PtRF Id Plant Name tRF Type Tissue Gene Coordinates tRNA Name Anticodon GSM Number PMID Sequence PT-1978 Physcomitrella patens tRF-1 Wild-type protonemata, 10-day old scaffold299:397703-397854 scaffold_299.trna1-GlnTTG GlnTTG GSM410805 19850910 GCGATCGCGATGCAGTTTACAGAT PT-10009 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM313216 19096705 AATCTCGCCGGGACCTCCA PT-10010 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM313215 19096705 AATCTCGCCGGGACCTCCA PT-10011 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM313213 19096705 AATCTCGCCGGGACCTCCA PT-10012 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM313217 19096705 AATCTCGCCGGGACCTCCA PT-10013 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM313214 19096705 AATCTCGCCGGGACCTCCA PT-10021 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold146:949284-949355 scaffold_146.trna1-GlnTTG GlnTTG GSM313213 19096705 AATCTCGGTGGGACCTCCA PT-10022 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold146:949284-949355 scaffold_146.trna1-GlnTTG GlnTTG GSM313217 19096705 AATCTCGGTGGGACCTCCA PT-10023 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold146:949284-949355 scaffold_146.trna1-GlnTTG GlnTTG GSM313215 19096705 AATCTCGGTGGGACCTCCA PT-24827 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313213 19096705 AGTTCGAATCTCGGTAGGGCCTCCA PT-24828 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313217 19096705 AGTTCGAATCTCGGTAGGGCCTCCA PT-24829 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313216 19096705 AGTTCGAATCTCGGTAGGGCCTCCA PT-24830 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313212 19096705,27681945 AGTTCGAATCTCGGTAGGGCCTCCA PT-24831 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313212 19096705,27681945 AGTTCGAATCTCGGTGGGACCTCCA PT-24832 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313212 19096705,27681945 AGTTCGAATCTCGGTGGGACCTCCA PT-24833 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313213 19096705 AGTTCGAATCTCGGTGGGACCTCCA PT-24834 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313213 19096705 AGTTCGAATCTCGGTGGGACCTCCA PT-24835 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313216 19096705 AGTTCGAATCTCGGTGGGACCTCCA PT-24836 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313216 19096705 AGTTCGAATCTCGGTGGGACCTCCA PT-24837 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313214 19096705 AGTTCGAATCTCGGTGGGACCTCCA PT-24838 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313214 19096705 AGTTCGAATCTCGGTGGGACCTCCA PT-24839 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313215 19096705 AGTTCGAATCTCGGTGGGACCTCCA PT-24840 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313215 19096705 AGTTCGAATCTCGGTGGGACCTCCA PT-24841 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold268:539209-539280 scaffold_268.trna1-GlnTTG GlnTTG GSM313215 19096705 AGTTCGAATCTCGGTGGGGCCTCCA PT-24842 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold268:593394-593465 scaffold_268.trna3-GlnTTG GlnTTG GSM313215 19096705 AGTTCGAATCTCGGTGGGGCCTCCA PT-24843 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold268:550719-550790 scaffold_268.trna5-GlnTTG GlnTTG GSM313215 19096705 AGTTCGAATCTCGGTGGGGCCTCCA PT-168435 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313214 19096705 GAGTTCGAATCTCGGTAGGGCCTCCA PT-168436 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313215 19096705 GAGTTCGAATCTCGGTAGGGCCTCCA PT-168437 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313217 19096705 GAGTTCGAATCTCGGTGGGACCTCCA PT-168438 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313217 19096705 GAGTTCGAATCTCGGTGGGACCTCCA PT-168439 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold268:539209-539280 scaffold_268.trna1-GlnTTG GlnTTG GSM313215 19096705 GAGTTCGAATCTCGGTGGGGCCTCCA PT-168440 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold268:593394-593465 scaffold_268.trna3-GlnTTG GlnTTG GSM313215 19096705 GAGTTCGAATCTCGGTGGGGCCTCCA PT-168441 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold268:550719-550790 scaffold_268.trna5-GlnTTG GlnTTG GSM313215 19096705 GAGTTCGAATCTCGGTGGGGCCTCCA PT-261894 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold268:539209-539280 scaffold_268.trna1-GlnTTG GlnTTG GSM313212 19096705,27681945 GGCTCCATAGTCCAGTGGTTACGA PT-261895 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold268:593394-593465 scaffold_268.trna3-GlnTTG GlnTTG GSM313212 19096705,27681945 GGCTCCATAGTCCAGTGGTTACGA PT-261896 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold268:550719-550790 