACATTCA tttctaatattttatttatttatttttgataattttatttttcatgccatcctattttacttttatatcaACCACTTTCTCCATTTTTATAAccatttct + 45805_PtRNAdb chr-7.trna51-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 51 54602667 54602750 Leu CAA 0 0 71.1 53.40 17.70 Inf Leu 110.6 Phanerogamae -NA- Dicot GTCAGGGTGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGgCGTGGGTTCAAATCCCACTTCTAACA 84 >>.>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.><.<<<...>>>>>.......<<<<<<<<<.<<. ACTAGTGATCCGAAGGGAGCCTAAACCAAGTGGATTAGATTATCCAAAACCAACTTGCTCAATTGATTGATACATATGCAACATTTGAGTTAACCATTCA TTTgctctattttatttatttagataattttattttccaaatcaaccatatctctattttatttttcaaatcaaccatttctcttctttctcccctattt + 45806_PtRNAdb chr-7.trna53-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 53 56669629 56669700 Glu TTC 0 0 74.3 46.90 27.40 Inf Glu 98.8 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATACTTGGCTTTCACCCAAGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aaaaaagttaacaacCCATCCACTAAAGCAGATTCATTGTGTTccttcataaaaataaaaaatgttgttATCAAATTATGTTTTGACCATGAGCGTCAAC ttcttttttattttttaatatgctAAACCTATattgttttttgtatttttttcaggttaaattatcaaaatagttacttttatttgcttcatattacatt + 45807_PtRNAdb chr-7.trna54-Pro-CGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 54 60051207 60051278 Pro CGG 0 0 68.9 36.30 32.60 Inf Pro 111.3 Phanerogamae -NA- Dicot GGGTGCTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAGCACCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ctataccatatcttttaataatttataatataaatgtttatatttcTACTTGAAAAGcttataagttaaaaataactTTACCAGGAAGTTATCAACAACT TAcagtaaaactttttttttaaaagggaaaaacGGCAAATTTAAGTTGTCGTTTTGAAAACGGGGTGCGCAATGCGCTCAGATTACTTTTCCCTCCATTA + 45808_PtRNAdb chr-7.trna55-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 55 60531970 60532043 Ile TAT 0 0 56.8 35.50 21.30 Inf Met 65.9 IPD:-24.00 Phanerogamae -NA- Dicot CGCGGGATAGAGCAGTTtGGTAGCTCGCAAGGCTTATAACCTTGAGGtTATGGGTTCAAATCCTGTTCCCGCAA 74 .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.. CCCCTTTACCATTCTGTATAAATAGGCTATTCTATTTGTACATATATGGAAGAAGGGATCATTCAATCTTTGTTTGTCCATTAATTTGGTTTCTTTCCAT cattacatttttttgacaaaaaaaattaaacttaatcctATTAACTAGTCATTTTTTCTGTTAGGGGTGTATTATATTCCAATTCCAGTCAACTATTTAC + 45809_PtRNAdb chr-7.trna56-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 56 60748765 60748837 Lys TTT 0 0 89.6 66.00 23.60 Inf Lys 96.4 Phanerogamae -NA- Dicot GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGtCGTGGGTTCGATTCCCACAGACGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AATTCCTTGAAGTAAAAGTGGGGATTAAAAGTAGGGTAGGAGGACTTGGAGCATGTTTTAACCTTTTGAATATTGTCCCTTATGTTTCATTCTCAAAGTT ttctttttgtttttcagttTCAGTCATTCACGAATACAAATGAAAGACGGCGTCGTTCACAGAAGACCTGGATTAAACCCGGTTCAGGCCCATTTAACCG + 45810_PtRNAdb chr-7.trna57-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 57 60406119 60406037 Leu TAA 0 0 69.7 31.30 38.40 Inf Leu 92.9 Phanerogamae -NA- Dicot GCAGGTTTGCCCGAGAGGTtAAGGGGGAAGACTTAAGATCTTCTGCACATAAGTGCGCGTGGGTTCGAACCCCACAGCCTGCA 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. tgtttttcttggttCTGTTTGTTGAAGGTGTTTTGGAGAAGATGGTggtaattaaattatagtaataaCATATTAATTTGTGTAACACATCAAGTAACTA atttttgaaaaagatttattttattttattatttaaaattttattttattattttataaagtgtaaagttttgtttttttcgtgaaaaaagataaattta - 45811_PtRNAdb chr-7.trna58-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 58 59363527 59363466 Cys GCA 0 0 50.3 35.40 14.90 Inf Cys 70.8 Phanerogamae -NA- Dicot aATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACAGGTTCGAACCCGGTTGG 62 .>..>>>>.......<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<.. TAGCTATAGatgaatatataataatattttattatttttaaaatttaataatatgatattacataatatacaaataaattaataggTGAGGATACAAACA GCCCTAAcgtttatgaattttaatttttaaattattcagaTGACATCATCACATAACAGATAATGAGTAGCTGGAAGTCTCAACCGAGAGCTTTTTTCAC - 45812_PtRNAdb chr-7.trna59-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 59 59185365 59185294 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CCGTACACGCGGTTACGATTTGTACGTTTATTGCAATTAATtggatttcttttcttttgaaattattgatattaaaatatgtatacaaCCCACCAACAAA ttatattttgtttatttcattttacatTGATTAAATTATGCTACTAGTCCTTGCACTTTTACGaaagttatggatttaatccCCAGTGatggaaataaat - 45813_PtRNAdb chr-7.trna5-Leu-CAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 5 2548756 2548836 Leu CAG 0 0 69.5 46.80 22.70 Inf Leu 109.7 Phanerogamae -NA- Dicot GTCAAGATGGCCGAGTTGGTctAAGGCGCCAGTTTCAGGTACTGGTccgaaaGGgCATGGGTTCGAATCCCATTCTTGACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. gttatataaatatttttataggaaggcatatttccatttttatcgTCAAAAGTGGGATTTTGACTGTAATTTCGTTTccataacataattaaataaacct gaatattttaaaatttaaaaactaattaaaatggAGCATGGGCTTTGACCCGCAAAAAAGCTTATAAACCCAATAACTATTTAGTTTATCCTCTTTAAAC + 45814_PtRNAdb chr-7.trna60-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 60 57835962 57835891 Cys GCA 0 0 82.1 59.90 22.20 Inf Cys 106.6 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTATATTAAAGTCATAAaaccaattatataataaagcgACAATTGACTTTTTGGATCAGATTACAGATAATATAGTAATATATTGTAATATAACCAAATT TTCAATGttgtaaattttgttgtttctttcaCGCATGTTTCCAACAATTCATAGTTTCATACACTGGCTGTTAATTTTCtgcaaaagtaattaaaaaaat - 45815_PtRNAdb chr-7.trna61-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 61 57463959 57463888 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. atttgctcaatatTGAAATCAAGAGGGGCTAGAGAGGTCATTTTACCTATTATCCATAGTTAGTATTTTTCAGATCTGtctatatttcaaatatcaacTA ACCAGAGAGGCttcctttgaaatttttcatttcaatttttttctgggccGGGCCGGTTCACAAATGTGGGCCAAGTGTAATGATTAGCTTTCTAATACAC - 45816_PtRNAdb chr-7.trna63-Glu-TTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 63 51216007 51215936 Glu TTC 0 0 72.0 46.80 25.20 Inf Glu 98.7 Phanerogamae -NA- Dicot TCCATTGTCGTCCAGTGGTtAGGATATCTGGCTTTCACCCAGGAGaCCCGGGTTCAATTCCCGGCAATGGAA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AGGCTTATGCTGGTTCGATCGAGGTAGCGTCCGCGACGGCCGGGTGAACTAGGAGCAGCTCTTATAATATCTATTATATTTGGATAAAAGTTCTCGGTAA ataattttgttttattttttcctctttcctttttaatgtttttctttaattttttacattttttaaatcattattcTACATCTCCATTTTTTACATTTCC - 45817_PtRNAdb chr-7.trna64-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 64 51092706 51092634 Glu CTC 0 0 52.9 44.20 8.70 Inf Glu 70.2 Phanerogamae -NA- Dicot TCCATTGTAGTCTAGGTGGTtAGGATACTCTACTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>.>>>..>>>>.........<<<<.>>>...........<<<....>>>>>.......<<<<<<<<.<<<. CAACATGGAGGCTTTCAAGCATGGGGCAATTAAAGGATTTGCTTAGAAGAAGCAAGAAGATCAATAAGAAGTTGCTATACCTGCTATACCTATCTCAAAA tttctttttaaaattggacCAATTTTACTTTTTCGCCCTTCAGGCTTTATCTGGTCTGTTTGTCTTTGTAGCTAATTGTATTATTGATTAAACCATTTTT - 45818_PtRNAdb chr-7.trna65-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 65 50846565 50846493 Ala AGC 0 0 49.4 30.70 18.70 Inf Ala 80.2 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAAAGCGCTCGTTTAGCATGCGAGAGGtACGGGGATCAATACCCCGCATCTCTA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAAAGTAAGTGATTTTTATATACTTGAAAAAGTGTTGCATAATCGCATCTTTAATTCATATGTCACGACATATAGATTAACAGAACACTAAAATTGTAAA TATTTTACAGGACCATGTCCCTACTCTTTTGTTTGgttagttttatttttccatttttgggTCCTTTGAGCTCTGATTCTGCTTCATTTTCGCTCTGAAA - 45819_PtRNAdb chr-7.trna66-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 66 48419652 48419582 Gly GCC 0 0 62.9 44.80 18.10 Inf Gly 83.6 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAATACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<. AAATCTGTTTCAAATAACAATCTGAAAtatctttcaaaaaataaatctaatgcGTTTACacaaaaaagtatataaaatgttaaaacacATAATCATCGAA TTCTGTTGGAGCAATGCCAGATGCGCTCTTGCAATGGTAGATGTCAATTTATTTGTGCAAATCGTTTGCATGTAAGttgatgaataattgattttttcta - 45820_PtRNAdb chr-7.trna67-Arg-GCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 67 42507278 42507207 Arg GCG 0 0 43.2 30.70 12.50 Inf Cys 49.4 IPD:-44.60 Phanerogamae -NA- Dicot GGTGACATGGCCGAGCGATAAGGCGGGGGATTGCGAATCCCTTATTCCCCAGTTCAATTCCGAGTGTCGCCT 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>.>.>.......<.<.<<<<<<<<. AGATATTGTGTGTCTAGAGATACTATAACCAATTGAATGTATGGATTcgatctaaaaatgaaaaataaaagggagatactctttttttttgtagcCTTTT GATCAACAAAAAACTTGAAATCCTAACGTCTCTTAACATCTCCTAACGTCTAGGATtcaaggaaaaactaaagtagTGGAAGGGAATCAATAAATCTTTA - 45821_PtRNAdb chr-7.trna68-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 68 39429363 39429284 Leu TAG 0 0 30.9 19.20 11.70 Inf Thr 34.1 IPD:-34.10 Phanerogamae -NA- Dicot GCCGCTATGGTGAAATCGGTaGACACGCTGCTCTTAGAAAGTAGTGCTAGAGCATCTTGGTTCGAGTTTGAGTGGCGGCA 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>..<<<..>>>>>.......<<<<<<<<<<<<. ttaaatgcttCCTaacaaatttgagattttacaTTGAATTGATCCCTTTACCTGCAATCTCGACGATTGACTAAAAAAGGGTTATTATGATTTTGAGCAA TAGTATCTTCTAAAAGAGATAGAATAAGTCTTGCAATGAAAATGAATTTCATTCATGATTTCCATTCCATAAAATCGAGAAACCCAGgcttttttcataa - 45822_PtRNAdb chr-7.trna69-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 69 32575301 32575229 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. gttttttttatcaatgtctAAATGGAGAACAAATTTGAACTTAGCATAACATTGGAGACACTATAAATAGTATTTAgagttttaggaaaaaaattcatcA TATGttctaaattttcaatattaatctTTAGTTTTCGGGCCTctcattttcaatatttttgggCCCACTCCCATATTTAATGGATTTTGGGATACATTCT - 45823_PtRNAdb chr-7.trna6-Leu-CAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 6 2550342 2550422 Leu CAG 0 0 69.5 46.80 22.70 Inf Leu 109.7 Phanerogamae -NA- Dicot GTCAAGATGGCCGAGTTGGTctAAGGCGCCAGTTTCAGGTACTGGTccgaaaGGgCATGGGTTCGAATCCCATTCTTGACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. tgtaaatatttttattggaaGGTGAATTTCCATCTGTATCTCCAAATATAGGACTCTGTTAacgataaaaaataaactattacAAAGAATATACAGTTGT gagaattaaaatttttataaataaatcgtAAATGGATCAGacagagaattaaaatttttttataaataaatcgtAAATGGATCATGTGCTTGAATCCGCA + 45824_PtRNAdb chr-7.trna70-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 70 29444965 29444892 Arg CCT 0 0 32.0 23.00 9.00 Inf Thr 48.9 IPD:-2.10 Phanerogamae -NA- Dicot GGaGCCTGTAGGTCACTGGAtGGAGCGTTTGTTTCCTAAGCAGAAGGtCATAGGTTCGACCCCTATCTGGCCCG 74 >>.>>>.>..>.>>........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. TTCCACAATCTCAATTATAATATGGCATAGTCAATCTCCTTAAAAGAGAAGTGGTAACAgttatttctattatatattGATAGACGCTGACAAAGCAACA aaatcatttttatttttttaaatgtatctGAATAGTCCCATTAAACTCCAAATTGGCCCAATATTTCCAACAAAAAGTTGTCAACCCAATTTTACTCATA - 45825_PtRNAdb chr-7.trna71-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 71 25511081 25511000 Ser AGA 0 0 77.1 42.80 34.30 Inf Ser 110.5 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. aaaaatgtCTCAAAACCtaactataatatatatttaatttcgtAAAACATAATAAAGTATATCGTTGAGTTATATAAAAATGGAACATTGCTATCATACA tattagtttatttaattatgtaacttttgcTTTCTGTTACTTATTATCCTTTATGGGCCACTTAATCCTTGGGCTATTCTCACAGTTTCGTGTCATTGCT - 45826_PtRNAdb chr-7.trna72-Ser-GGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 72 24488177 24488090 Ser GGA 0 0 36.4 13.80 22.60 Inf Ser 40.7 Phanerogamae -NA- Dicot GGAGAGATGGTCGAGTGGTtcAAGGCGTAGCATTGGAACTGCTATGTAGACTcTTGTTtACCGAGGGTTaTTAATCCCTCTTTTTTCA 88 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<....<<.>>>>>........<<<<<<<<<<<<. gtaatttttctaattaagtttGATATTGTTCATACCTATCGAACAATCTAATATGAATAACTCGCTATTCGCTCGGGGTATCGGCCATAATAATTATGTG TACCTTCACCTAATTCGTTTATGCAATTGACTACAatgtatcaaatcaaataaGAACATATATTAAAGAATTAGACGTTTTTTAGTATAGGTACTCAATT - 45827_PtRNAdb chr-7.trna73-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 73 22092280 22092208 Lys TTT 0 0 80.9 62.10 18.80 Inf Thr 78.4 IPD:-3.70 Phanerogamae -NA- Dicot GGGTGTATAGCTCAGTTGGTAGAGCATTGGGCTTTTAACCTAATGGtCGCAGGTTCAATTCCTGCTATACCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAATAGAGCTATGAAGTTAACGTTCGAGTGCTATAGCCAATAGCCCCCTCACTCTTCCTCTTTTCCGCACCAATCCTTATTTACTACTACATCTTTTTTT AACCTACCTTACGCTATACTATTAGTAAGGATGCGTAGTAGCGTTCAAAGATCACTCTTTGGCCTTTAGACTCGCTTCAGCGACTTCGCCCTTTAAGTGA - 45828_PtRNAdb chr-7.trna74-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 74 21858653 21858580 Ile AAT 0 0 79.3 55.80 23.50 Inf Ile 104.3 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCAATGACGAATCTGTCTTTCCACGTGTATGAATTATTGAACTGTTATACGAAATCCTGTAGCCTcttgatttatataataaaatctcATTTTCCATCAA ttatcattattttatgattttacttcTCTTCTAGTTTGGGTTGGGCTTGCTACTTTGGACACTTTTTACATCCCAGTCGGAACCCAAACACGACAGAAGC - 45829_PtRNAdb chr-7.trna76-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 76 17952033 17951941 Asp GTC 17951996 17951978 30.3 24.20 6.10 Inf Asp 58.3 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTGGATCCCCTGaaCGGCGATT 74 >>>>>>>..>>>>........<<<<.>>>>>..........................<<<<<....>.>>>.......<<<.<..<<<<<<<. CCATGAAACCAGACAACTTATTTTTGTTCCTTGAAATGTAATAAACTTATGcatactcatatttttttaaaaacaccagttgttataaattaataacgAG ttaatcttattatacCTTTCAAAATAGGGAAAAGACAGCCAACTTATTTTTGTTCCTTGAAATGTAATAAACttatgcatatttatattgttttaaaata - 45830_PtRNAdb chr-7.trna77-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 77 17951815 17951723 Asp GTC 17951778 17951760 30.3 24.20 6.10 Inf Asp 58.3 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTGGATCCCCTGaaCGGCGATT 74 >>>>>>>..>>>>........<<<<.>>>>>..........................<<<<<....>.>>>.......<<<.<..<<<<<<<. AGGGAAAAGACAGCCAACTTATTTTTGTTCCTTGAAATGTAATAAACttatgcatatttatattgttttaaaatatcaGTTGTTACAAGTTTGCAACGAG ttaatcttattatacCTTTCAAAATAGGGAAAAAACAGCCGACTTATTTTTGTTCCTTGAAATGTAATAAACttatgcatatttatatttttttaaaata - 45831_PtRNAdb chr-7.trna78-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 78 17951597 17951526 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 94.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AGGGAAAAAACAGCCGACTTATTTTTGTTCCTTGAAATGTAATAAACttatgcatatttatatttttttaaaatagcaaTTGTTACAAACTTGCAACGAG attttaattttattaacctttCAAAATAGGGAAAAGACAGCCAACTTATTTTTGTTCCTTGAAATGTAATAAACttatgcatatttatattgttttaaaa - 45832_PtRNAdb chr-7.trna79-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 79 17951398 17951327 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 94.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AGGGAAAAGACAGCCAACTTATTTTTGTTCCTTGAAATGTAATAAACttatgcatatttatattgttttaaaatatcaGTTGTTACAAGTTTGCAACGAG attttatttttaatttgtaccccttcaaaatagataaaattggCGTCGCCCGGACTCGAACCGGAGACCTTCAGTGTGTTAGACTGACGTGATAACCAAC - 45833_PtRNAdb chr-7.trna7-Asn-ATT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 7 2609239 2609315 Asn ATT 0 0 25.5 11.50 14.00 Inf Ile 29.6 IPD:-24.30 Phanerogamae -NA- Dicot TTGATTTtacTAGCTTCGTTGGTtGTAGCTTCATGCTATTAACATGAAGGtTGTAGGTTCAACTCCTGTAGGCCAAA 77 >>>.>>>.....>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<. ctagaattaaattttttttttctaaatccgAAAGTTAAAATATTCTCATCTAACCAATAGACAAAACcttcatatatttgtttttataccAACAAAACAA taatttatttttatttttattttttatctttggcGGGACAGAGGTTGTGGAGGCAAAGGTAGGTGCACGGTCTGCCACATTGTCCACGGCCTATTGATAC + 45834_PtRNAdb chr-7.trna80-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 80 13216197 13216124 Asp GTC 0 0 36.2 28.10 8.10 Inf Ile 35.3 IPD:-22.10 Phanerogamae -NA- Dicot GGGATAGAAGTTCAATTGGTcAGAGCACCGCCCTGTCAAGGCGGAAGcTGTGGGTTTGAGCCCCGTCAGTCCCG 74 >>>>>.>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. ttttataggctaaatttgtagATCACATAAAATCTAAATAGAAAATGGCTTGAATGAAATCATAAGACTATCTATGTTGTacacttttctttatttcctt acggataaaatttttaaaatacatcaattgATCCCTCCGTTTTCTGTCAAAGGGGATACAAATGATAGAATTTCATTCCCAACGatatctttatcttttt - 45835_PtRNAdb chr-7.trna81-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 81 13209100 13209019 Ser TGA 0 0 81.2 47.30 33.90 Inf Ser 117.6 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTTGAAATCTGTTGGGCACTGCCCGCGCAGGTTCGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AATTTCCTTTAATGTAATTTCCGTATAACGTCTATTCTggttattattcttattttctgtgatgattttaaagttttagttTTGGAAGTCCTACCAAGCA atctttttaattttttcccgCCATTTTCtactatttaaatatataaaatcttatcGACCTTTGATATTTgcactatttttttcttaaatataagACAATT - 45836_PtRNAdb chr-7.trna82-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 82 9396551 9396479 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. TTAACCGAAAAGTAATCATCGACGCCGTCTATTTATAGaactcaaattaaattaaaaaagattaaaataataattttaatatgctAACAATAATCGTCAG ttttaataattttcctaTTCCTTCCATAGGCAGACTCTAGCCCATTTTAAGCCCACAATATCGACCTTTTTCTGCTTCGGAATTTGAATTGGGCTAAGCC - 45837_PtRNAdb chr-7.trna85-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 85 5713499 5713427 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGATATTTTGTCAACCGTCCCAACTACTTTACGGGGATTGGCCTTCAACCGAAatgatttaatattatttataaaacatCTTAACAGCATTAAGCAGCA TTTACTTATacattgtttttaaattttggtgaagTAGCTCCGGCGGTTATCTGATCTCTCTTTCCTGAAATTTCTACAATCTGCAAGCAAGCAAGCTATC - 45838_PtRNAdb chr-7.trna86-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 86 5070081 5070010 Gln TTG 0 0 74.2 54.70 19.50 Inf Gln 105.6 Phanerogamae -NA- Dicot GGTTCCATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTGGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TAATTGGAAATGAAAGAGGAATCAACGTTCTTCAACGAAAATGTTATAATGCCAttacttataaattttatatataattaaagtacATGATGCCCAAAGG TTTTACCTTATTTATGCCCCTTCACTTTTCCATTCTTTATGCTCTCTTTctgtgaaaaaaataattatacatatgtaAATATACATGACATGAATCAcga - 45839_PtRNAdb chr-7.trna87-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 87 4353576 4353505 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTGCTATGTAATTTAAAGACATTAAACAAGACAAGTAGATTTTGATTGTTTCCTATGCTATAGAGAATAAGTATTCTTAATGTTGAAACGCATCACCCGC AATTCCCGATCAAAGCGGCtcctttttaagttttttaaacttttgCTGATACTATCGATATTCATAAAAATGCCCCTAAAATTtcccccttttttaaaat - 45840_PtRNAdb chr-7.trna88-Ala-CGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 88 4170819 4170747 Ala CGC 0 0 68.3 44.10 24.20 Inf Ala 99.2 Phanerogamae -NA- Dicot GGGGGTGTAGCTCAtATGGTAGAGCGCTCGCTTCGCATGCGAGAGGcACGGGGTTCGATTCCCCGCACCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACGGTGAGTTGACCATGAGCTAATTGGAATAGGGATTGAAGTTTGTccaaattttttggttttatatatGATAACCTAATATTGAGATAGAATATCATCT AAGCAGTTTTcgcttttataaaaatcatCTTATCTAATTTCATAAAGCTAGTGTTGTTAGGCTTTTTTGTTTCCTCGTTTATGGGATAACATATTTTCAT - 45841_PtRNAdb chr-7.trna89-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 89 4159385 4159313 Arg CCT 0 0 69.9 58.90 11.00 Inf Arg 75.6 Phanerogamae -NA- Dicot GCGCTCGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAGGcCGTAGGTTCGATCCCTACCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. ACAAGTTACCTGTAATAGGACTAGAAAAACCATAAACTAGTGTAGGAAGTATAATGAACTAGATAATGAATAGATTATTTAGTTAGCCGATAGAAAACAA tatcctttttttttttccacagAACAATGCCCAAAAATTGGCTCAACCAAACTCTTTTAGGCCTGGAGGCattatgtttgattgaatctcaAATATTGCA - 45842_PtRNAdb chr-7.trna8-Ser-TGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 8 2978314 2978395 Ser TGA 0 0 81.2 47.30 33.90 Inf Ser 117.6 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTTGAAATCTGTTGGGCACTGCCCGCGCAGGTTCGAACCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. aatattaaaaataaaaagttagatAATGGGCAATATCGAGGTACGTAATTGATTATGAATCGAATTTAAGTTTTATACAGAAAGCACATTTCAGCGCCTT ttttttttttactacttttatttcattatttatttttcctttttccactTTCTACGTTCAAAAAGAAGTCCTTGTTGAGAAAATTGGAAGAAAATTCCAC + 45843_PtRNAdb chr-7.trna91-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 91 2075039 2074968 Trp CCA 0 0 71.2 46.60 24.60 Inf Trp 100.2 Phanerogamae -NA- Dicot GGATCCGTGGCGCAAGGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. attttcctaaaattacttttatcaatttaatataattaaattagctTTCAAGAGggcaattttttaatatatataaacattcaATAAAAAAGATATCAGT AAATCCCATTCTAAACGGgtattttgggttttttcttTCACGTTCGGGTCCATAAACCTCGGATCCGGACAAAATATGGATCTTAAAATAAGCTCGTAGG - 45844_PtRNAdb chr-7.trna92-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 92 1759435 1759364 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAAGAGATAAGTACTTAAAAAGTAAACGAGTGAGAGCGACAGCTGAAAGGATATTGGatatttatagttaaataaagatatttgtaaaatatagtCAATA TTAGAGTTTTCTGCTGGCCATATAAATTTTAGTCCCCTTTACCTTTCTTATTGAATATTggccaaaatttcttttaagccCCTTCACTTATTAAACCTTT - 45845_PtRNAdb chr-7.trna93-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 93 1286789 1286710 Leu TAG 0 0 69.5 48.50 21.00 Inf Leu 111.5 Phanerogamae -NA- Dicot GACAGTTTGGCCGAGTGGTctAAGGCGCCAGATTTAGGCTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACAGCTGTCA 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. AATCAAGGGTTGCCGGTCACGTGAGACACATTGTGGAACTCAGTCACTGAACTGGTTTTTACAAAAGAAAGGAAGTGTAATGAGGAAATACTTTCAACAT ttataaatttttagtcaaGGTTGGTATTCAGGCGAGCCCagtttgttttttgtttctttaaaattaaaagttgggCTTAAAAGGTAGGGTTGGTATTTGG - 45846_PtRNAdb chr-7.trna94-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 94 559737 559666 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 94.