PtRF Id Plant Name tRF Type Tissue Gene Coordinates tRNA Name Anticodon GSM Number PMID Sequence PT-61378 Brachypodium distachyon tRF-3 Leaf chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266842 24367943 CAACTCTCAATGAAAGCACCA PT-61379 Brachypodium distachyon tRF-3 Leaf chr1:4997295-4997498 chr1.trna19-ThrAGT ThrAGT GSM1266842 24367943 CAACTCTCAATGAAAGCACCA PT-61380 Brachypodium distachyon tRF-3 Leaf chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266842 24367943 CAACTCTCAATGAAAGCACCA PT-61381 Brachypodium distachyon tRF-3 Leaf chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266842 24367943 CAACTCTCAATGAAAGCACCA PT-61382 Brachypodium distachyon tRF-3 Leaf chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266842 24367943 CAACTCTCAATGAAAGCACCA PT-61383 Brachypodium distachyon tRF-3 Leaf chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM1266842 24367943 CAACTCTCAATGAAAGCACCA PT-148686 Brachypodium distachyon tRF-3 root, shoot, leaf (vegetative) chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM406303 19499258 CTCTCAACGAAAGCACCA PT-148752 Brachypodium distachyon tRF-3 Leaf and stem chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM1266844 24367943 CTCTCAACGAAAGCACCA PT-148992 Brachypodium distachyon tRF-3 young spike (reproductive) chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM406302 19499258 CTCTCAACGAAAGCACCA PT-148998 Brachypodium distachyon tRF-3 root, shoot, leaf (vegetative) chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM406303 19499258 CTCTCAACGAGAGCACCA PT-149007 Brachypodium distachyon tRF-3 young spike (reproductive) chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM406302 19499258 CTCTCAACGAGAGCACCA PT-149072 Brachypodium distachyon tRF-3 root, shoot, leaf (vegetative) chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM406303 19499258 CTCTCAATGAAAGCACCA PT-149073 Brachypodium distachyon tRF-3 root, shoot, leaf (vegetative) chr1:4997295-4997498 chr1.trna19-ThrAGT ThrAGT GSM406303 19499258 CTCTCAATGAAAGCACCA PT-149074 Brachypodium distachyon tRF-3 root, shoot, leaf (vegetative) chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM406303 19499258 CTCTCAATGAAAGCACCA PT-149075 Brachypodium distachyon tRF-3 root, shoot, leaf (vegetative) chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM406303 19499258 CTCTCAATGAAAGCACCA PT-149076 Brachypodium distachyon tRF-3 root, shoot, leaf (vegetative) chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM406303 19499258 CTCTCAATGAAAGCACCA PT-149077 Brachypodium distachyon tRF-3 root, shoot, leaf (vegetative) chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM406303 19499258 CTCTCAATGAAAGCACCA PT-149670 Brachypodium distachyon tRF-3 Leaf and stem chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266844 24367943 CTCTCAATGAAAGCACCA PT-149671 Brachypodium distachyon tRF-3 Leaf and stem chr1:4997295-4997498 chr1.trna19-ThrAGT ThrAGT GSM1266844 24367943 CTCTCAATGAAAGCACCA PT-149672 Brachypodium distachyon tRF-3 Leaf and stem chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266844 24367943 CTCTCAATGAAAGCACCA PT-149673 Brachypodium distachyon tRF-3 Leaf and stem chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266844 24367943 CTCTCAATGAAAGCACCA PT-149674 Brachypodium distachyon tRF-3 Leaf and stem chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266844 24367943 CTCTCAATGAAAGCACCA PT-149675 Brachypodium distachyon tRF-3 Leaf and stem chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM1266844 24367943 CTCTCAATGAAAGCACCA PT-149940 Brachypodium distachyon tRF-3 young spike (reproductive) chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM406302 19499258 CTCTCAATGAAAGCACCA PT-149941 Brachypodium distachyon tRF-3 young spike (reproductive) chr1:4997295-4997498 chr1.trna19-ThrAGT ThrAGT GSM406302 19499258 CTCTCAATGAAAGCACCA PT-149942 Brachypodium distachyon tRF-3 young spike (reproductive) chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM406302 19499258 CTCTCAATGAAAGCACCA PT-149943 Brachypodium distachyon tRF-3 young spike (reproductive) chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM406302 19499258 CTCTCAATGAAAGCACCA PT-149944 Brachypodium distachyon tRF-3 young spike (reproductive) chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM406302 19499258 CTCTCAATGAAAGCACCA PT-149945 Brachypodium distachyon tRF-3 young spike (reproductive) chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM406302 19499258 CTCTCAATGAAAGCACCA PT-168225 Brachypodium distachyon tRF-3 Shoot chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266852 24367943 GAGTTCAACTCTCAATGAAAGCACCA PT-168226 Brachypodium distachyon tRF-3 Shoot chr1:4997295-4997498 chr1.trna19-ThrAGT ThrAGT GSM1266852 24367943 GAGTTCAACTCTCAATGAAAGCACCA PT-168227 Brachypodium distachyon tRF-3 Shoot chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266852 24367943 GAGTTCAACTCTCAATGAAAGCACCA PT-168228 Brachypodium distachyon tRF-3 Shoot chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266852 24367943 GAGTTCAACTCTCAATGAAAGCACCA PT-168229 Brachypodium distachyon tRF-3 Shoot chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266852 24367943 GAGTTCAACTCTCAATGAAAGCACCA PT-168230 Brachypodium distachyon tRF-3 Shoot chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM1266852 24367943 GAGTTCAACTCTCAATGAAAGCACCA PT-240973 Brachypodium distachyon tRF-5 Root chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM1266839 24367943 GCTCTCGTAGCTCAGTTGG PT-240997 Brachypodium distachyon tRF-5 young spike (reproductive) chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM406302 19499258 GCTCTCGTAGCTCAGTTGG PT-241003 Brachypodium distachyon tRF-5 root, shoot, leaf (vegetative) chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM406303 19499258 GCTCTCGTAGCTCAGTTGG PT-241031 Brachypodium distachyon tRF-5 Shoot chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM1266850 24367943 GCTCTCGTAGCTCAGTTGGT PT-241051 Brachypodium distachyon tRF-5 Leaf chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM1266841 24367943 GCTCTCGTAGCTCAGTTGGT PT-241078 Brachypodium distachyon tRF-5 Shoot chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM1266852 24367943 GCTCTCGTAGCTCAGTTGGT PT-241190 Brachypodium distachyon tRF-5 Shoot chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM1266849 24367943 GCTCTCGTAGCTCAGTTGGT PT-241287 Brachypodium distachyon tRF-5 Shoot chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM1266847 24367943 GCTCTCGTAGCTCAGTTGGT PT-250302 Brachypodium distachyon tRF-5 Shoot chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM1266852 24367943 GCTTTCATAGCTCAGTTGG PT-250313 Brachypodium distachyon tRF-5 Shoot chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266853 24367943 GCTTTCATAGCTCAGTTGG PT-250314 Brachypodium distachyon tRF-5 Shoot chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266853 24367943 GCTTTCATAGCTCAGTTGG PT-250315 Brachypodium distachyon tRF-5 Shoot chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266853 24367943 GCTTTCATAGCTCAGTTGG PT-250316 Brachypodium distachyon tRF-5 Shoot chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266853 24367943 GCTTTCATAGCTCAGTTGG PT-250317 Brachypodium distachyon tRF-5 Shoot chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM1266853 24367943 GCTTTCATAGCTCAGTTGG PT-250338 Brachypodium distachyon tRF-5 Seedling chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266840 24367943 GCTTTCATAGCTCAGTTGG PT-250339 Brachypodium distachyon tRF-5 Seedling chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266840 24367943 GCTTTCATAGCTCAGTTGG PT-250340 Brachypodium distachyon tRF-5 Seedling chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266840 24367943 GCTTTCATAGCTCAGTTGG PT-250341 Brachypodium distachyon tRF-5 Seedling chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266840 