PtRF Id	Plant Name	tRF Type	Tissue	Gene Coordinates	tRNA Name	Anticodon	GSM Number	PMID	Sequence
PT-1185	Physcomitrella patens	tRF-1	Wild-type protonemata, 10-day old	scaffold114:785767-785918	scaffold_114.trna1-ThrCGT	ThrCGT	GSM410805	19850910	CACGTAGCCAATTTATAGTTTCGC	
PT-26093	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313217	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-26094	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313217	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-26095	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313217	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-26096	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313217	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-26097	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313217	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-26098	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313216	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-26099	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313216	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-26100	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313216	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-26101	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313216	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-26102	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313216	19096705	AGTTCGATCCTCACTGGGGGCACCA	
PT-44784	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313216	19096705	ATCCTCACTGGGGGCACCA	
PT-127023	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313214	19096705	CGATCCTCACTGGGGGCACCA	
PT-127024	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313214	19096705	CGATCCTCACTGGGGGCACCA	
PT-127025	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313214	19096705	CGATCCTCACTGGGGGCACCA	
PT-127026	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313214	19096705	CGATCCTCACTGGGGGCACCA	
PT-127027	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313214	19096705	CGATCCTCACTGGGGGCACCA	
PT-127028	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313215	19096705	CGATCCTCACTGGGGGCACCA	
PT-127029	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313215	19096705	CGATCCTCACTGGGGGCACCA	
PT-127030	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313215	19096705	CGATCCTCACTGGGGGCACCA	
PT-127031	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313215	19096705	CGATCCTCACTGGGGGCACCA	
PT-127032	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313215	19096705	CGATCCTCACTGGGGGCACCA	
PT-127033	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	CGATCCTCACTGGGGGCACCA	
PT-127034	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	CGATCCTCACTGGGGGCACCA	
PT-127035	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313212	19096705,27681945	CGATCCTCACTGGGGGCACCA	
PT-127036	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	CGATCCTCACTGGGGGCACCA	
PT-127037	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	CGATCCTCACTGGGGGCACCA	
PT-127038	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313213	19096705	CGATCCTCACTGGGGGCACCA	
PT-127039	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313213	19096705	CGATCCTCACTGGGGGCACCA	
PT-127040	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313213	19096705	CGATCCTCACTGGGGGCACCA	
PT-127041	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313213	19096705	CGATCCTCACTGGGGGCACCA	
PT-127042	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313213	19096705	CGATCCTCACTGGGGGCACCA	
PT-170814	Physcomitrella patens	tRF-3	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313217	19096705	GATCCTCACTGGGGGCACCA	
PT-170815	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313213	19096705	GATCCTCACTGGGGGCACCA	
PT-170816	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313215	19096705	GATCCTCACTGGGGGCACCA	
PT-170817	Physcomitrella patens	tRF-3	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313214	19096705	GATCCTCACTGGGGGCACCA	
PT-170818	Physcomitrella patens	tRF-3	Physcomitrella patens 10day Wild-Type Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	GATCCTCACTGGGGGCACCA	
PT-205607	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313213	19096705	GCCTCCATAGCTTAGTGGTAGA	
PT-205608	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	GCCTCCATAGCTTAGTGGTAGA	
PT-205609	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313217	19096705	GCCTCCATAGCTTAGTGGTAGAGC	
PT-205610	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM313216	19096705	GCCTCCATAGCTTAGTGGTAGAGC	
PT-205611	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313215	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205612	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313215	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205613	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313215	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205614	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313215	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205615	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-10 Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313215	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205616	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313214	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205617	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313214	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205618	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313214	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205619	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313214	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205620	Physcomitrella patens	tRF-5	Physcomitrella patens 10day dcl3-5 Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313214	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205621	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	GCCTCCATGGCTTAGTGGTAGA	
PT-205622	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313212	19096705,27681945	GCCTCCATGGCTTAGTGGTAGA	
PT-205623	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	GCCTCCATGGCTTAGTGGTAGA	
PT-205624	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	GCCTCCATGGCTTAGTGGTAGA	
PT-205625	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313212	19096705,27681945	GCCTCCATGGCTTAGTGGTAGA	
PT-205626	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313213	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205627	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313213	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205628	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313213	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205629	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313213	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205630	Physcomitrella patens	tRF-5	Physcomitrella patens 10day Wild-Type Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313213	19096705	GCCTCCATGGCTTAGTGGTAGA	
PT-205631	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313217	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-205632	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313217	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-205633	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313217	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-205634	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313217	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-205635	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313217	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-205636	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM313216	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-205637	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM313216	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-205638	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM313216	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-205639	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM313216	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-205640	Physcomitrella patens	tRF-5	Physcomitrella patens 10day rdr6-19 Protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM313216	19096705	GCCTCCATGGCTTAGTGGTAGAGC	
PT-434185	Physcomitrella patens	tRF-3	14 day old P. patens	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM115096	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434186	Physcomitrella patens	tRF-3	14 day old P. patens	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM115096	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434187	Physcomitrella patens	tRF-3	14 day old P. patens	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM115096	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434188	Physcomitrella patens	tRF-3	14 day old P. patens	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM115096	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434189	Physcomitrella patens	tRF-3	14 day old P. patens	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM115096	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434190	Physcomitrella patens	tRF-3	14 day old P. patens	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM115096	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434191	Physcomitrella patens	tRF-3	7 day protonemata	scaffold114:785807-785878	scaffold_114.trna1-ThrCGT	ThrCGT	GSM115095	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434192	Physcomitrella patens	tRF-3	7 day protonemata	scaffold134:672986-673057	scaffold_134.trna1-ThrCGT	ThrCGT	GSM115095	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434193	Physcomitrella patens	tRF-3	7 day protonemata	scaffold134:740533-740604	scaffold_134.trna2-ThrCGT	ThrCGT	GSM115095	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434194	Physcomitrella patens	tRF-3	7 day protonemata	scaffold16:2250878-2250949	scaffold_16.trna1-ThrCGT	ThrCGT	GSM115095	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434195	Physcomitrella patens	tRF-3	7 day protonemata	scaffold192:679880-679951	scaffold_192.trna1-ThrCGT	ThrCGT	GSM115095	17601824,17081978	TCCTCACTGGGGGCACCA	
PT-434196	Physcomitrella patens	tRF-3	7 day protonemata	scaffold40:164963-165034	scaffold_40.trna1-ThrCGT	ThrCGT	GSM115095	17601824,17081978	TCCTCACTGGGGGCACCA