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TGACCACGGATGTAGTTTAcctatatattatataagaTAGGACTAGAATTACAGTAATTATCTTTACTTGGGTGGCATATTTGACACTTCCCATCAACAG atttattgttttttctaGCCAATCCACCATTCGCTTCCTTAATTGAACTCCCCTTCCTTAAACCTTTACGGGTGGCGCAGCCGCAGCCTCCACCTCTGAA - 45847_PtRNAdb chr-7.trna9-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-7 9 3029517 3029588 Gln TTG 0 0 74.2 54.70 19.50 Inf Gln 105.6 Phanerogamae -NA- Dicot GGTTCCATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTGGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ATtctgagtaaaaaaaaaatacacaaatgGTAAGACCATCCTTTGTTAGTACAATCAGCTCGAAATTACAACTTTATTAGTGAAACCATTGACAACTTGC TGctttgttttatctttttaatcatAATCAATTATGATTTACATCAGTAGTGGACCATTAGGCCCATGTAGTATTGCTTTTAAATTTGCCCACTTGTTAA + 45848_PtRNAdb chr-8.trna10-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 10 5726823 5726896 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ttatgaacttgtgtttttatattttattatatataagtacataaaatattataattttttaatagactGAGAAAAAAAACCCTGTTACAGTGAAGGAGTT CtttaatgttaattttcttttggtaatttTGCGATGCAAAATCGAAACGGCGTCGTTAAACTTCTCCTTCTCCTTTACGTCAGTCACCCGCTTATCACGG + 45849_PtRNAdb chr-8.trna11-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 11 5927408 5927485 Glu CTC 0 0 50.6 31.00 19.60 Inf Glu 60.7 trunc_start:1 Phanerogamae -NA- Dicot CCGTTGTAGTCTAGTTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTTCCGGCAATGttttgcttA 78 .>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<......... AAAGCATAACGCTATCTTTTGCAAACCCTGCTTACCACCCTctaaaaatgacaaataattaataaatagataaaaataaaaatagtctTACATCATCAAT ttttgttctttttccccATTTTgcttgcttttatttttgtttgtttgtttttttttctcattttgctTGCTTACTTTGTTACTGGTATGAGTTTTTGTTA + 45850_PtRNAdb chr-8.trna13-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 13 10309390 10309462 Glu CTC 0 0 78.9 53.10 25.80 Inf Glu 99.2 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGTTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AGAGTGTGAGAAACATGGGGAAACAAACTAAACCCTGCTTACCACCCTctgacaaataattaataaatacataaagACAAAAATAGTCCTACATCATCAA atattttgcttatttttgttcttttcccCATTTTgcttgcttttatttttgtttgtttgtttgtttttttcattttacttgCTTACTTTGTTACTGGTAT + 45851_PtRNAdb chr-8.trna14-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 14 11054999 11055070 Gln CTG 0 0 75.3 51.20 24.10 Inf Gln 106.0 Phanerogamae -NA- Dicot GGTCCCATGGTCTAGTGGTtAGGACATTGGACTCTGAATCCAGTAaCCCGAGTTCAAATCTCGGTGGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ACGTCTTTTGGCTTTGGGGGTAAGTTCCCTTTAGAAGAGTGCTAGGTTTTTGGATATTAAATagtattaacattttatttgtgGCTTCCTCAACAAAAGT taatattttgattttggtgagtggatggaaaagaaaaaggaattttgGGCTGGGAATAACAACAGCTGCCAAATGGTTGTGGTTGGTTGTATGATGATAG + 45852_PtRNAdb chr-8.trna15-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 15 11091206 11091286 Gln CTG 11091245 11091250 29.2 12.00 17.20 Inf Thr 31.3 IPD:-44.30 Phanerogamae -NA- Dicot AGATCTGTaAGCTCAaaATGGCAGAGCGCTCAATCCTGTATTGAGAGGtTGGTGGTTCAAATCCATCCAGATCCA 75 .>>>>>>...>>>>.........<<<<.>>>>>.............<<<<<.....>>>>>.......<<<<<<<<<<<.. catatatcacgattatttatcaaaatagatGTTTTTGTACGGTTGAGGTCGGCTCTTTGGTGTCGGTTTTTGAAGGTGTCTTTAACTTCACGAATTGGAA aaacttaattttgaattttgctTTTACTTTGGGTTACTAAAACATTCATCTCTTCAATATGGCAGTTGCAAGAGACGATGAGATGATGCAAAAGGATATG + 45853_PtRNAdb chr-8.trna16-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 16 14225787 14225860 Pro TGG 0 0 51.7 25.20 26.50 Inf Trp 52.7 IPD:-5.50 Phanerogamae -NA- Dicot AGGGATGTAGCGCAGCTtGGTACCGCGTTTGTTTTGGGTACAAAATGaCACGGGTTCAAACCCTGTCATCCCTA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGAGGAAATGgaaatatttgttttgtataTCAATAGATGAAATAAAGGTGTGGAAAACAAGATAAGGATTCTCTACAATGACATTGTAGGCTAATTGAA CCTATTACTTCTCCTTTGAGTAGTAACGAGGGAGTCGTTTTAGATTGATTAATGTTAAGCATACATAATCTATCATTTTctcatattatatatgatatat + 45854_PtRNAdb chr-8.trna17-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 17 14226044 14226117 Trp CCA 0 0 60.0 34.50 25.50 Inf Thr 57.7 IPD:-5.00 Phanerogamae -NA- Dicot ACACTCTTAGTTTAGTTcGGTAGAACGTGGGTCTCCAAAACCCAATGtTGTAGGTTCAAATCCTACAGAGCGTG 74 >>.>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. tattatatatgatatatgatagTATAGATGTGCGCGATGTATTGgggttataaaataaaagaatcctCTTTTTTACAATCTTATTTATTATGATAAGAAA ATTTCGCTCTTGTTAGGTCGAAAATTACACCgaactgaaaaaaaattaaacagcAATTCAAATTTGACCTCcttggattaaattattaaattagaattat + 45855_PtRNAdb chr-8.trna18-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 18 21361390 21361470 Leu CAA 0 0 44.5 35.30 9.20 Inf Gly 49.7 IPD:-24.30 Phanerogamae -NA- Dicot GCCTTGGTGGTGAAATGGTaGATACGCGAGACTCAAAATCTTGTGCTAAAGAGCGTGGAGGTTCGAGTCCTCTTCAAGGCA 81 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<. CCGATCAATAGAAATACTCCAACACTCTACCTTTGTCATATATTCCATACATCACACTAGATAGATATCATATTCATGGAATACGATTCACTTGCAAGAT TAATATTGAGAATGCTCATTGAATTGGAATAAGTTCGGCAGCGGATTACGAGATCTTGGTAATCTTCTCTATCTAATGAATGGGGAGTCCGCTTTGAAAT + 45856_PtRNAdb chr-8.trna1-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 1 564543 564615 Phe GAA 0 0 76.1 54.40 21.70 Inf Phe 115.3 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCACGTGTTCGATCCACGTTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. TATAACAGTTCTAGTCAAGGGAGAAGAGGATTGAATTTGGCATCTCATTGGAGCAACAGCAAATAGGCTTTATATCTGAAAAAATGTTGAGCATTCATCT TTTTTATTTGTTGGTGATTCATTGAGTCAATTGGGATTTGGGCAAGTTTAAATCTggagtttttttgaaaacaaatatttaattgattagTTATGatgga + 45857_PtRNAdb chr-8.trna20-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 20 36061352 36061435 Leu CAA 0 0 81.0 54.60 26.40 Inf Leu 125.6 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCCTCGTGAGAGGgCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.><.<<<...>>>>>.......<<<<<<<<<<<<. CCGCGAGGAATTGTTAGCTTCCACATTCAAATTAACATACATAGCTGTTAGCTAAAAGATAAGGAATAAATAGTGTAATATGAAAGATTTTACACAAGTA ttttgttttctaatttttccttCTAATCGGCCGGGGATTCATTGggttccttttctttccttctaaTGACGGGCCTTACCATTGGGTGttaagaaattga + 45858_PtRNAdb chr-8.trna21-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 21 38515985 38516057 Ala TGC 0 0 50.8 34.50 16.30 Inf Ala 77.7 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCACTCGCTTTGCATGCGAAAGGcACGAGCTTCAATCCCTCGCATCTCCA 73 >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>.........<<<<<<<<<<<. TGAATAAAACTCCAAGAAGATAACAAGACCTGTTATAAGGTAAATGGAAAAGACAATTGTGACAAAcattagaaatatataaattaaacctGACGACGAA caattgttttcttttttcatctCATGAGGGGTCATTTACGAAAATACCCTTCAGGTGCTCGGCTCAAAAGATTTGAGAAACTTGTTTAATGGCCCATCCT + 45859_PtRNAdb chr-8.trna22-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 22 40130939 40131010 Thr TGT 0 0 79.3 49.90 29.40 Inf Thr 86.8 Phanerogamae -NA- Dicot GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGcCTGTAGTTCGATCCTGCATGGGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTGCTCCTGGTGCCCCCGCTCGTATCAACATTTGCCTTTTTGCTTCCCTTTCAAGTCAACATACATTCTCTAAACAAAAAAAGGAAGGCATAACAACGAA AATCTTTTTTCAACTTTGATGTTCAAAGTTACACAGCTCAGGTAGCTAGAGCCTAGAGGTGAGAGATATGCCAACCATTTTTAACGTAATAGTATTGAAT + 45860_PtRNAdb chr-8.trna23-Asp-ATC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 23 40805404 40805477 Asp ATC 0 0 57.6 43.80 13.80 Inf Ile 59.9 IPD:-34.20 Phanerogamae -NA- Dicot GGGATTGTAGTTCAATTGGTcAGAGCACTGCCCTATCAAGGCGGAAGtTGCGGGTTCGAACCCCGTCAGTCTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTGagtataaattgtgaataaaaaatagaaaatcataaaagatgGAAAAAGCTTTCGGCTCTACTCATTCCATTATATTGgcactttcttttatttccct acggataaaattttaaaaatgcatCAATTGATCCCTCTATTTTTTGTCAGAGGGGATACAAATGAAAGAATTTCATTCCCAACGATatctttatcttctt + 45861_PtRNAdb chr-8.trna24-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 24 41251744 41251814 Gly GCC 0 0 55.7 36.90 18.80 Inf Gly 80.1 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGATACAGaCCCGGGTTCGATTCCCGGCTGGTGTA 71 >>>>>>>..>>.>.......<.<<.>>>.>.......<.<<<....>>>>>.......<<<<<<<<<<<<. CATGCTAACAAGTTCCATAAAGAAATAGAcaggaatttaaaataaattcttaattCGTTGATATGGTTATATACATCTAACAACTAGGGTCTAATGGCTT attcatttttgtatttattactttttgtgAGGCATCCGCATCTTTGCTTCCCAATGTGCCGAAGGCCCATTATTATCCATTGAATGAGACCCCTCCAGGC + 45862_PtRNAdb chr-8.trna25-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 25 42419411 42419484 Thr AGT 0 0 74.7 46.20 28.50 Inf Thr 89.4 Phanerogamae -NA- Dicot GCTTTCATAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAATGAAAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCCAGATTTTCACTTATCCTCTATTTCTGCTATTTCTCTTCCGTTTTTTActttatacttatttatatataaataaaaaatagctcTAAACCTCAACGTG AGGctgattaattattattttttgcaatagaaaataaaaggaaagaacCTCATTTCTGAATTCTATCCTATTGCATACTACTTCCATTCACATATGTTGT + 45863_PtRNAdb chr-8.trna26-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 26 44854255 44854326 Arg TCT 0 0 31.2 18.80 12.40 Inf Gln 39.8 IPD:-30.80,trunc_start:8 Phanerogamae -NA- Dicot GTGTCCATTTTTTAATGGAtAGGACAGAGGTTTTCTAAACCTTTGGTATAGGTTCGAATCCTATTTGGCGCA 72 >>>>>.>...>>>........<<<..>>>>>.......<<<<<....>>>>>.......<<<<<<.<<<<<. CAATACAATTTTTCACATGTTATTTAGTTTTTCCAACCAAGAGAAAAGAAACCGaacaagaggaaaaaaaaattaaaatgtcaaaaaatcaCAATGAAAA ATTTAAAATCGATTTCTCTATATTCtattaagttagaattttttatttataataacgTTCCATTTGATCCTCAACATCCTACATTCATGGAGATTGAATT + 45864_PtRNAdb chr-8.trna27-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 27 45216199 45216270 Asp GTC 0 0 67.8 44.80 23.00 Inf Asp 92.9 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGCGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTTGTTTGAATATCGGATCTTCCCTAAGCAATTACTCATTTAGACTTCGAATAGTTTAGAAACagataaaatattaagaagagccttagaaaataaatga aTTATAAATTTTTTCCTATCAAAAGAAGTTTTTGGATTTCTGGTCAAATTCCAGATATTGCATGCGTAAAATATTAGAAAACTACCGAAAAATAGCACGT + 45865_PtRNAdb chr-8.trna28-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 28 45216369 45216440 Asp GTC 0 0 52.3 41.60 10.70 Inf Asp 79.6 Phanerogamae -NA- Dicot GTCGTTCTAGTATAGTGGTgAGTATTCCCGCCTGTCGCGCGGGTGaCCCGGGTTCGATCCCTGGCAACGGCG 72 >>>>>>...>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<.<<<<<<. cgaTTATAAATTTTTTCCTATCAAAAGAAGTTTTTGGATTTCTGGTCAAATTCCAGATATTGCATGCGTAAAATATTAGAAAACTACCGAAAAATAGCAC ATTATTAATATTTTCCTATCAAAAAAAGATTTTGGATTTCTGGACAAACTCCAGATATTGCATGGGTAAAATGTTAGAAAACTACCGAAAAATAACAAGT + 45866_PtRNAdb chr-8.trna29-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 29 45216539 45216610 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CGATTATTAATATTTTCCTATCAAAAAAAGATTTTGGATTTCTGGACAAACTCCAGATATTGCATGGGTAAAATGTTAGAAAACTACCGAAAAATAACAA aattttaattattttcctatCATATAAAGTTTTTAGATTTCTGGACAAACTCCAGATATTGCGTGGATAAAATACTAGAAAACTACCGAAAATCAACAAG + 45867_PtRNAdb chr-8.trna2-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 2 1139393 1139466 Met CAT 0 0 35.5 20.00 15.50 Inf Thr 38.6 IPD:-38.60 Phanerogamae -NA- Dicot ACATCCATGGTTGAATGGTtAAAGCGCCCAACTCATAATTGGtGAATTCATAGATTCAATTCCTACTGGATGCA 74 .>>>>>>..>>>..........<<<.>>>>>.......<<<<.<......>>>.........<<<.<<<<<<.. ATGTCCTTTCATTGATTCCTCCTAAATTGTATTGATTTAtcctaaaaatttcatttcaattggAATTTGGTTACTCACCATGTACGAGGATCCCCGCTAA CACCAACAGGACTCTCTAATAAGTCTACTGGAATTGGCTATATATTAATAGAATCTCATCATCTATACATAATGAATTGATGTGGCATCCTaagaaaaat + 45868_PtRNAdb chr-8.trna30-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 30 45216710 45216781 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gaattttaattattttcctatCATATAAAGTTTTTAGATTTCTGGACAAACTCCAGATATTGCGTGGATAAAATACTAGAAAACTACCGAAAATCAACAA attattaattttttcctaTCAAAAACGGTTTTTGGTTTTCTGGACAAACTCCAGATACTGCATGGCTAAAATGTTAGAAAACTACCGAAAACTAACAAGT + 45869_PtRNAdb chr-8.trna31-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 31 45216880 45216950 Asp GTC 0 0 57.9 36.80 21.10 Inf Asp 81.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCGGCAACGGCG 71 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>......<<<<<<<<<<<<. cgattattaattttttcctaTCAAAAACGGTTTTTGGTTTTCTGGACAAACTCCAGATACTGCATGGCTAAAATGTTAGAAAACTACCGAAAACTAACAA ATTGTTAAGTTTTTCCTATCAAAAAaagtttttggatttttggaCAAACTCCAGATATTGCATGGCTAAAATGTTAGAAAACTACGGAAAATTAAGGAGT + 45870_PtRNAdb chr-8.trna33-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 33 45217214 45217286 Asp GTC 0 0 42.7 33.40 9.30 Inf Asp 60.7 Phanerogamae -NA- Dicot ACAaGTTGTAGTATAGTGGTaAGTATTCCCGTTTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGGAACGGCG 73 .>..>>>...>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<.<<<.<.. ggcgattgttaagtttttttcctatcaaaaaaagtttttggatttttggaCAAACTCCAGATATTGCATGggtaaaatattagaaaacaaCTGGAAATCA ATTATTAGTGGTTTTCCTATCAAATAAAGTTTTTGGATTTCTGGACAAACTCCAGATATTGCATCggtaaaatattagaaaacTACCGAAAATCAACAAG + 45871_PtRNAdb chr-8.trna34-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 34 47346904 47346976 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GCCTTAAATGACTAGATAACAATCAAACAGAACTAGTCCTCCTGCTTTTGGATGCAAAGAGTTTTATTCTAGTTAAATCTGATTGAAGCCCTGTAACAAA aatctttttaatttttttttttggatttcttGCTTCCATGACCCGATTCCCAAACCCTCTTTCCTTGCTCAGAAATGGGATTTCATTCCTTATtctatag + 45872_PtRNAdb chr-8.trna35-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 35 48911396 48911467 Thr TGT 0 0 84.5 58.50 26.00 Inf Thr 95.0 Phanerogamae -NA- Dicot GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGtCCGTAGTTCGATCCTGCGTGGGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCCACTTTCTGCCTTCTCGCTTCTTCTTTATTTGAATCCTTTTGCTTggttaaattaagtaaatttgtATTAATACAGCCTATTAGACTGGCAACAGCTA ttaattttaaaatcccTCGGGACTTGGGACTTGGGACTCGTAAACCCCTGGCCTTCATCCTTAAACCTTTGAGGGTTCTTCGAATCAAACCTTAAAGAAA + 45873_PtRNAdb chr-8.trna36-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 36 50567587 50567659 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. aattgattggaAGTCAAATCGGTTAGACCCTAGTTCCCAATTTAACCagttcaaataaatttataaataaataaatccaaaatCACTTTTGAATCAACAT TTTtatcctccttttttttttgacctTTTTCAAACGTTAAAACGTTCTGTTAGTCCCTGTACTTAgacaaactttaaaatttagtctctgtaACATtatt + 45874_PtRNAdb chr-8.trna37-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 37 51297401 51297487 Met CAT 51297439 51297451 64.2 40.70 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>......................<<<<.....>>>>>.......<<<<<<<<<<<<. ATTGTGAATTTGACTGTCGTATTATTCATTGAAGTCGAACAAACtgctttaataaaattacatactttaatacataatttagcAATCAATGAACAGCACT gaaattttttttaatttttgttatatacaGGGATGGCAACGGCCAACGGGCTCGCTTTCACTCATTTGATTTTCATGCCTTCCATTCCGATTTCCACCCG + 45875_PtRNAdb chr-8.trna38-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 38 51695572 51695643 Trp CCA 0 0 54.3 41.80 12.50 Inf Trp 79.8 Phanerogamae -NA- Dicot GGATCCATGGCGCAATGGTAGTGCGTCTGACTCCAGATCAGAAGGtTGTGTGATCGATTCACGTCGGGTTCA 72 >>>>>>...