24367943 GCTTTCATAGCTCAGTTGG PT-250342 Brachypodium distachyon tRF-5 Seedling chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM1266840 24367943 GCTTTCATAGCTCAGTTGG PT-250343 Brachypodium distachyon tRF-5 young spike (reproductive) chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM406302 19499258 GCTTTCATAGCTCAGTTGG PT-250344 Brachypodium distachyon tRF-5 young spike (reproductive) chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM406302 19499258 GCTTTCATAGCTCAGTTGG PT-250345 Brachypodium distachyon tRF-5 young spike (reproductive) chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM406302 19499258 GCTTTCATAGCTCAGTTGG PT-250346 Brachypodium distachyon tRF-5 young spike (reproductive) chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM406302 19499258 GCTTTCATAGCTCAGTTGG PT-250347 Brachypodium distachyon tRF-5 young spike (reproductive) chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM406302 19499258 GCTTTCATAGCTCAGTTGG PT-250348 Brachypodium distachyon tRF-5 Leaf chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266842 24367943 GCTTTCATAGCTCAGTTGG PT-250349 Brachypodium distachyon tRF-5 Leaf chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266842 24367943 GCTTTCATAGCTCAGTTGG PT-250350 Brachypodium distachyon tRF-5 Leaf chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266842 24367943 GCTTTCATAGCTCAGTTGG PT-250351 Brachypodium distachyon tRF-5 Leaf chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266842 24367943 GCTTTCATAGCTCAGTTGG PT-250352 Brachypodium distachyon tRF-5 Leaf chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM1266842 24367943 GCTTTCATAGCTCAGTTGG PT-250358 Brachypodium distachyon tRF-5 Leaf and stem chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266844 24367943 GCTTTCATAGCTCAGTTGG PT-250359 Brachypodium distachyon tRF-5 Leaf and stem chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266844 24367943 GCTTTCATAGCTCAGTTGG PT-250360 Brachypodium distachyon tRF-5 Leaf and stem chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266844 24367943 GCTTTCATAGCTCAGTTGG PT-250361 Brachypodium distachyon tRF-5 Leaf and stem chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266844 24367943 GCTTTCATAGCTCAGTTGG PT-250362 Brachypodium distachyon tRF-5 Leaf and stem chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM1266844 24367943 GCTTTCATAGCTCAGTTGG PT-250363 Brachypodium distachyon tRF-5 root, shoot, leaf (vegetative) chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM406303 19499258 GCTTTCATAGCTCAGTTGG PT-250364 Brachypodium distachyon tRF-5 root, shoot, leaf (vegetative) chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM406303 19499258 GCTTTCATAGCTCAGTTGG PT-250365 Brachypodium distachyon tRF-5 root, shoot, leaf (vegetative) chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM406303 19499258 GCTTTCATAGCTCAGTTGG PT-250366 Brachypodium distachyon tRF-5 root, shoot, leaf (vegetative) chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM406303 19499258 GCTTTCATAGCTCAGTTGG PT-250367 Brachypodium distachyon tRF-5 root, shoot, leaf (vegetative) chr5:18263979-18264055 chr5.trna19-ThrAGT ThrAGT GSM406303 19499258 GCTTTCATAGCTCAGTTGG PT-250368 Brachypodium distachyon tRF-5 Panicle chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266857 24367943 GCTTTCATAGCTCAGTTGGT PT-250369 Brachypodium distachyon tRF-5 Panicle chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266857 24367943 GCTTTCATAGCTCAGTTGGT PT-250370 Brachypodium distachyon tRF-5 Panicle chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266857 24367943 GCTTTCATAGCTCAGTTGGT PT-250371 Brachypodium distachyon tRF-5 Panicle chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266857 24367943 GCTTTCATAGCTCAGTTGGT PT-250438 Brachypodium distachyon tRF-5 Shoot chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266853 24367943 GCTTTCATAGCTCAGTTGGT