scaffold_268.trna5-GlnTTG GlnTTG GSM313212 19096705,27681945 GGCTCCATAGTCCAGTGGTTACGA PT-261897 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold268:539209-539280 scaffold_268.trna1-GlnTTG GlnTTG GSM313213 19096705 GGCTCCATAGTCCAGTGGTTACGAC PT-261898 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold268:593394-593465 scaffold_268.trna3-GlnTTG GlnTTG GSM313213 19096705 GGCTCCATAGTCCAGTGGTTACGAC PT-261899 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold268:550719-550790 scaffold_268.trna5-GlnTTG GlnTTG GSM313213 19096705 GGCTCCATAGTCCAGTGGTTACGAC PT-261900 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313214 19096705 GGCTCTATGGTCCAGTGGTT PT-261901 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313215 19096705 GGCTCTATGGTCCAGTGGTTAC PT-261902 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313212 19096705,27681945 GGCTCTATGGTCCAGTGGTTAC PT-261903 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313213 19096705 GGCTCTATGGTCCAGTGGTTAC PT-261904 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313216 19096705 GGCTCTATGGTCCAGTGGTTAC PT-261905 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold299:397743-397814 scaffold_299.trna1-GlnTTG GlnTTG GSM313217 19096705 GGCTCTATGGTCCAGTGGTTACGAC PT-311514 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313215 19096705 GGTCCCATGGTCCAGTGGTT PT-311515 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313215 19096705 GGTCCCATGGTCCAGTGGTT PT-311516 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313214 19096705 GGTCCCATGGTCCAGTGGTT PT-311517 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313214 19096705 GGTCCCATGGTCCAGTGGTT PT-311518 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313212 19096705,27681945 GGTCCCATGGTCCAGTGGTTA PT-311519 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313212 19096705,27681945 GGTCCCATGGTCCAGTGGTTA PT-311520 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313213 19096705 GGTCCCATGGTCCAGTGGTTA PT-311521 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313213 19096705 GGTCCCATGGTCCAGTGGTTA PT-311522 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313216 19096705 GGTCCCATGGTCCAGTGGTTAC PT-311523 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313216 19096705 GGTCCCATGGTCCAGTGGTTAC PT-311524 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold35:839954-840025 scaffold_35.trna1-GlnTTG GlnTTG GSM313217 19096705 GGTCCCATGGTCCAGTGGTTAC PT-311525 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold49:60470-60541 scaffold_49.trna4-GlnTTG GlnTTG GSM313217 19096705 GGTCCCATGGTCCAGTGGTTAC PT-314174 Physcomitrella patens tRF-5 7 day protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM115095 17601824,17081978 GGTCCCGTAGTCTAGC PT-314175 Physcomitrella patens tRF-5 ~60 day Gametophores and Sporophytes scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM115097 17601824,17081978 GGTCCCGTAGTCTAGC PT-314191 Physcomitrella patens tRF-5 14 day old P. patens scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM115096 17601824,17081978 GGTCCCGTAGTCTAGC PT-314201 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM313217 19096705 GGTCCCGTAGTCTAGCGGTCAGGAC PT-314209 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM313216 19096705 GGTCCCGTAGTCTAGCGGTCAGGAC PT-314217 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM313213 19096705 GGTCCCGTAGTCTAGCGGTCAGGAC PT-314225 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold40:1137620-1137691 scaffold_40.trna3-GlnTTG GlnTTG GSM313212 19096705,27681945 GGTCCCGTAGTCTAGCGGTCAGGACA PT-441103 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold268:539209-539280 scaffold_268.trna1-GlnTTG GlnTTG GSM313214 19096705 TCGAATCTCGGTGGGGCCTCCA PT-441104 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold268:593394-593465 scaffold_268.trna3-GlnTTG GlnTTG GSM313214 19096705 TCGAATCTCGGTGGGGCCTCCA PT-441105 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold268:550719-550790 scaffold_268.trna5-GlnTTG GlnTTG GSM313214 19096705 TCGAATCTCGGTGGGGCCTCCA PT-446235 Physcomitrella patens tRF-5 ~60 day Gametophores and Sporophytes scaffold352:321780-321851 scaffold_352.trna1-GlnTTG GlnTTG GSM115097 17601824,17081978 TGGAGTATAGCCAAGTGGA PT-446236 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold352:321780-321851 scaffold_352.trna1-GlnTTG GlnTTG GSM313214 19096705 TGGAGTATAGCCAAGTGGAA PT-446237 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold352:321780-321851 scaffold_352.trna1-GlnTTG GlnTTG GSM313215 19096705 TGGAGTATAGCCAAGTGGAA