>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<<<. CGTCGACGCAAAACAAAGATCCTTTATGGCCTCAGGTAACTTGTTTTATTTGTCatataatttggtttttaaaaaataggaacAGCAATTTACCACCCAA TACCCCGGTCCTATTGggaattcctttttctttgagCTAACATGGCATTTACCTAAGTCCCAGACTCAGATTTGGGCAATGTCCCTGCACTAATCAAACA + 45876_PtRNAdb chr-8.trna39-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 39 52331219 52331289 Gly GCC 0 0 61.0 42.90 18.10 Inf Gly 87.5 Phanerogamae -NA- Dicot GTACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. atattttaagataaaatatgcGTTTTTTGAATTCTCATTGCAAATGaaactaaaatgttaaaattatagatatttgCATTCATCAGCATGTAGGCAAATA TAGGAGTGATCATTTTTGGCCTTCTTTTTCATTTGACAGCTGCGTTGATTGTGTTCTGGTCTGGCGCCGTGAACAAAGTTATGTACTTCCTCCCATCCTC + 45877_PtRNAdb chr-8.trna3-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 3 1359483 1359556 Ile AAT 0 0 84.0 56.60 27.40 Inf Ile 110.3 Phanerogamae -NA- Dicot GGCCCATTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTTGTGTGCAGAAGAAATGAACAAATTGCAAAATGCACAGCTTGGTTTCCCATTACTGTTTCTTCCTGTACAAATATAATTGTTTCAACGAAACGCCGGT tttgtttaatattttttaatattcggGCCTGATATTAAGGTCATTTGGGCTCGCATATTACCTAATTAGACCAAAACTAAACTTACCAAATTATTTGGGT + 45878_PtRNAdb chr-8.trna41-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 41 52776824 52776897 Ile AAT 0 0 81.8 58.30 23.50 Inf Ile 106.8 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CGGacatttataatatcaaaataaaaattaaaaaaaaataaaactgtttgttgttaaagtaaaaaaataatttgagatTATTTTCCAGGTTCATGTCAAT CTtgatatctttttattttttctttttatttcctttctagAAAGGGCGTCGTTTTCCATCCATTTGACCTCCTTCAATCATTTAACGGGGACAGTTTCGT + 45879_PtRNAdb chr-8.trna42-Ala-CGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 42 53790853 53790925 Ala CGC 0 0 68.3 44.10 24.20 Inf Ala 99.2 Phanerogamae -NA- Dicot GGGGGTGTAGCTCAtATGGTAGAGCGCTCGCTTCGCATGCGAGAGGcACGGGGTTCGATTCCCCGCACCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATTTTTTActtaactattttaaataatttaattgattaaataagattaaaaaaaaaggatcagAATTGGATTTCTTTTAAGATTATCCCAATGGCCGCTT ttaagcttttttttttttaatactgtAGCTTTTTAGATCAATAGatgaaaaacataataaaagttATGAAAAGCCAATGGGGGTGTAGCTCATATGGTAG + 45880_PtRNAdb chr-8.trna43-Ala-CGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 43 53791004 53791076 Ala CGC 0 0 68.3 44.10 24.20 Inf Ala 99.2 Phanerogamae -NA- Dicot GGGGGTGTAGCTCAtATGGTAGAGCGCTCGCTTCGCATGCGAGAGGcACGGGGTTCGATTCCCCGCACCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GGTTCGATTCCCCGCACCTCcattaagcttttttttttttaatactgtAGCTTTTTAGATCAATAGatgaaaaacataataaaagttATGAAAAGCCAAT GTTTTTAAACGCGAACACCAAACATGCACAGTGCAAACAAAACGATCCTTTTCCCATCCAATTTGTCCTCTGAACCTCTCGTTCCTCATCTTCTTTTTTT + 45881_PtRNAdb chr-8.trna44-Gln-CTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 44 53838989 53839060 Gln CTG 0 0 74.3 49.60 24.70 Inf Gln 103.3 Phanerogamae -NA- Dicot GGTTCCATGGTCTAGTGGTcAGGACATTGGACTCTGAATCCAGTAaCCCGAGTTCAAATCTCGGTGGAACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AAATTTTGAGCTATATGGAGAGATggttaaatttgtattaattcaacaattataatagctttttaataaaaaaacattttctgTAACGAATTTCACAGAT ttatttttattttttcattttgccATTTTGGACCATATATTTTGCTTACAATGCTGTAGCTCGTGGCTGACTGTTATCCATTTCCTTGtgaacacacaca + 45882_PtRNAdb chr-8.trna45-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 45 54527491 54527570 Leu TAG 0 0 69.5 48.50 21.00 Inf Leu 111.5 Phanerogamae -NA- Dicot GACAGTTTGGCCGAGTGGTctAAGGCGCCAGATTTAGGCTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACAGCTGTCA 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. AAAAGTATCACAAATTAAAATATCCttacaattatatcaataatccTTTACTGATTttcttattataaatatattttatatggcTTCATAGTCAAGCTGT cttttttaagtttttattttattgggcTTAAAATCCAAGTTCTTAACGGGCTTGAGGCTTTTCGGTGTAATGCAAAAGACCAGGAGTTAGAGTCCAACCT + 45883_PtRNAdb chr-8.trna46-Cys-GCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 46 55442103 55442174 Cys GCA 0 0 82.1 59.90 22.20 Inf Cys 106.6 Phanerogamae -NA- Dicot GGGTCCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCACCGGTTCGAACCCGGTTGGGCCCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGTTTGAGAGAGaccaaaaaacataaaaaatatatatcatgtGTCAAGTGTGCTTAACATTTCctttatataagttatttttaacTCGTATACCAACTT ACAGTgccaatttattttttcctcGTCAGTAGTGAAATAAGCGGTGtcgttttatatatattctgcAGGATTCTTATGGCTTACGGGCTACAAAGTAGGC + 45884_PtRNAdb chr-8.trna47-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 47 56162886 56162957 Asp GTC 0 0 36.6 29.60 7.00 Inf Asp 47.6 Phanerogamae -NA- Dicot GTCGTTGTAGTATAATGGTgGGTATTCCCGCCTGTCACGCTGGCGaCCCGGGTTCGATCCCCGGAAACGGTG 72 >>>>>>...>>>>........<<<<.>>.>>.......<<.<<....>>>>>.......<<<<<.<<<<<<. AAATTGCTAccctttttgaaaattcaagGTTCTTTAGATGGGAATCCATTAAAATGCCAATAAaatcttatataaatttatttaatcgtTAGATCAGCTG TTTTCTTCCGTTTTTACATTTTAGGTTTAATTCTGCTTTTATTCCCTCTATTATGCTGGAATTTAAGAATTGatctttctattttaattttgatatactT + 45885_PtRNAdb chr-8.trna48-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 48 53557059 53556988 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACACAATGGTGCATGAGGACCGAAGGGCAAAGGGGAATGAAGAAATGAGTGGCCTAGTGTTTAGTGactttataattaagttttcaaGTCTCTCTCGACT AAAGAAAGTAGCTTACCGGGCCATCAATTTTTTCAATCTTGCATCAGGCCTTTTTATTACAGGTAATGCATACAAGCGATgcaaatattaaatacataCA - 45886_PtRNAdb chr-8.trna49-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 49 53213816 53213745 Thr TGT 0 0 84.5 58.50 26.00 Inf Thr 95.0 Phanerogamae -NA- Dicot GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGtCCGTAGTTCGATCCTGCGTGGGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGGTCTACAAATTTCTGATATTTGGATGAATGATATTAATGCAGTTTATGGTTGGATTTGTAAGATATGAtgtttgtatgttttttttttaagcgAAGAA TGCTTAGTTTTCATATGTTTgcaattttttaagtaaattaaggAGATCTCTAAGTGACATTAAACTTGAGAATAATCTATGATAAATTAGGGTTCgtgtc - 45887_PtRNAdb chr-8.trna4-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 4 2313646 2313717 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CAAGAAAATATGGCAGCTCTTGGAACTTGGAAGATCAGGAATTTAGCCCGTTGGAAGATCATTCggattatacaaaataaaaaataaggccGACGGAGAT CTTtctagtttttgtttttgtaccTCAAATTTTTAGATGTCAGACAACTTTCAGATCCATTTGTTTTGGAAATTCAGGTGTAAATGTCATTTACGATTGT + 45888_PtRNAdb chr-8.trna50-Val-CAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 50 53114139 53114066 Val CAC 0 0 82.4 54.40 28.00 Inf Val 103.7 Phanerogamae -NA- Dicot GTCTGGGTGGTGTAGTTGGTtATCACGCTAGTCTCACACACTAGAGGtCCCCGGTTCGAACCCGGGCTCAGACA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TACAAAAATATCAGAAAGGCAAGGAAACGCCAATATGGGAAGATCAAATCCAGTTGAAAAGTTCAACATCTGAGTTAATGTCGATCAAGTCATCAAATAA ttttttttaaatttttttcttttatttcagtTGAATATGGTCCCACTCGAAAAATACACCAATCAAAATGGTAAGAACCTTTGCCAATGGGATTTTCGCA - 45889_PtRNAdb chr-8.trna51-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 51 52840814 52840742 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CATTTGGGCTTCTTCATACACCTGAACATATAGATGGCTGCTTCAGCTGTTTCTTAACATAGACGACATATGTCTATAACAATAAAATGGGGTCAACGAA ttagttcttttttttttaaatcccgTACTAGGTAGTGGCTACCTGCCTTGTTCGTAGCGACGTCGTTTTGAACACATCAGAAACTAAATTTGTTGTCTTT - 45890_PtRNAdb chr-8.trna52-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 52 52781024 52780951 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAAGTTTCCATTATACTTTTACCAAGAGAAAGCAGATATAATACAACCCAACACAATATGAAAATGgtgatttaaagaaaaattatagtCAATGTCGAAT TTTACAGTTTTTAGTACTTTTgtttttgactgatttttgaCCGTTGGTATAATATCTAAACAAATAAGCAAAGCAATAGGCAGCTGACACAAGTATCACA - 45891_PtRNAdb chr-8.trna53-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 53 52627294 52627221 Met CAT 0 0 42.3 30.50 11.80 Inf Thr 49.2 IPD:-34.80 Phanerogamae -NA- Dicot GCATCCGTGCCTGAATGGTtAAAGCACCCAACTCATAATTGAcGAATTCGTAGGTTCAATTCCTACTGGATGCA 74 >>>>>>>...>>..........<<..>.>>>.......<<<..<.....>>>>>.......<<<<<<<<<<<<. GATGTCCTTTCATTGATTCCTCCTAAATTGCATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTAGTTATTCACCATGTACGAGGATCCCCCTAA CGCCAATGGGACCCTCCAATAAGTCTATTGGAATTGGCTTTGTATCAATGAAATCTCATCATCTATACATAACGAATTAGTGTGGTATATTCATATCATA - 45892_PtRNAdb chr-8.trna54-Gln-TTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 54 51010894 51010823 Gln TTG 0 0 73.5 53.70 19.80 Inf Gln 104.8 Phanerogamae -NA- Dicot GGTTCTATGGTGTAGTGGTtAGCACTCTGGACTTTGAATCCAGCGaCCTGGGTTCGACTCCCGGTAGGACCT 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TTTCCAACTTTACTATTCCGTATCCAAGTGATTTTCGGCGGTCTAGGAGTACGTGATACTTACGTTGGAGAAGTCTTAAGTATAAAAGCCTTAATAAACA TTTTTACTTGGAATTTTTTGAAACCAAAAAGTGGCAGTTAATAATACAATTTTCTACCTTCCAACAATCCCATGCTAACGGTATATTTTCAGATTTTGCT - 45893_PtRNAdb chr-8.trna55-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 55 49864752 49864679 Trp CCA 0 0 43.5 36.40 7.10 Inf Thr 43.9 IPD:-16.00 Phanerogamae -NA- Dicot GCGCTCTTAGTTCAGTTaGATAGAACGTGGGTCTCCAAAACTCAATGtCGTGGGTTCAAATCCTATAAAGTGTG 74 >>>>>.>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. aaaaaaaaatcgactttacttttttttgttttcgaagtaactatgttataaaataaaagaatactcttttttatatagtattatttattatgataaGAAA ATTCCGCTTTTGTTAGGTCCAAAATTACACCGAActgggaaaaaaaattgaacaacaATATAAATTAGATATGGATCAATTTTATTTAGTTCATTTATAT - 45894_PtRNAdb chr-8.trna56-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 56 48518500 48518429 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. tgatagcAATACGTACAGAAGTGGTCAACAATCTATGAGAAGGAAAGTGCAACAAACAACAGATCGTAGAAAATGTAAAACAACCGACATAATGTACAAG tTATAGTCTTTTTACCGAAATCCTTATGGGCGTGGCCCCATTCCAGTAGAGATTTTGTCGgtgaaattgaattttggagGTCTTTTTTATGTAATCATTA - 45895_PtRNAdb chr-8.trna57-Leu-AAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 57 47610487 47610407 Leu AAG 0 0 74.0 52.20 21.80 Inf Leu 110.4 Phanerogamae -NA- Dicot GTTGAGATGGCCGAGTTGGTctAAGGCGCCAGATTAAGGTTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACTCTCAACA 81 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. TATATCATTAAAGTTAATAGATGTAAATatttacattcattttttttgtaaatatttttaaattgtttactatattataattataaacattgACAAAGAA ACGTTATACTGTTTTTATGTGATTATGAATTAATCGTACTTACAAACTTCGATTCTATTTTGTTGTTGAATTTCGTTAAAgctttgatttttcatttgaa - 45896_PtRNAdb chr-8.trna58-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 58 43326678 43326606 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGGGTTCATATCTCAATTATAGAATCCTATATATTGTTGCGGGAATGTAATTAGTCAAagtaaaatgtatttaaatttatttttgtaagttCTCAAATT tattcttttcctttgttaAATTTTACGAAATCTGCCATTTCGATTTTCGACAtgggtttgttttgtttttggttctaatttaagtttgtttgttttttaa - 45897_PtRNAdb chr-8.trna59-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 59 39663589 39663518 Val AAC 0 0 47.3 13.20 34.10 Inf Cys 51.1 IPD:-35.00 Phanerogamae -NA- Dicot AGGGATATAACTCAACGGTAGAGTGTTACCTTAACGTGGTGGAAGtCATCAGTTCGAGCCTGATTATCCCTA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAAAGCCTGGCTCCAAGTTGTTTAAGAATAGTGGTGTTGTTGAGTTTCTCGATCCTTTGACTTAGGATTAGTCAGTTCTATTTCTTGAAAGGGGCAAGGA AACCTAATGtgagtttttctattttgcCTTGTCCCCCGCCGTGATCGAATAAGAATGAATAAGAGGCTCGTGAGATTGAGTGAGGGGGTAGGAATGACTA - 45898_PtRNAdb chr-8.trna5-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 5 2314808 2314879 Pro TGG 0 0 68.5 35.70 32.80 Inf Pro 111.2 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGGTCAAGGCTAGAATGTTTAGTCTATTGAAAATTAACATGACTTCTAGGTGGCAAAAGAGCTAATAGTTATAAATTAAAGAGGTTAGAGATCAAAACTT agttttcatttttttcttcccaATCTCTGAAAATAAGGAAATGAAACAGTTAATAAACAACCAGTTTAGCAACCAAAAAAGACAATATCAGGGATGTGCC + 45899_PtRNAdb chr-8.trna60-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 60 36830306 36830233 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGTGATGATTTATCTGGTTCTATACACTTTGGTTTAATACCTTTTAAAAAAtgctttgttttttaaatatatataagaatctTACATTGCGCCATGAGGT TTTTcttatcctttattttattgtttattatttttccatttttgaattaaaaaataaaaaaatccgaCAGGAAAGGTAATGAGGAGCATGGTGGATCCGA - 45900_PtRNAdb chr-8.trna61-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 61 36752218 36752146 Ile TAT 0 0 28.5 20.60 7.90 Inf Thr 22.3 IPD:-12.80 Phanerogamae -NA- Dicot GCATCCATAGTTGAATGGTtAAATCGTCCAATTTATAATTGAcGAAtTATAAGTTCAATTCCTACTGGATGCA 73 >>>>>>>..>.>..........<.<.>.>>>.......<<<..<.....>>.>.......<.<<.<<<<<<<. ATATCCTTTCATTGATTCCTCCTAAATTGCATTGATTTAtcctaaatttttcattttaattggAATTTGGTTATTCATCATATACAAGGATCCTCATTAA CGCTAATAGGACCCTCTAGTAAGTCTACTGGAATTGGTTCTGTATAAATGAAATCTCATCATCTGCTCTTTCATACTCTAAATTTCTACAAAATGTCCCA - 45901_PtRNAdb chr-8.trna62-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 62 36740331 36740261 Gly CCC 0 0 62.2 28.60 33.60 Inf Gly 83.8 Phanerogamae -NA- Dicot GCGCATCTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGaCCGGGGTTCGATTCCCTGGATGCGCA 71 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ataatatttttttcacattttgaaTGACTGATTCATTTTAgttaaatctaattatattttcatttattttaatatgtattttataatctttgtcAACGGA TTTTTacgtttattttaaaaagtggaattttattattatactaatttatgatttataaaaattaaagggaccATATTGATCAGTTTTCATTTTGGTGGTG - 45902_PtRNAdb chr-8.trna63-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 63 35881154 35881081 Arg ACG 0 0 47.0 37.60 9.40 Inf Ile 64.8 IPD:-24.20 Phanerogamae -NA- Dicot GGGCCTGTAGCTCAGAGGAttAGATCACGTGGCTACGAACCACGGTGtCGGGGGTTCGAATCCCTCCTCGCCCA 74 >>>>..>..>.>>.........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<..<<<<. GAAAGGCACTTTCACATCTTCTTAACCCGAAATGGCTGGGGAGAGGAAAGGTTCCTTTTTTTAGGGTACTCCTGGGAACAGATCCAGTGGAGACGAGGTG CAACCGGCCCAAAATGGAAGGACCTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATATGGAAAGTGAGTTTTCAAAACTCAGTATGTAACAAATAac - 45903_PtRNAdb chr-8.trna64-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 64 35404428 35404345 Leu CAA 0 0 77.7 54.90 22.80 Inf Leu 123.7 Phanerogamae -NA- Dicot GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCGTGGGTTCAAATCCCACTTCTGACA 84 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. CCTAGTTTATTTGCGAGGAATTGCTAGCTTCCGCGTTCAAATTAGCTGTTAGagaaaatattagaataaataatataatatgaaaCGTTATAAGCAGATA ATTTCgttttctaatttttccttCTAACGGGCCGGTCTTCTCAACTTTCCTTCTAATAACGGGCCTTACCATTGGGTGTtaagaaattgagtaaattaca - 45904_PtRNAdb chr-8.trna65-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 65 32042915 32042842 Met CAT 0 0 51.2 30.50 20.70 Inf Thr 51.9 IPD:-36.00 Phanerogamae -NA- Dicot GCATCCATGGTTGAATGGTtAAAATGCCCAACTCATAATTAGcGAATTCGTAGGTTCAATTCCTACTGGATGCA 74 >>>>>>>..>>>..........<<<.>>.>>.......<<.<.<.....>>>>>.......<<<<<<<<<<<<. ATATCCTTTCATTCATTCCTCCTAAATTGCATTGATTTATCCCAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTTTGAGGATCCCCGCTAA CGCCAATAGGACCCTCCAATAAGTGTATTGGAATTGGCTATGTATGAATGGAATCTCATCATCTATACATGATAAATTGGTGTGGTATATTCATATCATA - 45905_PtRNAdb chr-8.trna66-Ser-GGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 66 26955720 26955634 Ser GGA 0 0 53.1 23.30 29.80 Inf Ser 71.0 Phanerogamae -NA- Dicot GGAGAGATGGCCGAGTGGTtcAAGGCGTAGCATTGGAACTGCTATGTAGGCTTttgTTTAcTGAGGGTTCAAATTCCTCTCTTTCCG 87 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>.......<<....>>>>>.......<<<<<<<<<<<<. AAGGGGCGTAAACATTTTCATCGTTCATGCCTTTACTGCAAGAATATGAATGACTCGCTATTCACTCGCGGTTTTTGGGTCATAATCATAAGATTATTTA TACCCCTATCTTAACCTAATTCACCAATGTTACCGACctcaatgtaaaaaaaaacaatggaaaggtaaattttcaatttccgATCTTTCTATTTGACCCA - 45906_PtRNAdb chr-8.trna68-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 68 20219134 20219061 Asn GTT 0 0 84.6 58.80 25.80 Inf Asn 96.0 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTATGGCTGTTAACCATAAGGtCGGAGGTTCGAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATCAACGTCACCCATGTTTTCATCAGATTAGATTCCAGCTTTTCacacaattcaaaaattatttacaggcatgtaaataaattttaatataaaacctTAA aaattaattttttcaattgttAAACCAAATGAACTCCGTAAAACTCTACCCTACAAGCCCAACGCCAATCAATCCAACAGAGATTTCTAAGTTGTAGCCC - 45907_PtRNAdb chr-8.trna69-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 69 20155424 20155351 Asn GTT 0 0 84.6 58.80 25.80 Inf Asn 96.0 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTATGGCTGTTAACCATAAGGtCGGAGGTTCGAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAACGGTAACTTTGCATCAACGTCACCCATGTTTTCATCAGATTGGATTCCAGCTTTTCacacaattcaaaaattattaaattttagccTAAGAACGTAA aaatttttttaattttttgttaaaaccaaTGAGCTCCTCCGTATAACTCTACTCTACAAGCCCAACGCCAATCAGTCCAACAGAGATTTCTAAATTGTAG - 45908_PtRNAdb chr-8.trna6-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 6 2315642 2315713 Pro TGG 0 0 61.8 31.00 30.80 Inf Pro 103.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCTCGAGTTCGATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AGAGATTAGGACACGTTGGTCTTCCAGGAATGAGTTCATGGAAAATTAACCAAAGCCCTTTagaaagataataataaataaatatgaaatcaaaaacatt aatttttttactttttgaagATACTTAAAATATACCAGTTATCTAATAAGTCATcctaaataaaaggaaaataaataaataaaactgtATGAACTATCTT + 45909_PtRNAdb chr-8.trna70-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 70 16964194 16964121 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. cataaaatcaaaattagttGAACCCATAACCCCATAACCTTCTATATTGTATACagaaacagaaaattttaaatattattttttactatctAACAAATAA aatcttttaatttaaagacGTTTTAGACGATCACGACGGGGGCCAGCTTTGATCAAACCCATATCCCACGTTTACTCCTTATTGGGCTCATGCCGACAGA - 45910_PtRNAdb chr-8.trna71-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 71 16939973 16939900 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CCCAGCTTCAAATCTTTCGGTATAAGTTATACATAACAACAAATGTCCAATCgtttagtttttataataaaaatatttacgtaaattaaataataacagt taaaattttctttttagacaAGGGGCTTCAATATCCAAATTTACTCCTTATTGGGCTCATCCAGATCGATCTActctctttttctatttaggGATAGTGG - 45911_PtRNAdb chr-8.trna72-Val-AAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 72 16928252 16928179 Val AAC 0 0 72.9 48.60 24.30 Inf Val 93.8 Phanerogamae -NA- Dicot GGTGTCGTGGTGTAGTTGGTtATCACGTCAGTCTAACACACTGAAGGtCTCCGGTTCGAGTCCGGGCGACGCCA 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CCCAGCTTCAAATCTTTCGGTATAAGTTATACATAACAACAAATGTCCAATCgtttagtttttataataaaaatatttacgtaaattaaataataacagt taaaattttctttttagacaAGGGGCTTCAATATCCAAATTTACTCCTTATTGGGCTCATCCAGATCGATCTActctctttttctatttaggGATAGTGG - 45912_PtRNAdb chr-8.trna74-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 74 5580923 5580852 Phe GAA 0 0 30.0 19.40 10.60 Inf Cys 32.9 IPD:-32.90 Phanerogamae -NA- Dicot GGCGACATGGTCGAGCGGTAAGGTGGGGGATTGAAAATCTCTTAtTCtCCAATTCAAATCCGGGTGTCGCTT 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>.>>...........<<<<<<<<<<. tttttaacattttattaattttgaaaaatgaaatgagcTTTTTGaacgaaaatgaaaaatagaaggGTGATactctcattttttttgtttgtagcCTTTT GgtcgaaaaaaaaaaactcaaaacccTAACGCCTCCTAGCGTTTAGGATTCAAGAAAAAACTAAAGTAGTGGAAGGAAATCAGTAAATCTTGATATGGGA - 45913_PtRNAdb chr-8.trna75-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 75 4141578 4141507 Asn GTT 0 0 49.7 37.90 11.80 Inf Asn 42.4 Phanerogamae -NA- Dicot TCTTCAATAGCTCAACGGTAGAGCGGTCGACTGTTAATTGACTGCtCCTAGGTTCAAATCCTACCTGAGGAG 72 >>>>>>...>>>>.......<<<<.>>>>>.......<<<<<......>>>>.......<<<<..<<<<<<. ATGAGAATTGAACTCTATGAGATCTAATCTCTCGTTGTTCTTCAATAGCTCAAAGGTGGAGAACGAGAATTGAACTCTATGAGATCTAATCTCCCGTTGT atttgattcattttgaattaAAGAATTTAGAATGTCAAAATGAAAGGGTTCGCTTTGACCGCTAAGAGCAAGTAACTCGCTCCCTGTGTCTTTGTTTCTA - 45914_PtRNAdb chr-8.trna76-Pro-CGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 76 3810024 3809953 Pro CGG 0 0 68.5 36.10 32.40 Inf Pro 108.5 Phanerogamae -NA- Dicot GGGTGTTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGtCGCGAGTTCGATTCTCGCAACACCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CACTGTGTGATTTTGGTACAACGATATTTAATCAAGTGGATGATGATAACATTCATCcacaaataactaaaatatacgTTATGAAGACAGAAGAAGTAAA CTCCTTGTGGAATTTTGACTGATAATACTATTCCCCATGTCATCGAGTAGTATAGATTCTAGATGGGGAGGGGGGGGGAGGTTATCCATCTCGTCACGCC - 45915_PtRNAdb chr-8.trna77-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 77 3676555 3676483 Phe GAA 0 0 49.6 40.90 8.70 Inf Thr 49.1 IPD:-2.00 Phanerogamae -NA- Dicot GTCGAGATAGCTCAGTTGGTAGAGCAGAGGACTGAAATTTCTCGTGtCACCAGTTCAAATCTAGTTCCTGGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<.