PT-250439 Brachypodium distachyon tRF-5 Shoot chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266853 24367943 GCTTTCATAGCTCAGTTGGT PT-250440 Brachypodium distachyon tRF-5 Shoot chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266853 24367943 GCTTTCATAGCTCAGTTGGT PT-250441 Brachypodium distachyon tRF-5 Shoot chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266853 24367943 GCTTTCATAGCTCAGTTGGT PT-250510 Brachypodium distachyon tRF-5 Shoot chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266852 24367943 GCTTTCATAGCTCAGTTGGT PT-250511 Brachypodium distachyon tRF-5 Shoot chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266852 24367943 GCTTTCATAGCTCAGTTGGT PT-250512 Brachypodium distachyon tRF-5 Shoot chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266852 24367943 GCTTTCATAGCTCAGTTGGT PT-250513 Brachypodium distachyon tRF-5 Shoot chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266852 24367943 GCTTTCATAGCTCAGTTGGT PT-250588 Brachypodium distachyon tRF-5 Shoot chr1:67616255-67616328 chr1.trna110-ThrAGT ThrAGT GSM1266850 24367943 GCTTTCATAGCTCAGTTGGTT PT-250589 Brachypodium distachyon tRF-5 Shoot chr1:9629726-9629798 chr1.trna22-ThrAGT ThrAGT GSM1266850 24367943 GCTTTCATAGCTCAGTTGGTT PT-250590 Brachypodium distachyon tRF-5 Shoot chr4:441647-441720 chr4.trna1-ThrAGT ThrAGT GSM1266850 24367943 GCTTTCATAGCTCAGTTGGTT PT-250591 Brachypodium distachyon tRF-5 Shoot chr4:45715081-45715154 chr4.trna46-ThrAGT ThrAGT GSM1266850 24367943 GCTTTCATAGCTCAGTTGGTT PT-250924 Brachypodium distachyon tRF-5 Root chr1:56682862-56682933 chr1.trna70-ThrAGT ThrAGT GSM1266839 24367943 GCTTTCGTAGCTCAGTTGG PT-250925 Brachypodium distachyon tRF-5 Root chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM1266839 24367943 GCTTTCGTAGCTCAGTTGG PT-250926 Brachypodium distachyon tRF-5 Shoot chr1:56682862-56682933 chr1.trna70-ThrAGT ThrAGT GSM1266847 24367943 GCTTTCGTAGCTCAGTTGG PT-250927 Brachypodium distachyon tRF-5 Shoot chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM1266847 24367943 GCTTTCGTAGCTCAGTTGG PT-250928 Brachypodium distachyon tRF-5 root, shoot, leaf (vegetative) chr1:56682862-56682933 chr1.trna70-ThrAGT ThrAGT GSM406303 19499258 GCTTTCGTAGCTCAGTTGG PT-250929 Brachypodium distachyon tRF-5 root, shoot, leaf (vegetative) chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM406303 19499258 GCTTTCGTAGCTCAGTTGG PT-250930 Brachypodium distachyon tRF-5 Leaf chr1:56682862-56682933 chr1.trna70-ThrAGT ThrAGT GSM1266841 24367943 GCTTTCGTAGCTCAGTTGGT PT-250931 Brachypodium distachyon tRF-5 Leaf chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM1266841 24367943 GCTTTCGTAGCTCAGTTGGT PT-250932 Brachypodium distachyon tRF-5 Shoot chr1:56682862-56682933 chr1.trna70-ThrAGT ThrAGT GSM1266852 24367943 GCTTTCGTAGCTCAGTTGGT PT-250933 Brachypodium distachyon tRF-5 Shoot chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM1266852 24367943 GCTTTCGTAGCTCAGTTGGT PT-250941 Brachypodium distachyon tRF-5 Shoot chr1:56682862-56682933 chr1.trna70-ThrAGT ThrAGT GSM1266849 24367943 GCTTTCGTAGCTCAGTTGGT PT-250942 Brachypodium distachyon tRF-5 Shoot chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM1266849 24367943 GCTTTCGTAGCTCAGTTGGT PT-250963 Brachypodium distachyon tRF-5 Shoot chr1:56682862-56682933 chr1.trna70-ThrAGT ThrAGT GSM1266850 24367943 GCTTTCGTAGCTCAGTTGGT PT-250964 Brachypodium distachyon tRF-5 Shoot chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM1266850 24367943 GCTTTCGTAGCTCAGTTGGT PT-250975 Brachypodium distachyon tRF-5 Leaf and stem chr1:56682862-56682933 chr1.trna70-ThrAGT ThrAGT GSM1266844 24367943 GCTTTCGTAGCTCAGTTGGTTA PT-250976 Brachypodium distachyon tRF-5 Leaf and stem chr2:50679605-50679678 chr2.trna55-ThrAGT ThrAGT GSM1266844 24367943 GCTTTCGTAGCTCAGTTGGTTA PT-403270 Brachypodium distachyon tRF-3 Leaf chr2:35184008-35184081 chr2.trna44-ThrAGT ThrAGT GSM1266842 24367943 TCAACTCTCAACGAGAGCACCA