<<<<. TTCTTGTTCGagacttttaatttaatactttttcgttttcatttttaattgacaTAGACCCCAAGTCATCTAGTATTATGAGGATAATGCGTTGGTAATG TATGATTAATTTGAgggattgaattgattattttaattaacggCAGAGACTTAATTGGGTGCGAATTTAATACaagagtttaattatttttttttacatt - 45916_PtRNAdb chr-8.trna78-Arg-TCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 78 3216902 3216829 Arg TCG 0 0 81.9 60.40 21.50 Inf Arg 92.9 Phanerogamae -NA- Dicot GACCGCATAGCGCAGTGGAttAGCGCGTCTGACTTCGGATCAGAAGGtCGTGGGTTCGACTCCCACTGTGGTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ctagTGAGATTATATAAACATTATCTTACTTGGGGAAAGAGTAgtaatctgatcaaaatttaaaagttaaataaattagtttaacaGGTACAGCATCTAC attttttcctatttttcaaCAATTCACCCAGTATGTAtggtttctttttctcctttccttttgcTTTAATCTTTGTCTCTCTTGTTTTTTCATTTGTCTC - 45917_PtRNAdb chr-8.trna7-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 7 3325337 3325421 Met CAT 3325375 3325385 64.3 40.80 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>....................<<<<.....>>>>>.......<<<<<<<<<<<<. actAAGTCCTTTCTTCTGCAATGATGGGCTTTACCAGGGCAATGACTTCATTCATTGTTTAgtctatttaattttcaatatatattgaAAGAGCAACAAC atcattttccatttttcaaaatctagGATTGGACATATGATATGTCTCGCTCGCTCGTAGGTTCTGCCTACAGCATCACCAAGCAGTAGGAATCTCTTAA + 45918_PtRNAdb chr-8.trna80-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 80 1705509 1705424 Met CAT 1705471 1705460 64.2 40.80 23.40 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>.....................<<<<.....>>>>>.......<<<<<<<<<<<<. CAATATAGATGTATCCATTTACTGCAACGTGAATTTGGTTTTTTCCTTTACTCCTgcgtttttaaaaatattaatcatatatacCCCTTTGCAAATGGAA ttcttttcttttcctttttatattttcaaggCATTAAAGCATGTTTAtcacattaaataataattttaattttactaaaatattcaattaaagaaattta - 45919_PtRNAdb chr-8.trna81-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 81 1701535 1701450 Met CAT 1701497 1701486 64.2 40.80 23.40 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>.....................<<<<.....>>>>>.......<<<<<<<<<<<<. ATGTTCATAGGATTTTCAAAATTCTCGAAATATTTTTCCTGTGAAACTTACAGTTTCTAGcggatttattatatataacaatACATCCTTCGACACGTTA Agcataattttttcatttacaataaacattgaattgaaattctaacatattttgtttatttacagtcattccttcttttttcgtttttgttaagataaga - 45920_PtRNAdb chr-8.trna8-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 8 4265722 4265796 Thr AGT 0 0 63.4 42.90 20.50 Inf Thr 78.3 Phanerogamae -NA- Dicot GCTCTCGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGAcTTCTCAACAAGAGCA 75 >>>>>.>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>........<<<<<<.<<<<<. aaacaGTAGTACGGAGTATCAAATGCCATATCCAAAGTATAAGTGAAACAGTACTACGTCAAATcgttttataattaaagcttgAAGCCGTAATCAGCAA ATTTGtgctttattttctatttttgagtTCTGACATGTAATCTACTTAAGTTAATAGAATCTTTAAAATACTTTCGATTGGGCTCTCACCAAGGCTCTTG + 45921_PtRNAdb chr-8.trna9-Thr-AGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-8 9 4265890 4265963 Thr AGT 0 0 73.7 48.30 25.40 Inf Thr 89.1 Phanerogamae -NA- Dicot GCTCTTGTAGCTCAGTTGGTtAGAGCACCCGTTTAGTAAGCGGGAGGtCTTGAGTTCGACTCTCAACGAGAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGAGCAATTTGtgctttattttctatttttgagtTCTGACATGTAATCTACTTAAGTTAATAGAATCTTTAAAATACTTTCGATTGGGCTCTCACCAAG GAGTAGCAATATTCTACTTGTCCTGTCAATGCCTTTCATTTTTGACtgaagtttatttgattttttcctttttttgtttcttttcagAAAAAGATAATTT + 45922_PtRNAdb chr-9.trna100-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 100 27384132 27384059 Ile AAT 0 0 75.8 56.20 19.60 Inf Ile 101.0 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTTGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGGGCCatttaatggcttttttttctttattttttgttttttggaaaACGGCAACCTGTTACAGTAtttatttcaacaaaatttaagCAGCAGTATCGAC TTAATGGctttttttgtctttattttttgttttttggaaaACGTCAACCTGTTACagtatttatttaaacaaaatttaaacagcAGTATCGACGGCCTAT - 45923_PtRNAdb chr-9.trna101-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 101 27383965 27383892 Ile AAT 0 0 79.3 55.80 23.50 Inf Ile 104.3 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGGGCCATTAATGGctttttttgtctttattttttgttttttggaaaACGTCAACCTGTTACagtatttatttaaacaaaatttaaacagcAGTATCGAC TTAATGgcttttttttgctttattttttgttttttggaaaACGTCAACCTGTTAcagtatttattaaaatagaattttagcGGGAATATCAGCGGCCTAT - 45924_PtRNAdb chr-9.trna102-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 102 27383798 27383725 Ile AAT 0 0 79.3 55.80 23.50 Inf Ile 104.3 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGGGCCATTAATGgcttttttttgctttattttttgttttttggaaaACGTCAACCTGTTAcagtatttattaaaatagaattttagcGGGAATATCAGC TTAGTggctttttcctttattttttgttttttggaacACCGCAACATGTTAGTATTTAGCAGAACAGAATTTAGGTTAGAATATCAACGGCCTATTAGCT - 45925_PtRNAdb chr-9.trna103-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 103 27383636 27383563 Ile AAT 0 0 79.3 55.80 23.50 Inf Ile 104.3 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTGCATGGGCCATTAGTggctttttcctttattttttgttttttggaacACCGCAACATGTTAGTATTTAGCAGAACAGAATTTAGGTTAGAATATCAAC TTAGTggctttttcctttattttttgttttttggaacACCGCAACATGTTAGTATTTAGTAGAACAGAATTTAGGTTAGAATATCAACGGCCTATTAGCT - 45926_PtRNAdb chr-9.trna104-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 104 27383474 27383401 Ile AAT 0 0 79.3 55.80 23.50 Inf Ile 104.3 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTGCATGGGCCATTAGTggctttttcctttattttttgttttttggaacACCGCAACATGTTAGTATTTAGTAGAACAGAATTTAGGTTAGAATATCAAC AATCGTAACGTTGTCGTTTGCCCTATTTAAAGATTCCAGGCTCCTGCAAGTCCTGTCTAATTTTAACATtccatttttgttatttccaGTTTTAATATTT - 45927_PtRNAdb chr-9.trna105-Ala-AGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 105 22831483 22831411 Ala AGC 0 0 63.4 38.20 25.20 Inf Ala 98.3 Phanerogamae -NA- Dicot GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtACGGGGATCGATACCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AccattgatttaataaatatattatatccTTCCAGGGGCAGATTAggaattcaaaacaaattaggttgattaaaattataatggGAACAGTAAATATCAA ttgttatttttttccctatttGAAAAGGAAACAAACCTTTTCGGCTTTTCCCGCCTTCCACTTGCTTAAAAAGGTAAAACGGCGATTCTCTTTTCCTCGC - 45928_PtRNAdb chr-9.trna106-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 106 22125153 22125081 Met CAT 0 0 52.9 24.40 28.50 Inf Thr 63.7 IPD:-31.20 Phanerogamae -NA- Dicot ACCTACTTAACTCAGCGGTtAGAGTATTGCTTTCATACGGCAGGAGtCATTGGTTCAAATCCAATAGTAGGTA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CGGTTTGATTGGTATTTCTTAGAAGTAATATTGGATTTATAATCCATTGATGTAATAGgtcccttttctttctctctatgATTCCTTATGATAATAAATG GAACTTATTAGATACTATCGATCCCGGTGTCTAATAAGTTTTTCTACCcacctttttttattgattttctatctttttcatCCTATTctatttatgtttt - 45929_PtRNAdb chr-9.trna107-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 107 19803104 19803020 Met CAT 19803066 19803056 64.3 40.80 23.50 Inf Met 104.0 Phanerogamae -NA- Dicot GGGGTGGTGGCGCAGTTGGCtAGCGCGTAGGTCTCATAATCCTGAGGtCGAGAGTTCGAGCCTCTCTCACCCCA 74 >>>>>>>..>>>>.........<<<<.>>>>....................<<<<.....>>>>>.......<<<<<<<<<<<<. TATGCTCTTTTCATGTTTGCGACGTTAGTGCCTCTCTGGTGTTCAAACCAACgtgtaattcattttatattaaGTATACATCTAGTTCAAAAGTCAACGT ttttttcccttttctcttttcccttttcccttttctcttttctcttttctctttgaTGCTTTGGATTATACCTATATGATCTATTTGCAACTGATTAAGT - 45930_PtRNAdb chr-9.trna108-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 108 18872533 18872461 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GCATAAGGACTCATCtccaataaaagaaaatgctAGAGTGGAGGCATGAAAGATTATAATCTAAGATAAAGACATTATGGTTAACACTAGGAAGCGACAA TTAAATGTCATTTTTGCGGAGGGCAGGCCACATCACTTTCACATCCTCGCGGTTCTTATTCTTGGGTTTTTCTTTGTCCTCATTTATTCAAGCCCATTGG - 45931_PtRNAdb chr-9.trna109-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 109 16869669 16869597 Arg CCT 0 0 71.7 55.90 15.80 Inf Arg 84.3 Phanerogamae -NA- Dicot GCGCTTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAGGtCGTAGGTTCGACCCCTACCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. attaattaaatttaatattatttttatagaaaaatatccAAGAGACTAATGGTTCGTCTaactttcattttaaaattattagtttatatatattaacaag ATTCAATATTTTTGCAAGGAGTTTTTTACTTTTGGCATCCTCCAACAAAATGAGCCCTGGCAGCCGAAATAATTTaacaactaattttaaattgcaCAGT - 45932_PtRNAdb chr-9.trna10-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 10 6869234 6869305 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GATGATGGCCGCAGGATAGATAACAGTGGATGACAGAATCTTAACAGAATGAAGTAActtttttattgtaaatatattattaaatgttcTACTTCATAGG ACTctgaaattttaactttcacCGATTTTAAATTTTCTGTAACGACattattcttgaattttttaaagttagaatttaaataggtggaaaactttgtttt + 45933_PtRNAdb chr-9.trna110-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 110 16370478 16370406 Arg CCT 0 0 66.9 46.30 20.60 Inf Thr 78.0 IPD:-0.80 Phanerogamae -NA- Dicot GCGCCTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAAGtCATAGGTTCGACCCCTATCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. TCAACTACTTGCAGAAAGTTCAGTTAATTGATGACGAAAGTTGAAAAGTTGAAAAGACAAGTAATTAGAAGTAGACTAAAATAACATGCCTAAGCAGCGA TTTGTTTtgctcttaatttttatattctttttagaGCTGTCTATGTCTTCCATTCCTCAACCAATGCAAGCATTCATACATGAGGGAAAGAAGAAACAGA - 45934_PtRNAdb chr-9.trna111-Asn-ATT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 111 15714028 15713950 Asn ATT 15713988 15713986 30.9 16.00 14.90 Inf Cys 24.2 IPD:-24.80 Phanerogamae -NA- Dicot GGATCCATaAGCTCAaaATCGGCAGAGCGCTCAAACATTGTTTGGGAGGcTGGTGGTTCGAATCCACCTGGATCCT 76 >>>>>>>...>>>>..........<<<<.>>>>>..........<<<<<.....>>>>>.......<<<<<<<<<<<<. AAAGGCTCAATTTTTGGGGCCTTATATTTAACTAACTTACATGCCTTATGGGCTATTAGGTGTTGTAGGAATTCGGCCGTACATCCGTCCTCCTTAATAT TAATTTCTTATGGTTTTAATTCCAACTTTTGATGAGAAATATACATGCAAAAATAATCGATTGatctaaaaataacaaaataaagacGAAATCAGGTTTA - 45935_PtRNAdb chr-9.trna112-Ala-CGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 112 15575017 15574945 Ala CGC 0 0 31.2 18.30 12.90 Inf Ala 73.3 Phanerogamae -NA- Dicot GGGGGTGTAGCTCAGATGGTGAtGCGCTCGCTTCGCATGTGAGAGGtACGGGGATCGATGCCCTGCATCTCCA 73 >>>>>>>..>>>>.......<<.<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTTTGAAATTCGTatgatataaatatgtttattttgaaaagttaatataacctcaattaaaatatttgatgatataaatcAAACAGTACAGATTTCTAAT ATTTTCAccctttttctgtttttgttttcgaattccaattttcttttattggaaagaaaaaaatcccCCCGCCTTTCCATCTTTCTTAAAAACACGGCAA - 45936_PtRNAdb chr-9.trna113-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 113 14411000 14410928 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. taagaTATCATTCattctttcctcttttctttttactaaaaataagagATTATTcaagattttatatttattattataaattattagcTTAAAAAACAAT TAAATGTTTTTCCAAATGATTTTTTCAGTCCTTTGTAGAACAAAGTCGTAATTTTCAGGCCCAAAAATTGTCATATGACTATCAGATTTCTGCGATGGCC - 45937_PtRNAdb chr-9.trna114-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 114 13729005 13728933 Arg TCT 0 0 70.2 50.00 20.20 Inf Arg 95.6 Phanerogamae -NA- Dicot GCACCTGTGGCCTAATGGAtAAGGCGTCTGACTTCTAATCAGACGAtTGTGGGTTCGAGTCCCACCAGGTGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TATATATAACCACATagtattttaattgaaaagctaatgatattaactatttggactaaTTAATCACATTATAAAACTATAGGACCAAGTTATGTAAGAA atcaaaatagtttttatttttgggttcgAGAGTCTTAGCAGGCTAAAAgtccagttttattttttgggCCAAGTTTAAGTTCTTTTCTATCGATTtctct - 45938_PtRNAdb chr-9.trna115-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 115 13369959 13369888 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 94.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GTTCTTCTTTAGATTATAAGTTATTACTAATTATTATTCTGAGAGCATTGTTGTTCagtatacaaaataaatattaatatgtgacTAAATTGTCAATTGA aTTTTATTGCTCTTTTgggtttttcttattttgccACTTACAAGTGTTTCACACAACATGAGATTACATATATTACACACCTACACCTTACCTATGTTCT - 45939_PtRNAdb chr-9.trna116-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 116 13112283 13112211 Val TAC 0 0 77.8 43.10 34.70 Inf Val 106.5 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTCAGTCTTACACACTGAAGGtCCCCAGTTCGATCCTGGGCAGCAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tatttaagTAATTGCCTTTAATTAACTAGTAATCCGCCGAcgtcaattcaaatttttttctacaatttaattttagttagtatGTAAAAGGTTCCAACTT AtattgttctttttcttcttactGAATTTTCCTAATATGAGTTTTAATGCTATTGATTGCGTGCGCTTAGAATTTGGGGATTGGTAAAGATTTTCAGTGA - 45940_PtRNAdb chr-9.trna117-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 117 12624906 12624833 Ile TAT 0 0 85.9 70.60 15.30 Inf Ile 103.9 Phanerogamae -NA- Dicot GGTCCCGTAGCTCAGTTGGTtAGAGCGTTGGTCTTATGAGCCGAAGGtCGCGGGTTCGAGCCCCGCCGGGACCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTAGTTTGATACCCAATTCTTATATTATGCactaattttgaataaaaacatttatttcatttaacctaattaaaatataaattaaatctaatatcaACAA TTTTTTCTACTTAAGAGACTTGGCAGTTTAAAGTAGATTtagtttttatcatttatgAGTTGTAGTTTAGTTGTTTAAAGTATGATCAAATGAATCGCGC - 45941_PtRNAdb chr-9.trna118-Arg-ACG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 118 11977680 11977608 Arg ACG 0 0 72.0 49.70 22.30 Inf Arg 93.9 Phanerogamae -NA- Dicot GACTCCGTGGCCCAATGGAtAAGGCGCTGGTCTACGGAACCAGAGAtTCTGGGTTCGATCCCCAGCGGAGTCG 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GTGTTTTCTCGTCTTTTGACCCATATGGATCAACCTTGTATCGGACCTTAGATCTCACTTTTGATGATATAGTAAAAATAGCCACTTCCTTTCAAAAATT tttttcttaatttttcaacAGGATTGCCAATTAAAAAGCTTCAGGTTTTTCTTTGCGACTTGAAGGAAATTTTCTCTCAGCAAAATGAGGGCTGCCACTT - 45942_PtRNAdb chr-9.trna11-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 11 6942483 6942554 Asp GTC 0 0 67.8 44.80 23.00 Inf Asp 92.9 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGCGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CAGTTGTTACAACGTGTATCAAACTAGACGTTGTTCTATTAAAGCTTCTCTTAAatgctttttatttataaaataactttGAAGACCTCTCATCAACAAG aAACGCTTTTTTTCCCCCCTGCAAAAAAGACATCACTGGGCATGGAATTCGTGCCTGTCTTGTGTGATGTTGGTTTCAGATTTTCGTTGTTGTTAGAGGT + 45943_PtRNAdb chr-9.trna120-Lys-CTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 120 10323165 10323093 Lys CTT 0 0 86.8 66.60 20.20 Inf Lys 107.7 Phanerogamae -NA- Dicot GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGtCGTGGGTTCGAGCCCCACGGTGGGCG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TATTTAGTTTcttaataagaaataatttgtTTTGCTTGACTACAGATTAAGCAGAACTAATCctttcttaataaaaaaaccttACAATCGAAAACTAACA AAAAGCATTATTCTATGCGATTGGACTATTTTCCTTTGGGCCGAATGATCAATAATGCTGGCTCCCTCGATGCTCCAAACCGGTATATGGATCTGCCCAC - 45944_PtRNAdb chr-9.trna121-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 121 9573854 9573784 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ATGGCCAAGACAAGTTAATCAAatgcttaattaaaaattaaaaaagcaGCGAATGAAAACTAAGAATAAATACATCTTAAATAGCCCAAATAACCAACAA GCCATAGAAGCTGTGATGACGGTTGCGCTAATCGGGATGGTAGGGTCTATCCCATCTGTCTGATTTTCCGACGAGACAAAGCGCTTCTGAGCTTCaattt - 45945_PtRNAdb chr-9.trna122-Val-TAC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 122 6574682 6574610 Val TAC 0 0 63.7 33.70 30.00 Inf Val 88.1 Phanerogamae -NA- Dicot GTTGCTGTGGTGTAGTGGTtATCACGTCAGTCTTACACACTGAAGGtCCTCAGTTCGGTCCTGGGCAGTAACA 73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTAAATCTTCTTTGTAATAAATGCGAAGATGAAGACCGTTGCCATGTGAGTCTCGTAATTTCgaatattaataaaacaaatcattttTCTCACACGAGGG GTTTGTCTTTTTTATAGGATAGCAAGTTTAGAATATAAAACACAGTAGAGCCCATAGAGAATAGAtgtttcagataaaattaagCAATCTAATCATGCTT - 45946_PtRNAdb chr-9.trna123-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 123 6220316 6220227 Tyr GTA 6220279 6220263 74.3 42.80 31.50 Inf Tyr 111.8 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCGCTGGTTCGAATCCGGCAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>........................<<<<<.....>>>>>.......<<<<<<<<<<<<. CATTAACTTCTCAATTAATAATAGATCAATATATTTAACTTTCAAAAATCAGTATACGTAATATTGTCCATATATTGTTATTTGCTATATTTTAATCAAA aatttttaattaatttttcctttAGACCTCCTCAATCCcattcaaattaatccctcttaaaagaatttaaagtaATGTAATtcctattaattttaaaatg - 45947_PtRNAdb chr-9.trna124-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 124 2774842 2774770 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATCATGACTTCAACAtcaattatgaataaaataggtgttatactaaatttaaaaagaaaaaaaaagtagatttAGGGAATTATTGAGAAAAAAGAAACGA TTTCGttgttcttttcattttttattttctagcgTGAACTGTAAAGATTCTCTTCCCTCCATCACAGCGTCGTTTTAGTTTTGCCTCTCGACAAGCGTGG - 45948_PtRNAdb chr-9.trna125-Ser-AGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 125 1433503 1433422 Ser AGA 0 0 77.1 42.80 34.30 Inf Ser 110.5 Phanerogamae -NA- Dicot GTGGGCGTGCCGGAGTGGTtATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCTCACG 82 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. CATTGTCTCAAGATCGATTGcaatttatgatttgatttaaaGTTGCTGTTTATTGTGAGGTtgagtaaataaataaactaagctGAAAGCTTACAACTCG tttttattttgttttccttttttatttttgaatcaaATTTGACAATAGTAACTGATGAGCCCATTTCTATTTGTAGTTAAGTTAGAGGTGGAAGAACTTT - 45949_PtRNAdb chr-9.trna126-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 126 1401752 1401671 Ser GCT 0 0 75.1 40.40 34.70 Inf Ser 101.3 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGTTCATCCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<..>>......<<..>>>>>.......<<<<<<<<<<<<. CTTCTACTACGAATAGCTTAAACAAACAtgaaacattccatggcaaatCCACTTCCTGCATTACCAATAGTTAAATTGGAGTGACAGATTTGACATCCAA GTTACTTTTTGTTTCAGATTCTAATACTATGTTCTGTTACTGCTAACCAATTTATCTACATTCACTTATTGATCTTTGAACATGTCTTCCTAATCTCTCC - 45950_PtRNAdb chr-9.trna127-Glu-CTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 127 1399438 1399366 Glu CTC 0 0 74.4 48.60 25.80 Inf Glu 96.7 Phanerogamae -NA- Dicot TCCGTTGTAGTCTAGGTGGTtAGGATACTCGGCTCTCACCCGAGAGaCCCGGGTTCAAGTCCCGGCAACGGAA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AATACCTGTAATAAATGGTTGACATACTAATTTCTAAGAGCAGAGATtcattttcgttaaaaaataaatatataaaattcaaagcAGCGCTAGTTACAAA taaattttgggtttatcaTGTCGACTTTTAGCTTCACAAATATGAAGTTTAGCctcaatatttttattcttaccaATTAGTGACGGAAAACCTAGATACG - 45951_PtRNAdb chr-9.trna12-His-GTG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 12 7341145 7341216 His GTG 0 0 63.3 34.30 29.00 Inf His 87.4 Phanerogamae -NA- Dicot GTGGCTGTAGTTTAGTGGTaAGAATTCTACGTTGTGGCCGTAGAGaCCTGGGCTCGAATCCCAGCAGCCACA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CTTGGAAAAGTGTGAATAAACAAGTATATGCCGAGTTCTCGAGCGTGGCtccatatgtttttatttaataattttacttacATCCAATCCCATCAATGAT ttttttgatttttcttctcttcctcccgTGTTCTTTTTCATGAACCTAACAAAAAGCCATTAACCCTAACGGCCCTTGTCTATCCAGTTGAGACCAAAAA + 45952_PtRNAdb chr-9.trna13-Tyr-GTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 13 8105019 8105111 Tyr GTA 8105056 8105075 71.3 38.00 33.30 Inf Tyr 104.9 Phanerogamae -NA- Dicot CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTAGGtCACTGGTTCGAGTCCGGTAGGTCGGA 73 >>>>>>>..>>>>........<<<<.>>>>>...........................<<<<<.....>>>>>.......<<<<<<<<<<<<. AAACTAAGCAAAGTCCTTCGATGCTTTTTCAACAAACCCCAGCATGGGAGTCAGCAGCTGCCTAGATCATAAATAGAAAACTCAACGATCCGTCTCAGAA AACCTTTTTTCCCCCACACTTGCTCTGAAAAGAATCTTTTAACATTCTCCAATTGCCAAATAGGATTTGGCTGCATCATCACCGCTCCCAGTATTTCCAA + 45953_PtRNAdb chr-9.trna14-Gly-GCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 14 8248803 8248873 Gly GCC 0 0 66.5 44.80 21.70 Inf Gly 94.4 Phanerogamae -NA- Dicot GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGaCCCGGGTTCGATTCCCGGCTGGTGCA 71 >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TACTAAGCTGCTAAGATCCTTCTTGAATGTGTGGTTCAAGTCTCCCGACCAATGATATGATACATactattaaaacaattttagttTCTAAAAAGAATTA ATTGTTATTTCAGTTTTACGATATTTTGTCAATGAAACTCTCTTACAGTTTCTGACATGGATTTTGTTTTATCAAATGCTGGCTCTTGTTTTCCTGATCC + 45954_PtRNAdb chr-9.trna15-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 15 9693134 9693207 Pro TGG 0 0 51.6 29.60 22.00 Inf Trp 54.3 IPD:-3.80 Phanerogamae -NA- Dicot AGGGATGTAGCGCAGCTtGGTAGCACGTTTGTTTTGGGTACAAAATGtCATGGGTTCAAATCCTATCATCCCTA 74 >>>>>>>..>.>>.........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGAGGAAATGGAAAGATCCGTTTTGCATATCAATAGATAAAATAAAGGTGTGGAAAACAAGACAGGGATTCTCTACAATGACATCGTAGGCCAATTGAA CCTATTACTTCTCCTTTGAGCAGTAACGAGGGAGTCGttttagattgattaaaattaagcatacataatCTATCATTTTCTCATATCATATATGGTATAT + 45955_PtRNAdb chr-9.trna17-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 17 9862932 9863003 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. TCCTAGTAGATATATTCAAGCCTCCACTTTCAATGTACAAAAAATGAGACATGTTAtcggaaaaaaataatataatagctTGCCCAGTTCTTTCAACAAA gTTTTTTCAatgatatattttcttttcttttcaatagttagtgaaataaatttatctaaataaatatattcatataaaagtATGAGAGAGGTTATTCTCg + 45956_PtRNAdb chr-9.trna18-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 18 11095984 11096065 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. ggattatgattttaaaatttacaggTAAATGTGTTGTACTTCCCATTTTCAAGGTCAGGAACAAGCTATTTATAGTCATATGTAAGCTTCTGTTAATAAA gttttcttctctttttatatCCCATCCTCAGAAGGCGTCGCTTTCTCTTTGGACTGTTGTTAATTGCGCAAAATTGAAGGCATAACTATACAATGGTAGT + 45957_PtRNAdb chr-9.trna19-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 19 11098255 11098336 Ser GCT 0 0 79.0 43.10 35.90 Inf Ser 108.6 Phanerogamae -NA- Dicot GACGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGTCG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. atgattttaaaatttataggcAAACGTGTTGTACTTCACATTTTCACGGATTTTCCAGGAATAAACcatttaaatttatagataAGCTCCCATCAACAAT tttgtttttatttaattttaatttttatgggtaaactataaaaatagtcacttttgtttacctcaaattacattttagtcatttttgtttgaaatattac + 45958_PtRNAdb chr-9.trna1-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 1 481098 481170 Arg TCT 0 0 70.7 50.70 20.00 Inf Arg 91.3 Phanerogamae -NA- Dicot GCACCCATGGCCTAATGGAtAAGGCGCTTGACTTCTAATCAAGCGAtTGTGGGTTCGAGTCCCACTGGGTGTG 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. tttcttgaaattaatATCTAAATTGATATGCATTGCTTTAAATTTggtattttctaatttgtaacgttatatatattatatatgctAACCTTATAACAAG AACGTTTTTTTTTCCTGCCGTtcgaaatatataaaaatttaaaaatctaaatatatattaaaactttataaaataaattttcaaaaagtatatttatatt + 45959_PtRNAdb chr-9.trna30-Thr-TGT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 30 25466447 25466518 Thr TGT 0 0 79.3 49.30 30.00 Inf Thr 92.3 Phanerogamae -NA- Dicot GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGtCTGTAGTTCGATCCTGCATGGGGGCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aataataaaaatataaacatccCACTATCCGAGGATGGAGAAAGCTTATTGAGGTTTACAAGTTGTACAAATAACTTATGTTTGGAACGGAGTCTCAAGA TTTtcgtttttgttgtttttttgtatGGCTATCAGAGACGAATGGAAGAGGAATAACAAAAAGCTAGATttggatttttaattagaacaaTGACGAAGAT + 45960_PtRNAdb chr-9.trna31-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 31 27313184 27313257 Ile AAT 0 0 79.9 56.50 23.40 Inf Ile 104.5 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAAACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAACCTAGATGGGCCACTAAATGCaacttcctttatttttttgggaaaacggcaacgttttatattatttattaaaacagAATTTAGAATGAAAATCAAC TTAAATGatttatctttgttttttttggaaaaacggaatttgttttgttttaaaaaatcagAATTTAAAAATGACAACAAAGGCCTATTAGCTCAGCTGG + 45961_PtRNAdb chr-9.trna32-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 32 27313339 27313412 Ile AAT 0 0 79.3 55.80 23.50 Inf Ile 104.3 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCGAAACCTGCATGGGCCATTAAATGatttatctttgttttttttggaaaaacggaatttgttttgttttaaaaaatcagAATTTAAAAATGACAACAAA TTAGTAATTCATTTGTAGTTTTTTGGAAAAACGGAAATTGTTTtgctttaaaaaacaaatttttaaaaactgaTAAGAAAGGCCTATTAGCTCAGTTGGT + 45962_PtRNAdb chr-9.trna33-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 33 27313493 27313566 Ile AAT 0 0 81.8 58.30 23.50 Inf Ile 106.8 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTCGAGACCTGCATGGGCCATTAGTAATTCATTTGTAGTTTTTTGGAAAAACGGAAATTGTTTtgctttaaaaaacaaatttttaaaaactgaTAAGAAA ttagtatttcatttttttttacttttcggAAAACGGCAACGTTTTTGCTTTAGAAAAAACGAATTTAAAAACTGATAAGAAGGCCTATTAGGTGCTAATA + 45963_PtRNAdb chr-9.trna34-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 34 28509364 28509437 Ile AAT 0 0 81.8 58.30 23.50 Inf Ile 106.8 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTACTAAACTTCTGTAACTCAGGCTATCTATCTATTCGATTGGTGAGATGAGCTgttctttttgtattttatcaACAACAAAATTTCTTACGTATGCTGT ATcttattttggtttgttttttgttttcttttcaacGGTGTCGTTTTCTCATTCACAGCCCTTTGCGTCTTTTAACTAAACGGTGTCGTTAATTAATTTT + 45964_PtRNAdb chr-9.trna35-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 35 28856826 28856899 Asn GTT 0 0 61.0 38.40 22.60 Inf Thr 61.2 IPD:-2.80 Phanerogamae -NA- Dicot GCTAGAATAGCTCAGTTGGTtAGAGTGTGTGGCTGTTAACTATAAGTtTGAAGGTTCAAACCCTTCTTCTAGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTACATTTATAATTGTGTTGATTCATAGTCTTGACGCAAGCACGGTGGGGTGCGATCAATAtcctttattaattaattaaaattttaaatgttataatat aaattaattttatttttaaattggacACTCTTTAGTGTTTCAACTTTGCtcttttttctcacttttattattaataatgtttttatttttggccctttta + 45965_PtRNAdb chr-9.trna36-Asn-ATT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 36 28866848 28866921 Asn ATT 0 0 73.1 46.80 26.30 Inf Ile 75.0 IPD:-5.10 Phanerogamae -NA- Dicot GCTAGAATAGCTCAGTTAGTtAGAGCATGTGGCTATTAACCACAAGGtCGGAGGTTCAAACCCTCCTTCTAGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. atatttataattatatttgtgttGATTCATAGCCTCGACGAATGCACACTAGGGTGCCattaatatgatttataaatttaatttttaaacattataatat aaattaattttatttttgatttgattcCTCTTTAGTGTTTCAACGTTGctctttttttcacttttattgttaatattatttttaattttttccctctttc + 45966_PtRNAdb chr-9.trna37-Asn-ATT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 37 28867835 28867908 Asn ATT 0 0 44.4 17.90 26.50 Inf Ile 57.8 IPD:-30.40 Phanerogamae -NA- Dicot GCTAGAATAGCTTAGTTtcTtAGAGCATGTGGCTATTAACCACAACAtTGGAGGTTGAAACCCTTTTTCTAGCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aatgttataattgtaTTTGTGTTGGTTCATAGCCTTGGCACACGCACGTCGGGGCGCCGTCAATAtgctttataaatttaattatgaaacaTTATAATAT aaattaattttatttctaatttggaCCCTCTTTAGTGTTTCAAGGTTACTCTTTCTTTCActtttattactaaaattgtttttattttttgccctctttc + 45967_PtRNAdb chr-9.trna38-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 38 29255150 29255223 Ile AAT 0 0 79.3 55.80 23.50 Inf Ile 104.3 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTTCGAGACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATTGGTACATATGCATAATATCTTATAACAATGGAAAGCGGTTGGTAGTGATCATTTTTGTTTATACTACAAATAAGATGTTTTGGAAGAAAAGCTCAAC TTGCCCTGCATGGGCCAAtagatatgaattttatttttatgaaaacgtTGTcgtttattatttgaaaatttattattgctttttaataattattattgta + 45968_PtRNAdb chr-9.trna39-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 39 30831820 30831891 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CTAAAACGACCGATTAATCTACGGtctcttctttgcttcttttgcGGCCAAATTTGGCATGTTCCAAAgagtaaaatgaattttaaaacctGATCATCAA tTTTAAGAAGACCTTTTGTTTTGTCAAACTTCAATTAACTTCAATGACGGGTGTCAATTaaggaagaaaatgagagaaattTGATAGAAAAGATGAACGA + 45969_PtRNAdb chr-9.trna3-Arg-TCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 3 1181413 1181486 Arg TCG 0 0 82.3 61.00 21.30 Inf Arg 91.9 Phanerogamae -NA- Dicot GACCGCATAGCGCAGTGGAttAGCGCGTTTGACTTCGGATCAAAAGGtCGTGGGTTCGACTCCCACTGTGGTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. agctgAAGAATAATTCGATTAACCATCACAAGCAaagttgaatttaaattatattgagGAAATCATTTTgataagatattaaaataaataataacaaaag ATGCTTTTTTTGTGTTCTTCATTTTTAGGCTTTCAATTTTATATAGGCCCAGCCATCATTTTTTTTGTGCAATAAGGTCAAATACATTGGATTCAATTTT + 45970_PtRNAdb chr-9.trna40-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 40 30840543 30840614 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 94.5 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTaAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. ACTACTCTAAATATTGTCCTCCCTTGGCTTCTTTTGTCCCTTTGCGGCCAAATTTGGAATATTACAACAATTAAGATAAATTGAACAGTACAGCAAGAAA attatttcttttctttttaatctttcTAGCTTTTGTTAGTGATGCAATCAGATAATCTACTTCCCTAAATGCTTATTTGGAGCCTTTTGGGACAGTGAAA + 45971_PtRNAdb chr-9.trna41-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 41 30871357 30871428 Asp GTC 0 0 69.8 46.80 23.00 Inf Asp 95.8 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGTGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CTAAAACGACCGATTAATCTACGGtctcttctttgcttcttttgcGGCCAAATTTGGCATGTTCCAAAgagtaaaatgaattttaaaacctGATCATCAA tTTTAAGAAGACCTTTTGTTTTGTCAAACTTCAATTAACTTCAATGACGGGTGTCAATTaaggaagaaaatgagagaaattTGATAGAAAAGATGAACGA + 45972_PtRNAdb chr-9.trna42-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 42 31905729 31905801 Arg CCT 0 0 66.9 46.30 20.60 Inf Thr 78.0 IPD:-0.80 Phanerogamae -NA- Dicot GCGCCTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAAGtCATAGGTTCGACCCCTATCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. ATATTCATCTTATATCAAAATCAATCTTACAAGTAACTTAAGGCTATAGTTAAAGTGAAAAATAAGTattcaaaaaagtaaaagtaagtTGGCAACAAAA GATATAAGATAATATTATTACATgggatttaaattattttataagtttactATTGATCGTTGCTGCTGTCTAATAGCTTCCTGAAatctctttattcttt + 45973_PtRNAdb chr-9.trna44-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 44 47541681 47541754 Asn GTT 0 0 79.6 52.30 27.30 Inf Asn 89.3 Phanerogamae -NA- Dicot GCTGGAGTAGCTCAGTCGGTtAGAGCGTATGGCTGTTAACCATAAGGtCAGAGGTTCGACCCCTCTCTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aaaataaaataacttaattatcCATAATTGTCAGAAAAACTAAAgccatcaaaattcaaataatgcGTTCTTATTGAATCGGAATAGCTCCTTAACAAGA CttactttcctttttcttttctttcataaatcgatgttttgaatgtttatCAATTGATCTatcatatatgaaaataataataattagaaattattgaata + 45974_PtRNAdb chr-9.trna46-Leu-CAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 46 54566423 54566503 Leu CAA 0 0 41.2 32.00 9.20 Inf Gly 48.6 IPD:-28.30 Phanerogamae -NA- Dicot GCCTTGGTGGTGAAATGGTaGACACGCGAGACTCAAAAACTCGTGCTAAAGAGCGTGGAGGTTCGAGTCCTCTTCAAGACA 81 >.>>>>>..>>>..........<<<.>>>>.........<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<.<. ATCGATCAATAGGAATACTCCAACACTCCACCTTTGTCATATATTCCATACATCACACTAGATAGTATCATATTCGTGGAATATGATTCACTTTCAAGAT TACTATTGAAAATGCTCATTGAATTAGAATAAGTTTGGCAGTGGATCATGAGATCTTGGTGATCTTCTTTATCTAATGAATTGGGAGTCTGCTTTGAAAT + 45975_PtRNAdb chr-9.trna47-Leu-TAG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 47 57396523 57396602 Leu TAG 0 0 69.5 48.50 21.00 Inf Leu 111.5 Phanerogamae -NA- Dicot GACAGTTTGGCCGAGTGGTctAAGGCGCCAGATTTAGGCTCTGGTccgaaaGGgCGTGGGTTCAAATCCCACAGCTGTCA 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...........>>>>>.......<<<<<<<<<<<<. TCAACCTCACACAACCGTTCGACTCAACTAAGTACCGTATCAAGGATTGCATTTAGAGGATTAATCGTTATATAGATTTTTATGCCCCCTTAAGCAATAA tttaaattttttgttaatattctCCTTTGTCCCTGTATTTTTGGGATTTctgaaatttagtccttttatttttaatttcaagaatttcaTCCCTCTACAT + 45976_PtRNAdb chr-9.trna48-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 48 60403440 60403527 Ser GCT 60403478 60403493 44.0 36.80 7.20 Inf Ser 50.2 Phanerogamae -NA- Dicot GGAGAGATGGCTGAGTGGActAAAGCATCGGATTGCTAATTCGTACTGAGGGTTCGAATCCCTCTCTTTTCG 72 >>>>>>>..>>>...........<<<..>>>>.......................<<<<....>>>>>.......<<<<<<<<<<<<. ataatctatatAACATAATCTAtataacaaagtaaaaaaaggcttttttcAAGCCTTTCTTTTTACGTGCTGTAACATAGTAATTATCTTTTCTCAATTA TTTTGGTTTTTGGTAGTGGAATAGATCAAATCCTAATACCATTTCTAAAAATGAAGCAAGGAACTCTCCCTTTTTTATTCTTCGTGTCCAGGATTACATC + 45977_PtRNAdb chr-9.trna49-Lys-TTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 49 66328015 66328087 Lys TTT 0 0 53.9 47.10 6.80 Inf Thr 53.3 IPD:-17.70 Phanerogamae -NA- Dicot GTTGTCTTAGCTTAGTTGGTAGAGCGTATGGCTTTTAACTATGTGGtTGTAGGTTTGATTCCCGCAAACAACA 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<.<<<<<. gatacAAGTAAGATAGCTTTATCCTGTGACACTTTAGATGCAATTTGAAAATTCCATGATCGGCAATAGCTTCCAAAAGCCTTGAAAGAATCTAATATAT aataataattatttttaatatcattattcttcttttattattatttatttaattcaaaattttaaaattttcatccaaatACATCCTTGACGAGGCAATT + 45978_PtRNAdb chr-9.trna4-Arg-TCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 4 1181740 1181813 Arg TCG 0 0 82.3 61.00 21.30 Inf Arg 91.9 Phanerogamae -NA- Dicot GACCGCATAGCGCAGTGGAttAGCGCGTTTGACTTCGGATCAAAAGGtCGTGGGTTCGACTCCCACTGTGGTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ataaataaataacaatgaaAAAGAGGTTTTTTCCCCTTATGAATCTTCATGAGGTTATAAATCTTTATGAAATCAAAATACTACACCAATGGCGTGTAGG ATGCTTTTTTGGTGTTCTTCATTGGGCTTTCAATATTATATAGGCCCAGTCATAGTTTTTTTTGTGCAATAAGGTCAAATACATTGGATTCAATTTTTAA + 45979_PtRNAdb chr-9.trna50-Sup-CTA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 50 67412012 67412084 Sup CTA 0 0 41.9 19.30 22.60 Inf Arg 41.9 IPD:-41.90 Phanerogamae -NA- Dicot GCGCTCTTAATTCAATCAGTAGAACATGGGTCTCTAAAATCCAATGtTGTAGGTTTAAATCCTACAGAGCGTG 73 >>>>>>>...>>>........<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. aatcgaaactctattttcaaattttcaataattaattcgATTAGCGCCCGTGCATATCGCCAAATTTTTAGGTCACtacattatttattatcataagAAA CTTCTACTTTTGTTAGGTAGAAAATTacaccaaattgaaaaaaatttgaacaacaattCAAATTTGACCTCcttagataaaattattaaatttaattaat + 45980_PtRNAdb chr-9.trna52-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 52 67571105 67571177 Phe GAA 0 0 45.8 29.00 16.80 Inf Phe 77.6 Phanerogamae -NA- Dicot GCGAGGATAGCTTAGTTAGGAGAGCGTTAGACTGAAGATTTGAAGTtCACGTGTTTGATCCACGTTCATCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. TAATTATCAtctaatgaacttgaattttgggTTGTTTGATCAAGTAAGGGAAATTCGATGCAATTCATATtcaatgtaattattatttatactcactATT ttttaaaacataaaggAGAGTGTTATACTAAATTCTTCAAGGGACATGTCTTCTATCCACTTTGACAACATTCTTAAAATATCCACACCTcaattttcat + 45981_PtRNAdb chr-9.trna54-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 54 67571940 67572012 Phe GAA 0 0 47.0 38.50 8.50 Inf Phe 71.7 Phanerogamae -NA- Dicot GCGAGGATAGCTTAGTTGGGAGAGGGTCAGATTGAAGATTTGAAGGtCACGTGTTCAATCCACATTCATCGCA 73 >>>>.>>...>>>........<<<..>>>>>.......<<<<<.....>.>>>.......<<<.<<<.<<<<. taattatcatttaatgaACTTGATTTTTGGATTGTTTGATCAAGTAAGGGAAGTTCGATGCAATTTATAGtcaatgtaattattatttatactcactATT TTTTAAAACTATCCATAAAGGAGAGTGTTAGACTAAATACTTAAAATGTCACCTGGTCTATCCACTTtaacaacattttaaaaatatccatacctcaatt + 45982_PtRNAdb chr-9.trna56-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 56 67582612 67582683 Phe GAA 0 0 40.3 19.30 21.00 Inf Phe 65.6 Phanerogamae -NA- Dicot GTGAGGATAGCTCATTGGGAGAGCGTCAGAATGAAGATCTGAAGAtCATGTGTTCGGTCCACGTTCATCACA 72 >>>>.>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. TTATCATTTAATGTACTTGAATTTTGGGTTGTTGGATCAAGGAAGGGAAATTCGATGGAATTAATACtcaatgtaattattattatttttacttatagTT ttttaaaaatatccatAGAGGAGGGTGTTAGACTAAATACTTGAAGAGTCACCTGGTCGATTCACTTTCactatatttttagaatatccATACCTCGGTT + 45983_PtRNAdb chr-9.trna59-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 59 67595013 67595085 Phe GAA 0 0 76.1 54.40 21.70 Inf Phe 115.3 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCACGTGTTCGATCCACGTTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. TCTGAAGGTCGCGTGTTTGGTCCACGCTGACcgcattttcattttttttctttaaaaaatataaattgaaacaaTAACCATCTAACTGCAATAAATAGTT CATTTTACTTCTCTTCTTGTTAAATCTAGACCGTCCGAATGATGAAATATGAGAAATCTCGACCGTCTAAAttcgttttcttcttcttcatttttttgtt + 45984_PtRNAdb chr-9.trna5-Pro-TGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 5 2273700 2273771 Pro TGG 0 0 69.2 36.90 32.30 Inf Pro 112.8 Phanerogamae -NA- Dicot GGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGAGTTCGATTCTCGGAACGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GCACTTTTCCATTCAAAAAAGATTTCAAAGAATAGGGTTGACCTATTAAACgtgataaaatttagaaatatattggTATATTGTGACAGCTTTAGCAACA ATTTATGAAGTTTAGcttttagctatttttattttcttaatttttttatttactaatccAACAGTGAGATGCCATATAATATAAGCGATTGAACGACAAC + 45985_PtRNAdb chr-9.trna60-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 60 67600208 67600280 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. TAGTTACTGGGCTCGCTCTGATAGATacctttaagaaaaaaaaagcctaTTGATTTACTTATGTAGATATATCATGTTTTACAAGATCCTTTACACGATT atttacttttatttctatttaaaatattttgattgaaatactAGCCATTTCCTTAAAGCAGAGTACTTGCGGGGATAGCTCAGTTGGGAGAGCGTCAGAC + 45986_PtRNAdb chr-9.trna61-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 61 67600349 67600421 Phe GAA 0 0 78.7 58.70 20.00 Inf Phe 108.7 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATTCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GAAGGTCGCGTGTTCGATCCACGCTCACCgcaatttacttttatttctatttaaaatattttgattgaaatactAGCCATTTCCTTAAAGCAGAGTACTT atttacttttatttctatttaaaatattttgattgaaatactAGCCATTTCCTTAAAGCAGAGTACTTGCGGGGATAGCTCAGTTGGGAGAGCGTCAGAC + 45987_PtRNAdb chr-9.trna62-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 62 67600490 67600562 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GAAGGTCGCGTGTTCGATTCACGCTCACCgcaatttacttttatttctatttaaaatattttgattgaaatactAGCCATTTCCTTAAAGCAGAGTACTT atttacttttttttctatttaaagtATTTAGATTGAAATAGTAACCGTTTCCTTAAAGCAGAGTACTTGCGGGGATAGCTCAGTTGGGAGAGCGTCAGAC + 45988_PtRNAdb chr-9.trna63-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 63 67600631 67600703 Phe GAA 0 0 68.9 49.80 19.10 Inf Phe 105.8 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTCTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<.<<<<. GAAGGTCGCGTGTTCGATCCACGCTCACCgcaatttacttttttttctatttaaagtATTTAGATTGAAATAGTAACCGTTTCCTTAAAGCAGAGTACTT atttacttttttttctatttaaagtATTTAGATTGAAATAGTAACCGTTTCCTTAAAGCAGAGTACTTGCGGGGATAGCTCAGTTGGGAGAGCGTCAGAC + 45989_PtRNAdb chr-9.trna64-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 64 67600772 67600844 Phe GAA 0 0 68.9 49.80 19.10 Inf Phe 105.8 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTCTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<.<<<<. GAAGGTCGCGTCTTCGATCCACGCTCACCgcaatttacttttttttctatttaaagtATTTAGATTGAAATAGTAACCGTTTCCTTAAAGCAGAGTACTT atttacttttttttctatttaaagtATTTAGATTGAAATAGTAACCGTTTCCTTAAAGCAGAGTACTTGCGGGGATAGCTCAGTTGGGAGAGCGTCAGAC + 45990_PtRNAdb chr-9.trna65-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 65 67600913 67600985 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GAAGGTCGCGTCTTCGATCCACGCTCACCgcaatttacttttttttctatttaaagtATTTAGATTGAAATAGTAACCGTTTCCTTAAAGCAGAGTACTT atttacttttttttctatttaaagtATTTAGATTGAAATAGTAACCGTTTCCTTAAAGCAGAGTACTTGCGGGGATAGCTCAGTTGGGAGAGCGTCAGAC + 45991_PtRNAdb chr-9.trna66-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 66 67601054 67601126 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. GAAGGTCGCGTGTTCGATCCACGCTCACCgcaatttacttttttttctatttaaagtATTTAGATTGAAATAGTAACCGTTTCCTTAAAGCAGAGTACTT atttacttttttttgtttaaaatatttaaattgaaatactAACCGTTTCCTAATAATAGAGTACTCGCGGGGATAGCTCAGTTGGGAGAGGGTCGCGTGT + 45992_PtRNAdb chr-9.trna67-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 67 67601309 67601381 Phe GAA 0 0 76.1 54.40 21.70 Inf Phe 115.3 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCACGTGTTCGATCCACGTTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. TGGGAGAGGGTCGCGTGTTCGATCCTCGCTCACcgcattttcattttttttccttttgaataTAATTTGAAGTAAAGCCATCTGAAGGCAAGAAATAATT ttttttttacttttctttttgttaaatcTAAACCGTCTAAAAGATGAAATACGTGAAATCCTGACCGTGTAAATGGCtttcccttttgtttttgttctat + 45993_PtRNAdb chr-9.trna68-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 68 68917443 68917524 Ser GCT 0 0 76.2 41.10 35.10 Inf Ser 105.6 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGATTTTCCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. GTGATCATCTATTCCTCCCACACCTAGCTTCAGCTATTTAGCTTGGACAGCatctaaaattatttgttattttaatcttaattttagtTGATAAACTAGT TTAATATTTTTGTCAACCCCAGATGAGATGCCCGCCACCGGCGACGTCAGGGGCGGGTATTAGTGTTGATGGAGCCTTCTTCGACAGTTGCGTTCTTGGT + 45994_PtRNAdb chr-9.trna69-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 69 68932143 68932224 Ser GCT 0 0 57.2 30.90 26.30 Inf Ser 84.9 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGATTTTCCCGCGAGAGTACGAATCTCTCAGCCGACG 82 >>>>.>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<.<<<<. GTGATCATCTGTTCTTCCCACACGTAGCTTCAGATATTTAGCTTGGACAGCATCtcaaattatttgttatttaaatgataattttagctGGTAAAGCAGT TTAATATTTTTGTCAACCCCAGATGAGATGCCCGCCACCGGCGACGTCAGGGGTGGGTGTTGGTGTTGATGGAGCCTTCTTCGACAGTTGCGTGCTTTGG + 45995_PtRNAdb chr-9.trna6-Asp-GTC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 6 3028794 3028865 Asp GTC 0 0 67.8 44.80 23.00 Inf Asp 92.9 Phanerogamae -NA- Dicot GTCGTTGTAGTATAGTGGTgAGTATTCCCGCCTGTCACGCGGGCGaCCCGGGTTCGATCCCCGGCAACGGCG 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AAACAAGAGTAGATAAGACGTGAGCTTTGAACCAAAGGAACATTATCTTCAAGAAGAATATAAACTTATATGAATTTTTCTGTCGAATGCTATCAATCGG tTAACGTTTTTAATTTTCAGACGACCCTGGCCCAAGCTGAGAATCGGATCCCTCCATCACCGACtgaaataaatactttttttttcttatgttttaaata + 45996_PtRNAdb chr-9.trna70-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 70 68955278 68955359 Ser GCT 0 0 70.0 39.70 30.30 Inf Ser 96.0 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGAATTTTCCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>.>...<.<<..>>>>>.......<<<<<<<<<<<<. TTAACTGATCATCTATTCTTCCCACACGTAGCTTCAGCTAGCTTGGACAGCATCtcaaattatttgttatttagaTGATAATTTTAGCTGGTAAAGCAGT TTAATATTTTTGTCAACCCCAGATGAGATGCCCGCCACCGGCGACGTCAGGGGTGGGTGTTGGTGTTGATGGAGCCTTCTTCGACAGTTGCGTGCTTTGG + 45997_PtRNAdb chr-9.trna71-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 71 68960579 68960660 Ser GCT 0 0 76.2 41.10 35.10 Inf Ser 105.6 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGATTTTCCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AGTTTCTGTAGGAGCAGATTGCATAAACTTCTTTTGCTCCACAACCTTTGCATTTTCGACAAGGCATCTCAAAGTATTTATTAACTTAACATTCACTGAA ttaattattttactattttttttggtttaaatttgcttttagtccttatattatttttggataaacTACATTATAggtcattgaattattaattaaatta + 45998_PtRNAdb chr-9.trna72-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 72 68974623 68974704 Ser GCT 0 0 71.5 36.40 35.10 Inf Ser 98.2 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGGGGTtAAGGCGTGTGCCTGCTAAGTACATGGGATTTTCCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. CTGATCATCTATTCTTCCCACACGTAGCTTCAGCTATTTAGCTTGGACAGCATctcaaattttttgttattttaaacttaatttcagTTGGTAAAGCAGT TTAagtattttactattttttgtttttagtccttagtttatttttggttaaactatattaaaaaggtcattgaattattaataagtttatattcttgtta + 45999_PtRNAdb chr-9.trna73-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 73 68977387 68977468 Ser GCT 0 0 47.6 21.80 25.80 Inf Ser 56.1 Phanerogamae -NA- Dicot GTTACTTTGGCCGAGTGGTtAAGGCGTGTGCTTGCTATGTACATGGAATTTTTTCGCGAGAGATCGAATCTCTTAGGCGATA 82 >>>.>>>..>>>..........<<<.>>>>>.......<<<<<..>>>....<<<..>>>>>.......<<<<<<<<.<<<. gaaaaaacaaaaatacttgACTccatcttttatcttttttggcTGAATATATATTTTCGATGGTATCTCTTAATTTAACATTCATCATAGACTTGTGAAG TTAAAATGTgtgatttagtctttgtacattAAAAGTTAAGatttcaatctttttatttttacaatttaaaaagttttagtCCAATCATTAATGTTGTTTG + 46000_PtRNAdb chr-9.trna74-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 74 68981103 68981184 Ser GCT 0 0 76.2 41.10 35.10 Inf Ser 105.6 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGATTTTCCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. AAGTGATTATCTGTTCTTCCCACACGTAGCTTGAGCTATTTATTTTCAACGTGGTATCTCAAATTATTTCTTAGTTAACATTCATTAAAGAGATGTGAAA TTAAATTTTTGTCAACCCCAGATGAGATGTCCGCCACTGGCAACGTCAGGGGCGGATGTTGGTGTTGATGGAGCCTTCTTCGACAGCTGCGTGCTTGGTC + 46001_PtRNAdb chr-9.trna75-Phe-GAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 75 69199321 69199249 Phe GAA 0 0 78.3 58.40 19.90 Inf Phe 113.2 Phanerogamae -NA- Dicot GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGtCGCGTGTTCGATCCACGCTCACCGCA 73 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. AGGATTTTATTCAGCGACATGAAATCGTCCACTTGGTTTGACAGTGGTATTGCCTGACCCTGtcacattaaaataatttagaaataaaaaatatcagtTA gttattgattttgtttttgttttcaacaGCCCAGTGTGGGCTCAAGctattcttaataattttgtaaGCAAACACAACGAAATTAGGCCGAACAAATAAA - 46002_PtRNAdb chr-9.trna76-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 76 69104717 69104637 Ser GCT 0 0 42.1 23.90 18.20 Inf Ser 70.9 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCAGCTAAGTACATGGATTTTCCCGCGAGAGTTCGAATCTATAAGGCGACG 81 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<..>.......<...>.>>.......<<.<.<<<<<<<. GTGATTATCTATTATTCCCACACGTAGCTTCAGCTATTTAGCTTGGACAGCATCTCAGATTATTTGTTATTCTAATCTTAATTTTAGTTGATGAATTAGT ttaaaatttttgtcaACCCAGATGAGATGCCCGCCACCGGCGACGTCAGGGGTGGGTATTGGTGTTGATGGAGCCTTCTTCGACAGTTGCGTTCTAGGTC - 46003_PtRNAdb chr-9.trna77-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 77 69089088 69089007 Ser GCT 0 0 42.4 28.40 14.00 Inf Ser 62.5 Phanerogamae -NA- Dicot GTTGCTTTGGCAGAGTGGTtAAGGCGTATGCCTGCTACGTACATGGGATTTTCCTgCGAGAGTTTGAATCTCGCAGGTGACG 82 >>>>>>>..>>............<<.>.>>>.......<<<.<..>>>...<<<...>.>>>.......<<<.<<<<<<<<. atattattgccTAAATATTAACTGACCATCTATTCTTCCCACACGTAGagcatttaaaattatttgtacttttaatcttaatttcagTTGATAAATCAGT TTAATATTTTTGTCAACCCCAGATGAGATGCCCGCCACCGGCGACGTCATGGGCGGGTGTTGGTGTTGACGGAGCCTTCTTCGatcttttcaactttttc - 46004_PtRNAdb chr-9.trna78-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 78 69059819 69059738 Ser GCT 0 0 58.1 38.30 19.80 Inf Ser 79.1 Phanerogamae -NA- Dicot GTCGCTTTGGCCCAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGAATTTTCCCGCGAGAGTTCGAATCTCTCAGGCCACG 82 >>.>>>>..>>>..........<<<.>>>>>.......<<<<<.>>.>...<.<<..>>>>>.......<<<<<<<<<.<<. GTGATCATCTATTCTTCCCGCACTTAGCTTCAGCTATTTAGCTTGGACAGCATCTCaaattatttgttattctaATCTTAATTTTAGTTGATAAAGCAGT ttaaaatttttgtcaACCCCAGATGAGATGCCCGCCACCGGCGACGTCAGGGGCGGGTATTGGTGTTGATGGAGCCTTCTTCGACAGTTGCGTTCTTGGT - 46005_PtRNAdb chr-9.trna79-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 79 69048903 69048822 Ser GCT 0 0 67.0 32.30 34.70 Inf Ser 98.6 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGATTTTCCCGCGAGAATTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>.........<<<<<<<<<<<. ATCTACTTTAGATGAACTAAAATAGTCTATTCATCAAAAATTTGCCTTAAAACATTCATATTGGAATGTTGAAAGGTTGTATTATTTAGGTTAAACCAGT TTAAATTTTTTGTCAACCCCAGATGAGATGCCCGCCACCGGCGACGTCATGGGCGGGTATTGGTGTTGACGGAGCCTTCTTCGACAGTTGCGTGCTTGGT - 46006_PtRNAdb chr-9.trna7-Ser-CGA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 7 3703644 3703725 Ser CGA 0 0 76.5 44.60 31.90 Inf Ser 118.0 Phanerogamae -NA- Dicot GTCGATATGTCCGAGTGGTtAAGGAGACAGACTCGAAATCTGTTGGGCTATGCCTGCGCAGGTTCGAATCCTGCTGTCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. CGCAAATGGCTCGTAAATGTGATGGGATGTTATTTAACTTTTCAAGGCCAAAGAATgatattctataaatattttggaattaacTCGCTATCAGGCGACC atcctttttattatttctttctcaactcttcttttttgataattttctgaACTCATGTTTAAGGTTATGCTAATGAGACTGTAATATCTAAGAATCCTGA + 46007_PtRNAdb chr-9.trna80-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 80 69019992 69019910 Ser GCT 0 0 75.8 41.00 34.80 Inf Ser 101.3 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGATTTTTCCCGCGAGAGTTCGAATCTCTCAGGCGACG 83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. AGTGACCATCTATTCTTCCCACACGTAGCTTCAGCTATTTAGCTTGGACAGCATCtcaaattatttgttattttaatcttaatttacgCTATAAATTAGT ttaaaatttttgtcaACCCCAGATGAGATGCCCGCCACCGGCGACGTCAGGGGCGGGTATTGGTGTTGATGGAGCCTTCTTGGACAGTTGCGTTCTTGGT - 46008_PtRNAdb chr-9.trna81-Ser-GCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 81 69003293 69003212 Ser GCT 0 0 76.2 41.10 35.10 Inf Ser 105.6 Phanerogamae -NA- Dicot GTCGCTTTGGCCGAGTGGTtAAGGCGTGTGCCTGCTAAGTACATGGGATTTTCCCGCGAGAGTTCGAATCTCTCAGGCGACG 82 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. CTGATCATCTATTCTTCCCACACGTAGCTTCAGCTATTTAGCTTGGACAGCATCCCaaattatttgttattctaATCTTAATTTCAGTTAGTAAAGCAGT ttaaaatttttgtcaACCCCAGATGAGATGCCCGGCACCCGCGACGTCAGGGCCGGGTGTTGGTGTTGATGGAACCTTCTTCGGCAGGTGCGTGCTTGGT - 46009_PtRNAdb chr-9.trna82-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 82 68408643 68408572 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gttatttgaattattatgttaaattcgGTAAGCTTTATCGTTAAATcgacaaacttactaagctttatcaTTAAACAATTAAGTAACAAATGAGCATCAA TTTttgacaataatatttttttacttgtttttgcTAAGACCCTTGAACTTTtatgaaaaaatcaattaagccctttgACCAATGTTTTCTGTCTTAACCC - 46010_PtRNAdb chr-9.trna85-Gly-TCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 85 66852241 66852170 Gly TCC 0 0 73.9 46.20 27.70 Inf Gly 85.6 Phanerogamae -NA- Dicot GCGTTTGTAGTCCAACGGTtAGGATAATTGCCTTCCAAGCAATAGaCCCGGGTTCGACTCCCGGCAAACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AGAATTGAGAGGGAGTGGAGAGATGTTTTTACCAATCAATCTACATTAAAAGCCTTTTAAAATATtcgaaattaaaataacttgaaaaccaTGGCATCAG attaatttttgaaattaatttttaatttcaagcaatttcctttttttggtTCCCTTTTTCTCTCCGATGTAATGCAGGTGGTAACCGCTGAGTGTTTGTT - 46011_PtRNAdb chr-9.trna86-Gly-CCC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 86 66782553 66782483 Gly CCC 0 0 66.0 29.20 36.80 Inf Gly 87.4 Phanerogamae -NA- Dicot GCGCATCTAGTGTAGTGGTATCATAGTACCCTCCCACGGTACTGaCCGGGGTTCGATTCCCCGGATGCGCA 71 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. CCACTAAACGTGTTCTTAGTGCTATTACTCTTCTACTATTAAGTTTGGATATTggtatgttaatattattaaatgaaacagAAAACTCACAAGCATCCAA aatcatttattattacttttaccGCTTAAAATTACACCCGGAGAAAACAAAGGCCAAATATGAATTCCCCCATTTGCATTCAACGAGTCAGCCCCAAACT - 46012_PtRNAdb chr-9.trna87-Ala-TGC NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 87 65929320 65929248 Ala TGC 0 0 70.0 45.30 24.70 Inf Ala 100.6 Phanerogamae -NA- Dicot GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGcACGGGGTTCGATCCCCCGCATCTCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCTGTTCCAGCATCACCTAAACCGGGTGGCTGTCACATTCTTCCATAATGTATTACCttaatatagttttattattataattctaTCTCATTAAAGCAAA tttctttttatttctgttttgaTGGCAACATATTACTACCAAATTTGACAGACCAAATTTTGTTCTTACATGGAGTTTAGTTTTATTTAGGTCAGAAATC - 46013_PtRNAdb chr-9.trna88-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 88 65275469 65275398 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAAACATGATTGGAACCTTTCCCTTCGTTAagatttattctttttctctaaagtttaatatttgaataagaTTTTATTATCATGAATAAATAGCCAATTA TATTTCTTTACGTTTTCCCAAGATTTCGGAATTTATGGCCGTTTAGAGTAAGCAATTTCTACTGTACCTTGGAAGTTAGCCCAAAATGATAGTGGACTCA - 46014_PtRNAdb chr-9.trna89-Ile-TAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 89 60602183 60602112 Ile TAT 0 0 39.6 14.30 25.30 Inf Gln 43.3 IPD:-35.50 Phanerogamae -NA- Dicot ATGACCATTGTCTAATGGAtAGGATAGAGGTCTTATAAACCTTTGGTATAGGTTCAAATCCTATTGGACACA 72 .>>.>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<.<<.. aatacaatttttcacatgttctttagtttttccaaccaagagaaaagaaaaaaccaaacaagagaaaaaaagtcaaaatgtcaaaaaatcATAATGAAAA atttaaaattgatttctCTATATTCCATTAAGTtagaattttctatttataattgTTTCTAAAGTCAAAAACGCCCAATTTGGTCCTAAATAGCTTCTAT - 46015_PtRNAdb chr-9.trna8-Trp-CCA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 8 5528041 5528112 Trp CCA 0 0 75.8 51.20 24.60 Inf Trp 105.6 Phanerogamae -NA- Dicot GGATCCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCGATTCACGTCGGGTTCA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAAGAAAAATATCAGCATTTTTTTTCCGTTTTTCTGAGGAATAAAGAAATAGAACTAAAACAGAAAACTAAAGTATATAACCCCAGCATATGCTCCAACG ATCTCCCGAAATcggatttatttttaattttttttggatttggaCTGCATCTATTTTGGGCTATGGTGTGAAAGAAGGCTGCTAAGACCCAAAGTAGGTT + 46016_PtRNAdb chr-9.trna90-Arg-TCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 90 60389309 60389238 Arg TCT 0 0 42.8 22.30 20.50 Inf Gln 45.6 IPD:-6.10 Phanerogamae -NA- Dicot GCGTCCATTGTCTAATGGAtAGGACATAGGTCTTCTAAACCTTTGGTATATGTTCAAATCCTATTGGACGCA 72 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.....>>>.>.......<.<<<<<<<<<<. TCCTAACAATACAATTTTTCACATGTTCTTTAGTTTTTCtaaccaaaagaaaagaaaaaaccgaacaagagaaaaaatgtcaaaaaaatcGTAATGAAAA ATTTAGAATAGatttctttatattatattaagttagaattttctatttataattgTTCCTGAAGTCGAAAACGTTCCATTTGGTCCTGAATAGTGTCTTT - 46017_PtRNAdb chr-9.trna91-Met-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 91 39558912 39558839 Met CAT 0 0 48.6 35.10 13.50 Inf Thr 49.7 IPD:-39.60 Phanerogamae -NA- Dicot GCATCCATGGCTGAATGGTtAAAGCGCCCAACTCATAATTGGtGAATTCCTAGGTTCAATTCCTACTAGATGCA 74 >>>>>.>..>>>..........<<<.>>>>>.......<<<<.<......>>>>.......<<<<.<.<<<<<. ATGTCCTTTCATTGATTCCTCCTAAATTGCATTGATTTATCCTAAAGATTTCACTTCAATTGGAATTTGGTTATTCACCATGTACGAGGATCCCCGCTAA CGCCAATGGGACCCTCCAATAAATGTATTGGAAtggtgaattaaatttttaactgaTATGCAATTatcatttatacattttttttattttgatattctac - 46018_PtRNAdb chr-9.trna93-iMet-CAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 93 32065225 32065154 iMet CAT 0 0 58.3 28.10 30.20 Inf iMet 118.7 Phanerogamae -NA- Dicot ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGtCCCAGGATCGAAACCTGGCTCTGATA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CAATTTAAAGTTTGATTAATGGGGCCTCTGATGCAATTAATCCTTATTTCTAacttctttttataaatatattttttaatatacaaaACTTAAACAACAA ttctttcattttgttGGAATTTTCTTGTGAAATaccttctttttgtttttttaagtttctGTGAACTTTCTTGTGAAATACCATTCATGCATGTACGAGG - 46019_PtRNAdb chr-9.trna94-Arg-CCT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 94 31222302 31222230 Arg CCT 0 0 61.3 40.70 20.60 Inf Thr 72.7 IPD:-2.50 Phanerogamae -NA- Dicot GCGCCTGTAGCTCAGTGGAtAGAGCGTCTGTTTCCTAAGCAGAAAGtCATAGGTTTGACCCCTATCTGGCGCG 73 >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. TCTTCGTCATATATCAAAATCAATCTTACCGGTAACATGTAGGCTATAGTGAAAgtaaaaagtaattatttaaacatgtaaaagtAAGTTGTTAATAGAA TTTtgaatctttttcttttgtttgtaaAATGCACaatctttatttaattaaaaagaaacaatttaacatttttaacacTCCATCTCCCCAAACGagagat - 46020_PtRNAdb chr-9.trna95-Leu-TAA NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 95 30342386 30342316 Leu TAA 0 0 22.6 14.10 8.50 Inf His 9.4 IPD:-15.50 Phanerogamae -NA- Dicot GatttTAGTTGAGTGGTaaatTAAATAATTTACTAATGCAATTGGTGTGGGTTCAAATCCCATCAAATACA 71 >......>>>.............<<<.>>>.........<<<....>>>>>.......<<<<<......<. tgcttttattaataaaataataataaactatgATATATACAACTGATGGATACAATAGAGTgtccataataaaattaaaatgtataaaaatataaaataa tatttttttttattttttaaagtgaaaagattaaaatactcttgaataatattatttattcttattacGGAAGGACGTTCTCATAACTTCCTAATTGAGT - 46021_PtRNAdb chr-9.trna96-Pro-AGG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 96 29584678 29584607 Pro AGG 0 0 67.4 34.70 32.70 Inf Pro 112.3 Phanerogamae -NA- Dicot GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGAGTTCAATTCTCGGAATGCCCC 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CAAAGCTATGAATTAAACAGTAAAACTCAGTGCTTTGCTAccatatatcaaatcaaatattatagaataaaaattaaaagttactCACAGGATTCAACGA AAAACTTTgtgtttttttcatttctctcaAACTTTGGGCTTGTAGCAAAGTTTCTTTTATATTGATGAGCCCATTGGCTAAAGGATTCTACTTTTCAGTT - 46022_PtRNAdb chr-9.trna97-Arg-TCG NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 97 27495346 27495273 Arg TCG 0 0 82.3 61.00 21.30 Inf Arg 91.9 Phanerogamae -NA- Dicot GACCGCATAGCGCAGTGGAttAGCGCGTTTGACTTCGGATCAAAAGGtCGTGGGTTCGACTCCCACTGTGGTCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACAaaaaagtgttaaatttaaaacaaaaaatagtcgAGTTATTGGgaaattttcaactttaaagATTGGTATTCCTTTTATGTTCACCATATTACAATCT AGTGTTTTTGTCTGATCTTCTTTTGCCCTTCGAGGAtacttttgtctttttgtttatgtgtgtgtgtgtgtttttttttttatttttataattacataat - 46023_PtRNAdb chr-9.trna98-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 98 27384468 27384395 Ile AAT 0 0 73.6 54.20 19.40 Inf Ile 95.1 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCACAGGTTCGAAACCTGCATGGGCCA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<. TGTCACAGAATTGTTTCCTTTAGTAAAACAAATCCAGCAGGGAACTTTTTAGTAAACAAATACTAggctatatataaaaaactttaCAAGGGTACACAAC TTAATggtattttttctttattttttgttttttggaaaACGGAAACCTGTTATagtatttattaaaacaaaatttaagcgGGAGTATCAACGGCCTATTA - 46024_PtRNAdb chr-9.trna99-Ile-AAT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 99 27384303 27384226 Ile AAT 0 0 70.2 47.30 22.90 Inf Ile 84.1 Phanerogamae -NA- Dicot GGCCTATTAGCTCAGCTGGTtAGAGCGTCGTGCTAATAACGCGAAGGtCGCAGGTcggtTCGAGACCTGCATGGGCCA 78 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>...........<<<<<<<<<<<<. CATGGGCCATTAATggtattttttctttattttttgttttttggaaaACGGAAACCTGTTATagtatttattaaaacaaaatttaagcgGGAGTATCAAC tttaatggcttttttttctttattttttgttttttggaaaACGGCAACCTGTTACAGTAtttatttcaacaaaatttaagCAGCAGTATCGACGGCCTAT - 46025_PtRNAdb chr-9.trna9-Asn-GTT NUCLEAR Gossypium_raimondii GCA_000327365.1 chr-9 9 5769492 5769565 Asn GTT 0 0 84.5 59.40 25.10 Inf Asn 95.9 Phanerogamae -NA- Dicot GCTGGAATAGCTCAGTTGGTtAGAGCGTGTGGCTGTTAACCACAAGGtCGGAGGTTCAAGCCCTCCTTCTAGCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gtttttttaacgaAAGCCATCTCGAAATTGGAGGCAAGGAGAAGCCtctttaagaatttttatataccatataaaaattattttctaaaaggaTAAGCAT GTTTTTCTCTAGCTCTAAGCCTTTTTTACCTTGGGTCTTCATtgtgttattttcatttttaattttatatttcggCCATCACGCTCCTTACTTTTCCCAG + 113358_PtRNAdb Mt.trna10-Tyr-GTA MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 10 223397 223479 Tyr GTA 0 0 69.3 54.80 14.50 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGAGAGTGGCCGAGTGGTcaAAAGCGACAGACTGTAAATCTGTTGAAGTTTTTCTaCGTAGGTTCGAATCCTGCCTCTCCCA 83 >>>>>>>..>>.............<<.>>>>>.......<<<<<.>>>....<<<...>>>>>.......<<<<<<<<<<<<. ATGTTTTAATTCCCTTCAATCAAATCAATAAGCTTTTTGATTGATTCAGGGCGCCGCCCTCCTTCTTAGAACCCATTGAGGGGGGCCTCGGCCCGGGAAG CTTGTTTGTTGTTAGACTTCAGAGAAGAGAAAGGAGGCATTCGTCAGCGTAGGAAGGCCCACCGAGCGAAGCTCTTTCTTTCTTTTTTGGGGTGTGCCGT + 113359_PtRNAdb Mt.trna11-Ser-GGA MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 11 371428 371514 Ser GGA 0 0 73.6 47.00 26.60 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGAGAGATGGCCGAGTGGTtcAAGGCGTAGCATTGGAACTGCTATGTAGGCTTTTGTTTACCGAGGGTTCGAATCCCTCTCTTTCCG 87 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<. GTTTTATATTTCTAATGGATTGGGCCGTACCTTTACTGCAAGAATATGAATGACTCGCTATTCACTCGCGGTTTTTGGGTCATAATCATAAGATTATATA TACCCCTATCTTAACCTAATTCACCAACGTTACCGACCTCAATGTAAAAAATAACAATGGAAAGGTCAATTTTCAATTTCCGATCTTTCTATTTGACCCA + 113360_PtRNAdb Mt.trna13-Ala-TGC MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 13 379103 379207 Ala TGC 379140 379179 16.3 25.30 -9.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAAGGCGGTAAtGATAGTATcTTGTACCTG 65 >>>.>>>..>>>>........<<<<.>>>>>...............................................<<<<<.....>.......<<<<.<<<. ACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTGCGCCAAGGAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCATGCTCCACTTGGCTCG AACCGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAGGACCGAAACATGCCACTGAAAGACTCTACTGAGACAAAGATGGGCTGTCAAGAACGTAGAAGA + 113361_PtRNAdb Mt.trna14-Trp-CCA MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 14 384098 384171 Trp CCA 0 0 71.9 42.90 29.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCGCTCTTAGTTCAGTTcGGTAGAACGCGGGTCTCCAAAACCCGATGtCGTAGGTTCAAATCCTACAGAGCGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TGCCAAGGGCTTCTTTATTATATAATTATCTTATGCATGCAAGATGTATTGGGGTCACATAAAATTTATTATTATTATGTTTTTATTATGAAAATAAAAA ATTCCATTCTTGTTAGATCGAGAATGACAATGAAATAATTGAACAGCAGTCTAAAGTCTGAATTTGACCTCCAGTTTGTTTTTTAGGGTTAATACAAAGA + 113362_PtRNAdb Mt.trna15-Asp-GTC MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 15 551481 551554 Asp GTC 0 0 65.8 48.30 17.50 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGATTGTAGTTCAATCGGTcAGAGCACCGCCCTGTCAAGGCGGAAGcTGCGGGTTCGAGCCCCGTCAGTCCCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CGTGTCTCTGTTACAACACGGCGAAACTAAATGGTTCGAATGAAATCCAATAAAATAAGAAAAATAATAAGAATTTTGAGGCTGTACACCTAATTTTCCT ACCTAGGATCCGATGAATCGATCAATTCATCTCTTCATTTTCTGTAAAAAGAAAAGAAGAGACAAAGAGTAGGATCTAATTCCCAGCCTTCTTTCGTTTC + 113363_PtRNAdb Mt.trna16-Ile-TAT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 16 566851 566936 Ile TAT 566888 566899 41.2 37.60 3.60 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCATCCATGGCTGAATGGTtAAAGCGCCCAACCTATAAGAGGCAAATTCGTAGGTTCGATTCCTGCTGGATGCA 74 >>>>>>>..>>>..........<<<..>>.......................<<.......>>>>>.......<<<<<<<<<<<<. ACACGTCTTCCTATTCCATCTTTTCTCGAATCCCCTTTAACGGAAGAAATAGAAGCTCGAGAAGGAATACCAAAACCTAGTTCACTCGCTGAGTCTTTTT CTTGGAACGTTTAGTTCAATTGCTGCTCACGAAATTGTTACATATAGCTCGCCCTTATAGCTTATGGGGCACTTCACTCGCTCAACACTCGTTCTTCACT + 113364_PtRNAdb Mt.trna17-Gly-GCC MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 17 582189 582260 Gly GCC 0 0 63.4 48.20 15.20 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCGGAAATAGCTTAATGGTAGAGCATAGCCTTGCCAAGGCTGAGGtTGAGGGTTCAAGTCCCTCCTTCCGCT 72 >>>>>>...>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<<<. TCGATCGGGGGTCAAGAGTGCGGTCCGGCGGAAAAACAGAAGTCGTCCGTATCAAGTAATACGTGAATTGCTCAGTAGTGCTTCGCCACTACCGTAGCTG CCTGGCTTCGTCGTTTAGTGGTAACGAGTGGAGTGCATAAGCCCCTTTAGAGAGAGGGGCGAGCAGCAAGCAGACCCTTGTATAGGGTTCCAAACCTATC + 113365_PtRNAdb Mt.trna18-Gln-TTG MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 18 584454 584525 Gln TTG 0 0 64.9 39.90 25.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot TGGAGTATAGCCAAGTGGTAAGGCATCGGTTTTTGGTACCGGCATgCAAAGGTTCGAATCCTTTTACTCCAG 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACTTGCTATATCCCCGCGTTCTTGCACGGCTCGGCTCGTTCTTCGAGCCCTGCTTCTCCCTTCCCCCTCTCCCCGTTCTTACCGTCCAAAACAGGCCGTA ATTATGAACACCCGATCGGATCTGTCAAGAACGAGCTGACGACTACAGGGGAAGCGGCTGACTGCAGTCCCTGAGCCCAGCTTGTAGCAAGCCAAAAGTT + 113366_PtRNAdb Mt.trna19-Met-CAT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 19 576576 576504 Met CAT 0 0 64.6 33.80 30.80 Inf n/a n/a n/a Phanerogamae -NA- Dicot ACCTACTTGACTCAGCGGTtAGAGTATCGCTTTCATACGGCGAGAGtCATTGGTTCAAATCCAATAGTAGGTA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TCTCTTTCTTAGCGCTCCGCCCCCCTTGTATAGTAAGTGGGACTCTGGTTGCGCGGCTTTTTCTTATAGGGGTCTATCTTCTCTGACTTGACTCAGCTTG AAACCGGCCGAAACCCCTGCTTTTGCCAGCATGACAGCAAGCACGCGACTGGCAGCAAGGAGTCAACTGAATGACCAAAGCATTGGTTGCTTCCACTTGT - 113367_PtRNAdb Mt.trna1-Met-CAT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 1 10831 10907 Met CAT 0 0 58.4 34.70 23.70 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGCTTATAGTTTAATTGGTtGAAACGTACCGCTCATAACGGTTATAtTGTAGGTTCGAGCCCTACTAAGCCTACCA 77 >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<.... TAATTGTTCATTCCTGGGAAGAGGAAGAAGCAGATAGAGCAAAGGCCCCCTTTCCGTCCGCTCTTCCCGAAGTGAGCAAATTGCATGTAGAGATCCGTAG CCCCTTCTCTTCACCCGATATAAGGCAGGCGAAGTCCCCGCCACCCTGCAGATCTCAATCTAGCGACGGCACCTGGAACCACACTGCTGCCGCTGCCCTT + 113368_PtRNAdb Mt.trna20-Sup-TTA MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 20 551283 551195 Sup TTA 551248 551235 27.5 18.20 9.30 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCCCTTTAACTAAGCGGTAGAGTCGCGCTCTTTAAAGGCGTAAGtCGTCGGTTCAAATCCGATAAaaaaAGGGCT 75 >>>>>>..>>>.........<<<.>>>>>.....................<<<<<.....>>>>>.......<<<<<<<.....<<<<. ACGAATGATATACTTACTATATTATTATAAGAAAATAGATCTTTATAAATATAAATGCAGTAAACTCATAGTGGGCTAATTCATGAATTGAATCAAATGG TTTCTATTTTTTACGAAACTCCTGTCTTAGTCTTCATTTTCTTTTTCAGCAGAGAATATAGATATGAAAAAAAGGTAACCGCCTGGTGAGTAGTTTTTTT - 113369_PtRNAdb Mt.trna21-Met-CAT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 21 478750 478678 Met CAT 0 0 52.4 33.40 19.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot ACCTACTTGACTCAGCGGTtAGAGTATCGCTTTCATACGGCAAGAGtCATTGGTTCAAATCCAATAGTAGGTA 73 >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<. GGGTGCTTATCCCTTACTTCTGCTTCCTCGGCATTCAGTGAAAGGCTTTTTCTTTTTCTTATCTTATAGGGGTCTATTTTCTCTGACTTAACTCAGCTTG GAAGCGGTCGAAACCCCTGCTCTAGCTACTTCCCATCTCTACGAATTCGGGCGGGCGAAGGGTCAACTCTACTTATACTTAGCGAACTGGTCTCAATGCA - 113370_PtRNAdb Mt.trna22-Gln-TTG MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 22 454654 454575 Gln TTG 454616 454610 32.6 25.30 7.30 Inf n/a n/a n/a Phanerogamae -NA- Dicot AGGGATGTGGCGCAGCTtGGTAGCGTCTTATGTTTTGGACAAAATGTCACGGGTTCCAATCTTGTCATCCCTA 73 >>>>>>>..>>>>.........<<<<.>>.>>..............<<.<<....>>>>>.......<<<<<<<<<<<<. AAAGAAGAAATGGCAAGATAAATTGGATATCGATGGAGGAAATAACGATGTGGAAAACATGGGCAGAGATTCTCTACAATGACACCGTAGACCAATTGAA CCTTCTCCTCTGGGCAGTAACGAAGGTTAAGATCGATTCAAGACATGACAAATTTTGAATTTAATGATACTAGATGCATGCAAGATGTAGTGAAGGTACA - 113371_PtRNAdb Mt.trna23-Trp-CCA MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 23 454430 454357 Trp CCA 0 0 68.7 42.90 25.80 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCGCTCTTAGTTCAGTTcGGTAGAACGTGGGTCTCCAAAACCCGATGtCGTAGGTTCAAATCCTACAGAGCGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATGACAAATTTTGAATTTAATGATACTAGATGCATGCAAGATGTAGTGAAGGTACAAAAATCATCCTTTTCTTTACAATTGTATCTACTGTGATAAGAAA ATTACGAATCAACAGACCCCATTACCGAGATATGGGAACTCAAATAAATAAAATAAAAAAATTGTATCGAATCCATTTTCTATTTTGGAACGAACAACAA - 113372_PtRNAdb Mt.trna24-Val-GAC MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 24 445199 445128 Val GAC 0 0 36.5 25.10 11.40 Inf n/a n/a n/a Phanerogamae -NA- Dicot AGGGATATAACTTTGCGGTAGAGTGTCACCTTGACGCGGAGGTGGtCATCAGTTCGAGTCAGATTATCCCTA 72 >>>>>>>..>>>>.......<<<<.>>.>>.......<<.<<.....>>>.>.......<.<<<<<<<<<<. TATCTATATGATCCGGCCAATTGCGTAAAGCCCGCGCTAGCAACGGAACCGGGGAAAGTATACAGAAAAGACAGTTCTATTTCTTGATGGGGGGCAGGGA AACCCAATGTGAGTTTTTCTTTTGCCTTGCACCCCCTCCGTGAATGGGAACCCTCAAGCCCACTTTCCCACCCCCGCCCCGTAGAGGGAAATTTACCTGT - 113373_PtRNAdb Mt.trna25-Asp-GTC MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 25 434364 434291 Asp GTC 0 0 53.7 39.50 14.20 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGATTGTTGTTCAATTTGTcAGAGAACCGCCCTGTCAAGGCGGAAGtTGCGGGTTCAAGTCCCGTCAGTCCCG 74 >>>>>>>...>>>.........<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTCCTTTCCATGCTGCTCCTTGTTCTAGCTCATCTTTATTCTTTTCCAACGGCTTCAAATGAAGTAGGTGAGGAGAAAAGAATTTGAAGGTTGTAGACCA ACCTATGATCCGAGAAAGATATATCAATTCATCTCTCCGGGGAGAGAAAGAGTTGGATCTAATTTCCCAGCCTTCTTTCGTTTCGCATTTCTCATCGGAC - 113374_PtRNAdb Mt.trna26-Ser-GCT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 26 339577 339490 Ser GCT 0 0 64.7 44.10 20.60 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGAGGGATGGCTGAGTGGCttAAGGCATTGGTTTGCTAAATCGACATACAAGAAAATTGTATCATGGGTTCGAATCCCATTTCCTCCG 88 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>.....<<<<<<.>>>>>.......<<<<<<<<<<<<. AGAGTCTCGCTCATAGAGGAAGAGTTCGCGCGCTAGCGCGCTACGGCTTACGCGGATCAGATAGCCCTTCGGGCGCGCATCAAATTTCGATCAACAACTT GCACGGAAGTCTAACGGGCAGGCGAAATTACGTGAAAGAAAGAACCTCTTGGTGGAGTCCCCCGGAGGACAGAATAGCACTACTTAGTGAGACGGAGCGG - 113375_PtRNAdb Mt.trna27-Phe-GAA MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 27 339142 339069 Phe GAA 0 0 61.0 47.10 13.90 Inf n/a n/a n/a Phanerogamae -NA- Dicot GTTCAGGTAGCTCAGCTGGTtAGAGCAAAGGACTGAAAATCCTTGTGtCAGTGGTTCGAATCCACTTCTAAGCG 74 >>>.>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<. GCGAAAAAAGCCCTAACATATTAGTAAGGGGCTTTTCCCTTACTAGTAAAGTGGTAAGGTAGGGCGCTATTCGATGAAGAAAACTTACTTTAGGAAAGTG GGCGAAGGGTCCAAAGGACACGTAGCCGAGAGCGAGCCGGATTTTTAAATTCAAGTGAAAGAAGAAGGCAAAAAGCCGTATAGTGCGGGAGGCAGATTAA - 113376_PtRNAdb Mt.trna28-Pro-TGG MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 28 338849 338774 Pro TGG 0 0 55.5 37.90 17.60 Inf n/a n/a n/a Phanerogamae -NA- Dicot CGAGGTaGTAGCGCAGTCtGGTcAGCGCATCTGTTTTGGGTACAGAGGGcCATAGGTTCGAATCCTGTCACCTTGA 76 >>>>>>.>..>>>>..........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTACTCGGATTGGTTCTCGCCCCCCTGTGCCCAAAAGGATGGGCGAGTTCGGTTCGAGTGTTCATCGATCGGGCGGATCTATATGCTTCGGGGGGTGAGA TGTGATGGGCTGAAATGCACAGCCCCGCAGCCTCGTTAGGCTCGCGAAAAAGACTTTTTCAACGAAGGCACAGATTTCATTGAAAAGGTACGGTGACGTA - 113377_PtRNAdb Mt.trna29-His-GTG MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 29 189873 189800 His GTG 0 0 58.5 40.50 18.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCGGATGTAGCCAAGTGGAtcAAGGCAGTGGATTGTGAATCCACCACgCGCGGGTTCAATCCCCGTCGTTCGCC 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CAACTATAGTATAGGAAAAAGCTTCTCTTTGATAGCGGTCATAGGGGGTTCAGAAAGGATCTGATCGTAGATAGAGACTTAAACCTGTGTGGGGGTAGGG CATCAATAAATGGACCATTTGTTACGGAGACACAAGACAACCCTAGAAAGCATTTTTTCTGCAAGTAATCTCGAGGCTTTCAAACGCATCCAAGCAATTG - 113378_PtRNAdb Mt.trna2-Asp-GTC MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 2 100270 100343 Asp GTC 0 0 65.8 48.30 17.50 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGATTGTAGTTCAATCGGTcAGAGCACCGCCCTGTCAAGGCGGAAGcTGCGGGTTCGAGCCCCGTCAGTCCCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CGTGTCTCTGTTACAACACGGCGAAACTAAATGGTTCGAATGAAATCCAATAAAATAAGAAAAATAATAAGAATTTTGAGGCTGTACACCTAATTTTCCT ACCTAGGATCCGATGAATCGATCAATTCATCTCTTCATTTTCTGTAAAAAGAAAAGAAGAGACAAAGAGTAGGATCTAATTCCCAGCCTTCTTTCGTTTC + 113379_PtRNAdb Mt.trna30-Sup-TTA MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 30 100072 99984 Sup TTA 100037 100024 27.5 18.20 9.30 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCCCTTTAACTAAGCGGTAGAGTCGCGCTCTTTAAAGGCGTAAGtCGTCGGTTCAAATCCGATAAaaaaAGGGCT 75 >>>>>>..>>>.........<<<.>>>>>.....................<<<<<.....>>>>>.......<<<<<<<.....<<<<. ACGAATGATATACTTACTATATTATTATAAGAAAATAGATCTTTATAAATATAAATGCAGTAAACTCATAGTGGGCTAATTCATGAATTGAATCAAATGG TTTCTATTTTTTACGAAACTCCTGTCTTAGTCTTCATTTTCTTTTTCAGCAGAGAATATAGATATGAAAAAAAGGTAACCGCCTGGTGAGTAGTTTTTTT - 113380_PtRNAdb Mt.trna31-Met-CAT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 31 24601 24529 Met CAT 0 0 58.4 43.00 15.40 Inf n/a n/a n/a Phanerogamae -NA- Dicot AGCGGGGTAGAGTAATGGTtAACTCGTCAGGCTCATAATCTGTAGAaTGCAGGTTCGAATCCTGCCCCCGCCT 73 .>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<.. CTATACAAGGCCGCCGCTTACTAAGCGCTGGTTCTATCCCGGCCAAGCAACCAAAGCCGGGAACCTAGGTGGGAATAGTGAAAGAAAGAGAAGGGGAAGA AATTACGTCAGATACTTGATAGAGTCCTGCTCGTGAATCGGGGTTCTCAATAGAGGAGAGCAAGACGATAGATGGAAAGAAGACCATTGGATAACAATAA - 113381_PtRNAdb Mt.trna3-Lys-TTT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 3 156358 156430 Lys TTT 0 0 75.0 59.70 15.30 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGTGTATAGCTCAGTTGGTAGAGCATTGGGCTTTTAACCTAATGGtCGCAGGTTCAAGTCCTGCTATACCCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAAGGCCGGCTTTAGAGCCCAAGCCCCTTTAATATGATGAGAAGAAGTAGGGGCCGCCCTCTTTTCCGCACCAATCCTTATTTACTACTACATCTTTTTT AACCTACCTTACGCTATACTATTAGTAAGGATGCGTAGTAGCGTTCAAAGATCACTCTTTGGCCTTTAGACTCGCTTCAGCGACTTCGCCCTTTAAGTGA + 113382_PtRNAdb Mt.trna4-Ser-TGA MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 4 157266 157352 Ser TGA 0 0 73.8 45.70 28.10 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGATGGATGTCTGAGCGGTtgAAAGAGTCGGTCTTGAAAACCGAAGTATTGATAGGAATACCGGGGGTTCGAATCCCTCTCCATCCG 87 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>......<<<<<.>>>>>.......<<<<<<<<<<<<. CAATAGAGTCCGCCGATAGGCGCAAGCAAGCGTAGCGAATCACATAGATAAGCCCCTACCTGCCAGCGCGCGGATAGATAGGGCGGGCGAAGCGCGAAGG CGAAGTCATAAGTTCTCTCTTGCGTTATCTATAGATAAGAACGAATCGGATCGACTCGACTGATATGATAGATGGAATGGGTAGCTTGTGTTATGATGTA + 113383_PtRNAdb Mt.trna5-Met-CAT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 5 168121 168190 Met CAT 0 0 18.2 0.00 18.20 Inf n/a n/a n/a Phanerogamae -NA- Dicot GTCACGATCTGAAAGGTtGAAATCTGGGTCATGcaTCTGGAAAGCGCTGGTTCAAATCCGGCTCGTGACA 70 >>>>>>>..>..........<.>>>>>.........<<<<<....>>>>>.......<<<<<<<<<<<<. AGTGGTAGCGGATGATAGCTTAATGGACAGGGGTTGGGGTGAAAAGAAAGAAGGAGCACCCCCCCGGACGTACTCCCATGTGAGGAACCGGGTAACCAAA AGACGAAACTTCCTTACAGCAATAAAGAACATAACAAATGCCTCACTTCCGTCGTCCGCCTTTATCATTAGACCACTATCTATATATGTATTTTCATCCT + 113384_PtRNAdb Mt.trna6-Met-CAT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 6 181741 181813 Met CAT 0 0 58.4 43.00 15.40 Inf n/a n/a n/a Phanerogamae -NA- Dicot AGCGGGGTAGAGTAATGGTtAACTCGTCAGGCTCATAATCTGTAGAaTGCAGGTTCGAATCCTGCCCCCGCCT 73 .>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<.. CTATACAAGGCCGCCGCTTACTAAGCGCTGGTTCTATCCCGGCCAAGCAACCAAAGCCGGGAACCTAGGTGGGAATAGTGAAAGAAAGAGAAGGGGAAGA AATTACGTCAGATACTTGATAGAGTCCTGCTCGTGAATCGGGGTTCTCAATAGAGGAGAGCAAGACGATAGATGGAAAGAAGACCATTGGATAACAATAA + 113385_PtRNAdb Mt.trna7-Glu-TTC MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 7 191884 191955 Glu TTC 0 0 60.8 35.80 25.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot GTCCCTTTCGTCCAGTGGTtAGGACATCGTCTTTTCATGTCGAAGACACGGGTTCGATTCCCGTAAGGGATA 72 >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<....>>>>>.......<<<<<<<<<<<<. AATCGCCAACATGAACACAAACGAAATCTTGAATTGCGTATAGAAACAAAACGAACCACTTCTATTGTCGGAGCTGAGGTATATGAAGAATGGCTTTTTG GGTACTCATTCCCGGCCGCTTTCAGTTAGTGTTCATTGCTGAGTGATCGCTCGCTATCTGGCTGGAAAAGGTGGTCCGGAAGCTTCCTTTCTCCCAGCAA + 113386_PtRNAdb Mt.trna8-Cys-GCA MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 8 220222 220292 Cys GCA 0 0 49.0 34.00 15.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGCTAGGTAACATAATGGAAATGTATCGGACTGCAAATCCTGGAATGACGGTTCGACCCCGTCCTTGGCCT 71 >>>>>>>..>>>>.......<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<<<<<<<<. GTCCCCTCTTCTCTGGTACCCCGCCACCGCATATGTAGAAAAAGAGGGAGCGGGGAAGGAAGAACAACCGTTTGACTTTGGCACATGAGGTGGCGGGTTT CGGGGAGTGGCGAGCTGCACGGAATTTGAATTAATCAAATGGCATAGCATAAGGGGGCTTTCCTTTGTTATAAATCCACAGACAACATACTGGAACTTCC + 113387_PtRNAdb Mt.trna9-Asn-GTT MITOCHONDRIAL Gossypium_raimondii NC_029998.1 Mt 9 222430 222501 Asn GTT 0 0 68.2 44.70 23.50 Inf n/a n/a n/a Phanerogamae -NA- Dicot TCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGtCGTAGGTTCAAATCCTACTTGGGGAG 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ACCTTTTCCCCCGGTGTATGTGAAAAAGAGTGACGAACCCATTTTTTTTCGGTCATAGGTTGGTCCAAAGAATGAGAGTCGGCTTCCTTAAGTCCGTTGT AATTTATAGTTATCGCTTTTCTGACCTAGCGACCCCTGCCCTTCTCCTTTGTTTCTAAACTAGCAGAATCGTGGGACATCAAAAGTGGGAAGTTGATTGT + 111150_PtRNAdb chl.trna10-Ala-TGC PLASTID Gossypium_raimondii NC_016668.1 chl 10 108451 108555 Ala TGC 108488 108527 16.3 25.30 -9.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAAGGCGGTAAtGATAGTATcTTGTACCTG 65 >>>.>>>..>>>>........<<<<.>>>>>...............................................<<<<<.....>.......<<<<.<<<. ACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTGCGCCAAGGAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCATGCTCCACTTGGCTCG AACCGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAGGACCGAAACATGCCACTGAAAGACTCTACTGAGACAAAGATGGGCTGTCAAGAACGTAGAAGA + 111151_PtRNAdb chl.trna11-Arg-ACG PLASTID Gossypium_raimondii NC_016668.1 chl 11 113139 113212 Arg ACG 0 0 57.7 41.30 16.40 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGCCTGTAGCTCAGAGGAttAGAGCACGTGGCTACGAACCACGGTGtCGGGGGTTCGAATCCCTCCTCGCCCA 74 >>>>..>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<..<<<<. AAAGGCACTTTCACATCTTCTTAACCCGAAATGGCTGGGGAGAGGAAAGGTTCCTTTTTTTTAGGGTACTCCTGGGAACAGATCCAGTGGAGACGAGGTG CAACCGGCCCAAAAGGGAAGGACCTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTGGGCGTGGGTCTTTTGC + 111152_PtRNAdb chl.trna12-Asn-GTT PLASTID Gossypium_raimondii NC_016668.1 chl 12 134906 134977 Asn GTT 0 0 68.7 42.80 25.90 Inf n/a n/a n/a Phanerogamae -NA- Dicot TCCTCAGTAGCTCAGCGGTAGAGCGGTCGGCTGTTAACTGACTGGtCGTAGGTTCGAATCCTACTTGAGGAG 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTACGAAGAAGTTCCGGGGGTTACGAAGGAAACTTCGAGTTCATATTGGTCATGGGTTGAGAACGGGAATTGAACTCTATGAGATCTAATCTCCCGTTGT ATTTGATTCATTCCGAATTAAAGAATTCAGAATGTCAGAATGAAAGGGTTCGCTTTGACCGTTAAGAGCAGGTAACCCGTTCCCTGTGTCTTTGTTTCTA + 111153_PtRNAdb chl.trna13-Leu-CAA PLASTID Gossypium_raimondii NC_016668.1 chl 13 149969 150049 Leu CAA 0 0 62.3 34.40 27.90 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCCTTGGTGGTGAAATGGTaGACACGCGAGACTCAAAATCTCGTGCTAAAGAGCGTGGAGGTTCGAGTCCTCTTCAAGGCA 81 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<. CCGATCAATAGAAATACTCCAACACTCCACCTTTGTCATATATTCCATACATCACACTAGATAGATATCATATTCATGGAATACGATTCACTTGCAAGAT TAATATTGAGAATGCTCATTGAATTGGAATAAGTTCGGCAGCGGATCACGAGATCTTGGTGATCTTCTCTATCTAATGAATGGGGAGTCCGCTTTGAAAT + 111154_PtRNAdb chl.trna14-Met-CAT PLASTID Gossypium_raimondii NC_016668.1 chl 14 157987 158060 Met CAT 0 0 70.4 43.60 26.80 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCATCCATGGCTGAATGGTtAAAGCGCCCAACTCATAATTGGcGAATtCGTAGGTTCAATTCCTACTGGATGCA 74 >>>>>>>..>>>..........<<<.>>>>>.......<<<<.<.....>>>>>.......<<<<<<<<<<<<. ATGTCCTTTCATTGATTCCTCCTAAATTGCATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTACGAGGATCCCCGCTAA CGCCAATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCAATGGAATCTCATCATCTATACATAACGAATTGGTGTGGTATATTCATATCATA + 111155_PtRNAdb chl.trna15-Val-GAC PLASTID Gossypium_raimondii NC_016668.1 chl 15 143540 143469 Val GAC 0 0 58.9 28.60 30.30 Inf n/a n/a n/a Phanerogamae -NA- Dicot AGGGATATAACTCAGCGGTAGAGTGTCACCTTGACGTGGTGGAAGtCATCAGTTCGAGCCTGATTATCCCTA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAAAGCCTGGCTCCAAGTTGTTCAAGAATAGTGGCGTTGTTGAGTTTCTCGATCCTTTGACTTAGGATTAGTCAGTTCTATTTCTTGATGGGGGCAGGGA AACCCAATGTGAGTTTTTCTATTTTGCCTTGCCCCCCGCCGTGATCGAATAAGAATGGATAAGAGGCTCGTGGGATTGACGTGAGGGGGTAGGGATGGCT - 111156_PtRNAdb chl.trna16-Ile-GAT PLASTID Gossypium_raimondii NC_016668.1 chl 16 141458 141371 Ile GAT 141422 141407 16.4 0.00 16.40 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATATGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCA 72 >>>>>>>..>>>>.......<<<<..>>>>.......................<<<<...>>>>><<<<<..>>>..<<<<<<<<<<. TCCCTCCCATGTGGCGACATGGGGGCGTAAAAAGGAAAGAGAGGGATGGGGTTTCTCTCGCTTTTGGCATAGCGGGCCCCCAGCGGGAGGCCCGCACGAC ATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTC - 111157_PtRNAdb chl.trna17-Ala-TGC PLASTID Gossypium_raimondii NC_016668.1 chl 17 140365 140261 Ala TGC 140328 140289 16.3 25.30 -9.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAAGGCGGTAAtGATAGTATcTTGTACCTG 65 >>>.>>>..>>>>........<<<<.>>>>>...............................................<<<<<.....>.......<<<<.<<<. ACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTGCGCCAAGGAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCATGCTCCACTTGGCTCG AACCGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAGGACCGAAACATGCCACTGAAAGACTCTACTGAGACAAAGATGGGCTGTCAAGAACGTAGAAGA - 111158_PtRNAdb chl.trna18-Arg-ACG PLASTID Gossypium_raimondii NC_016668.1 chl 18 135677 135604 Arg ACG 0 0 57.7 41.30 16.40 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGCCTGTAGCTCAGAGGAttAGAGCACGTGGCTACGAACCACGGTGtCGGGGGTTCGAATCCCTCCTCGCCCA 74 >>>>..>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<..<<<<. AAAGGCACTTTCACATCTTCTTAACCCGAAATGGCTGGGGAGAGGAAAGGTTCCTTTTTTTTAGGGTACTCCTGGGAACAGATCCAGTGGAGACGAGGTG CAACCGGCCCAAAAGGGAAGGACCTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTGGGCGTGGGTCTTTTGC - 111159_PtRNAdb chl.trna19-Leu-TAG PLASTID Gossypium_raimondii NC_016668.1 chl 19 129677 129598 Leu TAG 0 0 57.3 28.70 28.60 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCCGCTATGGTGAAATCGGTaGACACGCTGCTCTTAGGAAGCAGTGCTAGAGCATCTCGGTTCGAGTCCGAGTGGCGGCA 80 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>..<<<..>>>>>.......<<<<<<<<<<<<. TAAATGCTTCCTAACAAATTTGACATTTTACATTGAATTGACCCCTTCACCTTCAATCTCGACGATTGACTAAAAAATGGGTTATTATGATTTCGAGCAA TAGTATCTTCTAAAAGAGATAGAATAAGTCCTATAATGAAAATGAATTTCATTCCTGATTTCCATTCCATAAAATCGAGAAACCCAGGCTTTTTTCATAA - 111160_PtRNAdb chl.trna1-Arg-TCT PLASTID Gossypium_raimondii NC_016668.1 chl 1 10131 10202 Arg TCT 0 0 67.2 38.60 28.60 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCGTCCATTGTCTAATGGAtAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATCCTATTGGACGCA 72 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AATACAATTTTTCACATGTTCTTTAGTTTTTCCAACCAAGAGAAAAGAAAAAACCGAACAAGAGAAAAAAAGTCAAAATGTCAAAAAATCGTAATGAAAA ATTTAGAATCGATTTCTCTATATTCCATTAAGTTAGAATTTTCTATTTATAATTGTTCCTGAAGTCGAAAACGTTCCATTTGGTCCTGAATAGCGTCTTT + 111161_PtRNAdb chl.trna20-Asn-GTT PLASTID Gossypium_raimondii NC_016668.1 chl 20 113910 113839 Asn GTT 0 0 68.7 42.80 25.90 Inf n/a n/a n/a Phanerogamae -NA- Dicot TCCTCAGTAGCTCAGCGGTAGAGCGGTCGGCTGTTAACTGACTGGtCGTAGGTTCGAATCCTACTTGAGGAG 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTACGAAGAAGTTCCGGGGGTTACGAAGGAAACTTCGAGTTCATATTGGTCATGGGTTGAGAACGGGAATTGAACTCTATGAGATCTAATCTCCCGTTGT ATTTGATTCATTCCGAATTAAAGAATTCAGAATGTCAGAATGAAAGGGTTCGCTTTGACCGTTAAGAGCAGGTAACCCGTTCCCTGTGTCTTTGTTTCTA - 111162_PtRNAdb chl.trna21-Leu-CAA PLASTID Gossypium_raimondii NC_016668.1 chl 21 98847 98767 Leu CAA 0 0 62.3 34.40 27.90 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCCTTGGTGGTGAAATGGTaGACACGCGAGACTCAAAATCTCGTGCTAAAGAGCGTGGAGGTTCGAGTCCTCTTCAAGGCA 81 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<. CCGATCAATAGAAATACTCCAACACTCCACCTTTGTCATATATTCCATACATCACACTAGATAGATATCATATTCATGGAATACGATTCACTTGCAAGAT TAATATTGAGAATGCTCATTGAATTGGAATAAGTTCGGCAGCGGATCACGAGATCTTGGTGATCTTCTCTATCTAATGAATGGGGAGTCCGCTTTGAAAT - 111163_PtRNAdb chl.trna22-Met-CAT PLASTID Gossypium_raimondii NC_016668.1 chl 22 90829 90756 Met CAT 0 0 70.4 43.60 26.80 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCATCCATGGCTGAATGGTtAAAGCGCCCAACTCATAATTGGcGAATtCGTAGGTTCAATTCCTACTGGATGCA 74 >>>>>>>..>>>..........<<<.>>>>>.......<<<<.<.....>>>>>.......<<<<<<<<<<<<. ATGTCCTTTCATTGATTCCTCCTAAATTGCATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTACGAGGATCCCCGCTAA CGCCAATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCAATGGAATCTCATCATCTATACATAACGAATTGGTGTGGTATATTCATATCATA - 111164_PtRNAdb chl.trna23-Pro-TGG PLASTID Gossypium_raimondii NC_016668.1 chl 23 70659 70586 Pro TGG 0 0 69.9 40.00 29.90 Inf n/a n/a n/a Phanerogamae -NA- Dicot AGGGATGTAGCGCAGCTtGGTAGCGCGTTTGTTTTGGGTACAAAATGtCACAGGTTCAAATCCTGTCATCCCTA 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. AAGAGGAAATGGAAAGATCCGTTTTGTATATCAATAGATGAAATAAGGGTGTGGAAAACAAGACAGGGATTCTCTACAATGACATTGTAGGCCAATTGAA CCTATTACTTCTCCTTTGAGCAGTAACGAGGGAGTCGTTTTAGATTGATTAAAATTAAGCATACATAATCTATCATTTTCTCATATTATATATGATATAT - 111165_PtRNAdb chl.trna24-Trp-CCA PLASTID Gossypium_raimondii NC_016668.1 chl 24 70402 70329 Trp CCA 0 0 71.9 42.80 29.10 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCGCTCTTAGTTCAGTTcGGTAGAACGTGGGTCTCCAAAACCCAATGtCGTAGGTTCAAATCCTACAGAGCGTG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TATTATATATGATATATGATAGTATAGTTGTGCGCGATGTATTGGGGTTATAAAATAAAAGAATCCTCTTTTTTACAGTCTTATTTATTATGATAAGAAA ATTCCGCTCTTGTTAGGTCGAAAATTACACCGAACTGAAAAAAAAAAAAAATTGAACAGCAATTCGAATTTGACCTCCTTGGATTAAATTATAAAATTCA - 111166_PtRNAdb chl.trna25-Thr-TGT PLASTID Gossypium_raimondii NC_016668.1 chl 25 48701 48629 Thr TGT 0 0 69.3 47.60 21.70 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCCCGCTTAGCTCAGAGGTtAGAGCATCGCATTTGTAATGCGATGGtCATCGGTTCGATTCCGATAGCCGGCT 73 >>>.>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<. TTAATAATTCATATTAATTATGAATAACTAATAGATAGTTAATAGATAAGATCCTAATAGTTTGCTGAATCCCTATGAATACCAAATTTCTATTATTTGA TTCCCTATTTGTTTGCTTTTTGCCTTTTTTACATAATTTAGAATGTTTTTTTTGAAATCAAAGAACAAACAGTGAAAAAGCTTTTTCCCCTTTTCTTTCC - 111167_PtRNAdb chl.trna26-Met-CAT PLASTID Gossypium_raimondii NC_016668.1 chl 26 38783 38710 Met CAT 0 0 66.9 39.90 27.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot CGCGGGATAGAGCAGTTtGGTAGCTCGCAAGGCTCATAACCTTGAGGtCATGGGTTCAAATCCCGTTCCCGCAA 74 .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.. CCCCTTTACCATTCTGTATAAATAGGCTATTCTATTTGTACATATATGGAAGAGGGGCGCATTCAATCTTTGTTTGTCCATTAGTTTGGTTTCTTTTCAT CATTCCATTTTTTTGACAAAAAAAATTAGACTTGACCCTATTAACTAGTCATTTTTTCTTTTAGGGGGGTGTATTATATTCCAATTCCAGTCAACTATTT - 111168_PtRNAdb chl.trna27-Ser-TGA PLASTID Gossypium_raimondii NC_016668.1 chl 27 37196 37104 Ser TGA 0 0 81.5 50.70 30.80 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGAGAGATGGCTGAGTGGTtgATAGCTCCGGTCTTGAAAACCGGTATAGTTCGAAacaAaGAACTATCGAGGGTTCGAATCCCTCTCTCTCCT 93 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.>>>>>>>........<<<<<<<.>>>>>.......<<<<<<<<<<<<. ATAGGTTCACACACGATATCTTTCTATACATAGTGATGGTATCAACTCATATGGCCATGTTCGATTCGGTGGAATAAAAATAAAATAGAAATTAGCTTTC TTTGCTCGATGAATAGATTTCTTTCTTTATTGCTTTTTCCTGGCTTCTTAATTAAGAATCTTAATATTAATAAAAGGGAATGGCTCGGCTGGGTGGAATA - 111169_PtRNAdb chl.trna28-Glu-TTC PLASTID Gossypium_raimondii NC_016668.1 chl 28 32093 32021 Glu TTC 0 0 55.8 27.50 28.30 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCCCCCATCGTCTAGCGGTtcAGGACACCTCTCTTTCAAGGAGGCAGCGGGGATTCGACTTCCCCTGGGGGTA 73 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. AAGATGGAAAAAGCTTTCGGCTCTAGTCATTCCATTATATTGACAATTTCAAAAAACTGCTCATACTATGAGCATAGTATGGTCGCGGTCAGGCAAGTAT GGGTACTACGAAAGGAAGTTGATCATGGATTATCAATAAACCTAGAATTGATTCTTCCTGGGTCGATGCCCGAGCGGTTAATGGGGACGGACTGTAAATT - 111170_PtRNAdb chl.trna29-Tyr-GTA PLASTID Gossypium_raimondii NC_016668.1 chl 29 31961 31878 Tyr GTA 0 0 62.3 40.60 21.70 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGTCGATGCCCGAGCGGTtaATGGGGACGGACTGTAAATTCGTTGGCAATATGTCTaCGCTGGTTCAAATCCAGCTCGGCCCA 84 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.>>>>...<<<<...>>>>>.......<<<<<<<<<<<<. CTTTCAAGGAGGCAGCGGGGATTCGACTTCCCCTGGGGGTAGGGTACTACGAAAGGAAGTTGATCATGGATTATCAATAAACCTAGAATTGATTCTTCCT ATAATTCGCTGATCCGCCATAACCTAAAATGCCCATTTTTTTGTATTTTGTTTTCCCGAAAAGCCAAACAAAAAAATTAGGGAAGAATAAAAAAAGTCCA - 111171_PtRNAdb chl.trna2-Cys-GCA PLASTID Gossypium_raimondii NC_016668.1 chl 2 28804 28875 Cys GCA 0 0 64.8 39.70 25.10 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGCGACATGGCCGAGCGGTAAGGCGGGGGACTGCAAATCCCTTATtCCCCAGTTCAAATCCGGGTGTCGCCT 72 >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<<<<<. TTGTGTGTCTTGAGATACTATAACCAATTGAAGGTATGGATCCGATCTAAAAATGAAAAAGAAAAGGGGGATACTCTCCTTTTTTTGTTTGTAGCCTTTT GATCAACAAAAAACTCGAAATCCTAACGTCTCCTAACGTCTAGGATTCAAGGAAAAACTAAAGTAGTGGAAGGGAATCAGTAAATCTTGATATGGGAGCC + 111172_PtRNAdb chl.trna30-Asp-GTC PLASTID Gossypium_raimondii NC_016668.1 chl 30 31374 31301 Asp GTC 0 0 67.0 49.50 17.50 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGATTGTAGTTCAATTGGTcAGAGCACCGCCCTGTCAAGGCGGAAGcTGCGGGTTCGAGCCCCGTCAGTCCCG 74 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TTGTTTGTTACAACCCGGCTTCGAATCTAAAATCTAAATAGAAAATGGCTTGAATGAAATCATAAGACTATCTATGTTGTACACTTTTCTTTATTTCCCT ACGGATAAAATTTTTAAAATACATCAATTGATCCCTCCGTTTTCTGTCAAAGGGGATACAAATGACAGAATTTCATTCCCAACGATATCTTTATCTTTTT - 111173_PtRNAdb chl.trna31-Ser-GCT PLASTID Gossypium_raimondii NC_016668.1 chl 31 8195 8108 Ser GCT 0 0 70.9 51.70 19.20 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGAGAGATGGCTGAGTGGActAAAGCGTCGGATTGCTAATCCGTTGTGCGAGTTATTCGTACCGAGGGTTCGAATCCCTCTCTTTCCG 88 >>>>>>>..>>>...........<<<..>>>>.......<<<<..>>>>>>>...<<<<<<<.>>>>>.......<<<<<<<<<<<<. ATAATCTATATAACATAATCTATATAACAAAGTCAAAAAGGGCTTTTTTCAAGCCTTTCTTTTTGCGTGCTGTAACATAGTAATTATCTTTTCTCAATTA TTTCGGTTTTTGGTAGTGGAATAGATCAAATCCTAATACCATTTCTAAAAATGAAGCAAGGAACTCTCCCTTTTTTATTCTTCGCGTCCAGGATTACGTC - 111174_PtRNAdb chl.trna32-Gln-TTG PLASTID Gossypium_raimondii NC_016668.1 chl 32 6971 6900 Gln TTG 0 0 59.2 38.20 21.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot TGGGGCGTGGCCAAGTGGTAAGGCAACGGGTTTTGGTCCCGCTATgCGGAGGTTCGAATCCTTCCGTCCCAG 72 >>>>>>>..>>>.........<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<. GTAGCAAGAATCTATTCCATAGCTATAGCTATTTGGAACTGGAATTGACGAACAAGGAATACCCATATTAGTGTTTAGTAGTTTCAAATAGAAATCAAAA AGCATACTCTATTTATATATCAGAATAACCATATCCGAATCTAAATTGCTCTTTTTTTGTTTTTAATAACCTTCTTTCTAACAGTCAAGTAGTGGAGAAA - 111175_PtRNAdb chl.trna33-His-GTG PLASTID Gossypium_raimondii NC_016668.1 chl 33 75 2 His GTG 0 0 62.8 44.70 18.10 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCGGATGTAGCCAAGTGGAtcAAGGCAGTGGATTGTGAATCCACCATgCGCGGGTTCAATTCCCGTCGTTCGCC 74 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. TAAAAAAAAAAGAATGATGACTGATAGAAATCGTTGCAATTTGTATTTGAAATATTTAAACAAGTAAAAAAATACTATAGAGTATACTAATTGTAGGGGG C - 111176_PtRNAdb chl.trna3-Thr-GGT PLASTID Gossypium_raimondii NC_016668.1 chl 3 32906 32977 Thr GGT 0 0 65.9 36.40 29.50 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCCCTTTTAACTCAGTGGTAGAGTAACGCCATGGTAAGGCGTAAGtCATCGGTTCAAATCCGATAAGGGGCT 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. ATTCCTGAGAGCTACTAGCCACTATGAGTCTACTGCATATACTTATATATATAAATAGATCTTATCCGTCTACTGATTCATTCAGTAATTGAGTCGAACC TTTGACTTTTTTTTCATAAAACTCCTATGAAATGGTAGTATTCATATTGAAACATAAGGATGTTGTTTTTATTGGTAATAAAAACCCAACTGTATATGTA + 111177_PtRNAdb chl.trna4-Gly-GCC PLASTID Gossypium_raimondii NC_016668.1 chl 4 38487 38557 Gly GCC 0 0 63.0 44.00 19.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot GCGGATATAGTCGAATGGTAAAATTTCTCTTTGCCAAGGAGAAGACGCGGGTTCGATTCCCGCTATCCGCC 71 >>>>>>>..>>...........<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. GTTTAGTAGTGGAATTTGATAAAATCGCCCTGAACTGAAGAAAGTATCTGTCCTAGCTCTGACCAAATAGTCTTTCGTATCAAGAATCAAGAACGAAAAT CAGGGCAATGTATTTAAGATAAGAGGATAAAAGATTCGTTATAGTTGACTGTAAATAGTTGACTGGAATTGGAATATAATACACCCCCCTAAAAGAAAAA + 111178_PtRNAdb chl.trna5-Ser-GGA PLASTID Gossypium_raimondii NC_016668.1 chl 5 47122 47208 Ser GGA 0 0 72.9 44.90 28.00 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGAGAGATGGCCGAGTGGTtcAAGGCGTAGCATTGGAACTGCTATGTAGACTCTTGTTTACCGAGGGTTCGAATCCCTCTCTTTCCG 87 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>....<<<<<<.>>>>>.......<<<<<<<<<<<<. GCAAGTTTCCTAGTTAGAATTGATATTGTTCGTACCTATCGAACAATCTAATATGAATAACTCGCTATTCGCTCGGGGTATCGGCCATAATAATTATGTA CACCTTCACCTAATTCGCCGATGTAACTGACTACAATGTATCAAATCAAATAAGAACATATACTAAAGAATTAGACCCTTCTTTAGTATAGATTCTCTAT + 111179_PtRNAdb chl.trna6-Phe-GAA PLASTID Gossypium_raimondii NC_016668.1 chl 6 51129 51201 Phe GAA 0 0 68.5 46.00 22.50 Inf n/a n/a n/a Phanerogamae -NA- Dicot GTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGtCACCAGTTCAAATCTGGTTCCTGGCA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAGACCTTTAATTTAATACTTTTTCGTTTTTTTTTGTTTTCATTTTTAATTGACATAGACCCAAGTCATCTAGTATTATGAGGATAATGCGTCGGTAATG TATGATTAATTTGTATGAGTATCTACTCTACAAATTAATTGATATGGATCGACATAATACATACTTATCTAGCTAGGTATCTGAGAGTAAACCCTCTCTT + 111180_PtRNAdb chl.trna7-Met-CAT PLASTID Gossypium_raimondii NC_016668.1 chl 7 55386 55458 Met CAT 0 0 58.1 34.30 23.80 Inf n/a n/a n/a Phanerogamae -NA- Dicot ACCTACTTAACTCAGCGGTtAGAGTATTGCTTTCATACGGCGGGAGtCATTGGTTCAAATCCAATAGTAGGTA 73 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. CTGTTTGATTGGTATTGCTTAGAAGTAATATTGGATTTATAATCCATCGATGTAATAGGTCCCTTTTCTTTCTCTTTATGATTCCTTATGATAATAAATG GAACTTATTAGATACCATCGATCCCGGTGTCTAATAAGTTTTTCTACCCACCTTCTTTTATTGATTTTCTATCTTTTTCATCCTATTCTATTTCCGTTTT + 111181_PtRNAdb chl.trna8-Val-GAC PLASTID Gossypium_raimondii NC_016668.1 chl 8 105276 105347 Val GAC 0 0 58.9 28.60 30.30 Inf n/a n/a n/a Phanerogamae -NA- Dicot AGGGATATAACTCAGCGGTAGAGTGTCACCTTGACGTGGTGGAAGtCATCAGTTCGAGCCTGATTATCCCTA 72 >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. GAAAGCCTGGCTCCAAGTTGTTCAAGAATAGTGGCGTTGTTGAGTTTCTCGATCCTTTGACTTAGGATTAGTCAGTTCTATTTCTTGATGGGGGCAGGGA AACCCAATGTGAGTTTTTCTATTTTGCCTTGCCCCCCGCCGTGATCGAATAAGAATGGATAAGAGGCTCGTGGGATTGACGTGAGGGGGTAGGGATGGCT + 111182_PtRNAdb chl.trna9-Ile-GAT PLASTID Gossypium_raimondii NC_016668.1 chl 9 107358 107445 Ile GAT 107394 107409 16.4 0.00 16.40 Inf n/a n/a n/a Phanerogamae -NA- Dicot GGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATATGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCA 72 >>>>>>>..>>>>.......<<<<..>>>>.......................<<<<...>>>>><<<<<..>>>..<<<<<<<<<<. TCCCTCCCATGTGGCGACATGGGGGCGTAAAAAGGAAAGAGAGGGATGGGGTTTCTCTCGCTTTTGGCATAGCGGGCCCCCAGCGGGAGGCCCGCACGAC ATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTC +