PtRF Id Plant Name tRF Type Tissue Gene Coordinates tRNA Name Anticodon GSM Number PMID Sequence PT-21403 Oryza sativa Indica Group tRF-5 Wildtype Oryza Sativa chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1921131 AGGGATATAACTCAGC PT-21438 Oryza sativa tRF-5 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288572 26471296 AGGGATATAACTCAGC PT-21454 Oryza sativa tRF-5 the fourth leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1525456 AGGGATATAACTCAGC PT-21613 Oryza sativa tRF-5 shoot, control chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816719 22158467 AGGGATATAACTCAGCGG PT-21673 Oryza sativa tRF-5 seedling, drought chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816691 22158467 AGGGATATAACTCAGCGG PT-21690 Oryza sativa Japonica Group tRF-5 shoot chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM898990 22537016 AGGGATATAACTCAGCGGT PT-21693 Oryza sativa Japonica Group tRF-5 shoot chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM898992 22537016 AGGGATATAACTCAGCGGT PT-21696 Oryza sativa Japonica Group tRF-5 shoot chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM898993 22537016 AGGGATATAACTCAGCGGT PT-21701 Oryza sativa Japonica Group tRF-5 Osaba1-1 rice leaves chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1547540 26233894 AGGGATATAACTCAGCGGTA PT-21704 Oryza sativa tRF-5 seedlings chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM434596 20202174 AGGGATATAACTCAGCGGTA PT-21705 Oryza sativa Japonica Group tRF-5 wild type rice leaves chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1547539 26233894 AGGGATATAACTCAGCGGTA PT-21715 Oryza sativa tRF-5 seedling, heat + salt chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816699 22158467 AGGGATATAACTCAGCGGTA PT-21716 Oryza sativa tRF-5 panicle, control chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816732 22158467 AGGGATATAACTCAGCGGTA PT-21721 Oryza sativa tRF-5 Panicles chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1246112 25129133 AGGGATATAACTCAGCGGTA PT-21730 Oryza sativa tRF-5 rice seedlings chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM571077 21113019 AGGGATATAACTCAGCGGTA PT-21736 Oryza sativa tRF-5 seedling, heat chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816696 22158467 AGGGATATAACTCAGCGGTA PT-21741 Oryza sativa Indica Group tRF-5 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049384 27150822 AGGGATATAACTCAGCGGTA PT-21743 Oryza sativa Indica Group tRF-5 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049383 27150822 AGGGATATAACTCAGCGGTA PT-21744 Oryza sativa tRF-5 root, sulfate-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816709 22158467 AGGGATATAACTCAGCGGTA PT-21749 Oryza sativa tRF-5 Rice spikelets chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2048337 27702997 AGGGATATAACTCAGCGGTA PT-21759 Oryza sativa tRF-5 Panicles chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1246111 25129133 AGGGATATAACTCAGCGGTA PT-21760 Oryza sativa Japonica Group tRF-5 O.sativa_Japonica_seed_Heukgyeong chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1847446 27797952 AGGGATATAACTCAGCGGTA PT-21761 Oryza sativa tRF-5 young panicles (4cm) chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM648142 22443269 AGGGATATAACTCAGCGGTA PT-21762 Oryza sativa tRF-5 panicle, OsDCL1 RNAi chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816748 22158467 AGGGATATAACTCAGCGGTA PT-21766 Oryza sativa Indica Group tRF-5 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049382 27150822 AGGGATATAACTCAGCGGTA PT-21771 Oryza sativa tRF-5 rice seedlings chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM571078 21113019 AGGGATATAACTCAGCGGTA PT-21775 Oryza sativa Indica Group tRF-5 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049380 27150822 AGGGATATAACTCAGCGGTA PT-21776 Oryza sativa Indica Group tRF-5 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049381 27150822 AGGGATATAACTCAGCGGTA PT-21777 Oryza sativa Indica Group tRF-5 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049379 27150822 AGGGATATAACTCAGCGGTA PT-21786 Oryza sativa tRF-5 root, control chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816705 22158467 AGGGATATAACTCAGCGGTA PT-21790 Oryza sativa tRF-5 seedling, heat + drought chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816698 22158467 AGGGATATAACTCAGCGGTA PT-21820 Oryza sativa Indica Group tRF-5 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049378 27150822 AGGGATATAACTCAGCGGTA PT-21824 Oryza sativa Indica Group tRF-5 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049377 27150822 AGGGATATAACTCAGCGGTA PT-21829 Oryza sativa tRF-5 young panicles (4cm) chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM648140 22443269 AGGGATATAACTCAGCGGTA PT-21838 Oryza sativa tRF-5 young panicles (4cm) chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM648139 22443269 AGGGATATAACTCAGCGGTA PT-21839 Oryza sativa tRF-5 seedling, cold chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816694 22158467 AGGGATATAACTCAGCGGTA PT-21840 Oryza sativa tRF-5 Flag leaves chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1246110 25129133 AGGGATATAACTCAGCGGTA PT-21842 Oryza sativa tRF-5 Flag leaves chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1246108 25129133 AGGGATATAACTCAGCGGTA PT-21847 Oryza sativa tRF-5 rice seed chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM693280 21791435 AGGGATATAACTCAGCGGTA PT-21850 Oryza sativa tRF-5 seedling, salt chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816692 22158467 AGGGATATAACTCAGCGGTA PT-21852 Oryza sativa tRF-5 young panicles (4cm) chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM648141 22443269 AGGGATATAACTCAGCGGTA PT-21862 Oryza sativa tRF-5 Undifferentiated calli chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM686039 21525786 AGGGATATAACTCAGCGGTA PT-21863 Oryza sativa tRF-5 seedling, control chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816687 22158467 AGGGATATAACTCAGCGGTA PT-21867 Oryza sativa tRF-5 Flag leaves chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1246109 25129133 AGGGATATAACTCAGCGGTA PT-21885 Oryza sativa tRF-5 seedling, drought chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816690 22158467 AGGGATATAACTCAGCGGTA PT-21892 Oryza sativa tRF-5 Differentiated calli chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM686040 21525786 AGGGATATAACTCAGCGGTA PT-21909 Oryza sativa tRF-5 inflorescences chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM647194 22862743 AGGGATATAACTCAGCGGTAG PT-21929 Oryza sativa tRF-5 shoot, nitrogen-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816725 22158467 AGGGATATAACTCAGCGGTAGA PT-21936 Oryza sativa Japonica Group tRF-5 MDJ8 leaves before treatment as control, biological replicate 1 chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695932 26335702 AGGGATATAACTCAGCGGTAGA PT-21954 Oryza sativa tRF-5 root, nitrogen-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816711 22158467 AGGGATATAACTCAGCGGTAGA PT-21955 Oryza sativa tRF-5 panicle, control chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816732 22158467 AGGGATATAACTCAGCGGTAGA PT-21977 Oryza sativa tRF-5 panicle, cold chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816740 22158467 AGGGATATAACTCAGCGGTAGA PT-21980 Oryza sativa tRF-5 Panicle chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288569 26471296 AGGGATATAACTCAGCGGTAGA PT-21981 Oryza sativa tRF-5 seedling, cold + salt chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816697 22158467 AGGGATATAACTCAGCGGTAGA PT-21982 Oryza sativa tRF-5 root, potassium-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816713 22158467 AGGGATATAACTCAGCGGTAGA PT-21988 Oryza sativa tRF-5 Panicle chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288579 26471296 AGGGATATAACTCAGCGGTAGA PT-21995 Oryza sativa tRF-5 shoot, potassium-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816727 22158467 AGGGATATAACTCAGCGGTAGA PT-22025 Oryza sativa Japonica Group tRF-5 Rb49 leaves before treatment as control chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695940 26335702 AGGGATATAACTCAGCGGTAGA PT-22034 Oryza sativa tRF-5 shoot, potassium-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816726 22158467 AGGGATATAACTCAGCGGTAGA PT-22053 Oryza sativa tRF-5 panicle, drought chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816734 22158467 AGGGATATAACTCAGCGGTAGA PT-22068 Oryza sativa tRF-5 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288573 26471296 AGGGATATAACTCAGCGGTAGA PT-22076 Oryza sativa tRF-5 panicle, control chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816731 22158467 AGGGATATAACTCAGCGGTAGA PT-22078 Oryza sativa tRF-5 Panicle chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288566 26471296 AGGGATATAACTCAGCGGTAGA PT-22079 Oryza sativa tRF-5 shoot, sulfate-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816723 22158467 AGGGATATAACTCAGCGGTAGA PT-22133 Oryza sativa tRF-5 panicle, OsDCL1 RNAi chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816746 22158467 AGGGATATAACTCAGCGGTAGA PT-22137 Oryza sativa tRF-5 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288576 26471296 AGGGATATAACTCAGCGGTAGA PT-22138 Oryza sativa tRF-5 shoot, phosphate-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816721 22158467 AGGGATATAACTCAGCGGTAGA PT-22147 Oryza sativa tRF-5 shoot, nitrogen-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816724 22158467 AGGGATATAACTCAGCGGTAGA PT-22152 Oryza sativa tRF-5 root, phosphate-deficient medium chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816707 22158467 AGGGATATAACTCAGCGGTAGA PT-22153 Oryza sativa tRF-5 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288577 26471296 AGGGATATAACTCAGCGGTAGA PT-22156 Oryza sativa tRF-5 Panicle chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288567 26471296 AGGGATATAACTCAGCGGTAGA PT-22158 Oryza sativa tRF-5 shoot, potassium-deficient medium +salt chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816728 22158467 AGGGATATAACTCAGCGGTAGA PT-22178 Oryza sativa tRF-5 seedling, cold chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816695 22158467 AGGGATATAACTCAGCGGTAGA PT-22184 Oryza sativa tRF-5 panicle, salt chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816738 22158467 AGGGATATAACTCAGCGGTAGA PT-22207 Oryza sativa tRF-5 panicle, salt chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816737 22158467 AGGGATATAACTCAGCGGTAGA PT-22208 Oryza sativa tRF-5 panicle, drought chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816735 22158467 AGGGATATAACTCAGCGGTAGA PT-22209 Oryza sativa tRF-5 shoot, potassium-deficient medium+salt chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816729 22158467 AGGGATATAACTCAGCGGTAGA PT-22213 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 24 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695938 26335702 AGGGATATAACTCAGCGGTAGA PT-22260 Oryza sativa tRF-5 seedling, OsDCL1 RNAi chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816701 22158467 AGGGATATAACTCAGCGGTAGA PT-22266 Oryza sativa tRF-5 seedling, control chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816689 22158467 AGGGATATAACTCAGCGGTAGA PT-22279 Oryza sativa tRF-5 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288575 26471296 AGGGATATAACTCAGCGGTAGA PT-22297 Oryza sativa tRF-5 seedling, salt chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816693 22158467 AGGGATATAACTCAGCGGTAGA PT-22298 Oryza sativa tRF-5 seedling, OsDCL1 RNAi chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM816703 22158467 AGGGATATAACTCAGCGGTAGA PT-22313 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 4 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695934 26335702 AGGGATATAACTCAGCGGTAGAG PT-22314 Oryza sativa tRF-5 rice seed chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1900090 26681181 AGGGATATAACTCAGCGGTAGAG PT-22319 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 2 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695941 26335702 AGGGATATAACTCAGCGGTAGAG PT-22323 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 24 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695946 26335702 AGGGATATAACTCAGCGGTAGAG PT-22324 Oryza sativa Japonica Group tRF-5 MDJ8 leaves before treatment as control, biological replicate 2 chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695939 26335702 AGGGATATAACTCAGCGGTAGAG PT-22344 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 2 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695944 26335702 AGGGATATAACTCAGCGGTAGAG PT-22347 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 4 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695945 26335702 AGGGATATAACTCAGCGGTAGAG PT-22361 Oryza sativa tRF-5 LYP9 rice chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1522109 25479006 AGGGATATAACTCAGCGGTAGAGT PT-22366 Oryza sativa tRF-5 DCL1IR-2 seedling chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM520637 20381393,27681945 AGGGATATAACTCAGCGGTAGAGT PT-22376 Oryza sativa tRF-5 dcl3a-17 seedling chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM520638 20381393,27681945 AGGGATATAACTCAGCGGTAGAGT PT-22377 Oryza sativa tRF-5 N2Y6 rice chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1522106 25479006 AGGGATATAACTCAGCGGTAGAGT PT-22378 Oryza sativa tRF-5 inflorescences chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM647192 22862743 AGGGATATAACTCAGCGGTAGAGT PT-22379 Oryza sativa tRF-5 inflorescences chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM647193 22862743 AGGGATATAACTCAGCGGTAGAGT PT-22385 Oryza sativa tRF-5 N2Y6 rice chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1522105 25479006 AGGGATATAACTCAGCGGTAGAGT PT-22390 Oryza sativa tRF-5 rdr2-2 seedling chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM520639 20381393,27681945 AGGGATATAACTCAGCGGTAGAGT PT-22391 Oryza sativa tRF-5 Wild type seedling chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM520640 20381393,27681945 AGGGATATAACTCAGCGGTAGAGT PT-22401 Oryza sativa tRF-5 the fourth leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1525455 AGGGATATAACTCAGCGGTAGAGT PT-22417 Oryza sativa tRF-5 N2Y6 rice chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1522107 25479006 AGGGATATAACTCAGCGGTAGAGTG PT-22434 Oryza sativa Japonica Group tRF-5 Control Leaves chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM761761 23627500 AGGGATATAACTCAGCGGTAGAGTGTC PT-22435 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 4 hours post mock treatment, technical replicate 1 chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695942 26335702 AGGGATATAACTCAGCGGTAGAGTGTC PT-22437 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 2 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695936 26335702 AGGGATATAACTCAGCGGTAGAGTGTC PT-22438 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 24 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695935 26335702 AGGGATATAACTCAGCGGTAGAGTGTC PT-22440 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 24 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695943 26335702 AGGGATATAACTCAGCGGTAGAGTGTC PT-22441 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 2 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695933 26335702 AGGGATATAACTCAGCGGTAGAGTGTC PT-22454 Oryza sativa tRF-5 Wild type seedling chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM520636 20381393,27681945 AGGGATATAACTCAGCGGTAGAGTGTC PT-22457 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 4 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695937 26335702 AGGGATATAACTCAGCGGTAGAGTGTC PT-22466 Oryza sativa tRF-5 Panicle chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288571 26471296 AGGGATATAACTCAGCGGTAGAGTGTC PT-22469 Oryza sativa tRF-5 Seedling chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM455965 19903869 AGGGATATAACTCAGCGGTAGAGTGTC PT-22487 Oryza sativa tRF-5 Wild type seedling chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM520635 20381393,27681945 AGGGATATAACTCAGCGGTAGAGTGTC PT-25974 Oryza sativa tRF-3 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288577 26471296 AGTTCGAGCCTGATTATCCCTACCA PT-25977 Oryza sativa Japonica Group tRF-3 Osaba1-1 rice leaves chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1547540 26233894 AGTTCGAGCCTGATTATCCCTACCA PT-29617 Oryza sativa Indica Group tRF-3 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049383 27150822 ATCAGTTCGAGCCTGATTATCCCTACCA PT-29618 Oryza sativa Indica Group tRF-3 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049381 27150822 ATCAGTTCGAGCCTGATTATCCCTACCA PT-29619 Oryza sativa Indica Group tRF-3 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049377 27150822 ATCAGTTCGAGCCTGATTATCCCTACCA PT-66266 Oryza sativa tRF-3 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288573 26471296 CAGTTCGAGCCTGATTATCCCTACCA PT-118395 Oryza sativa tRF-3 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288572 26471296 CGAGCCTGATTATCCCTACCA PT-118400 Oryza sativa Japonica Group tRF-3 Rb49 leaves with 2 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695941 26335702 CGAGCCTGATTATCCCTACCA PT-118401 Oryza sativa Japonica Group tRF-3 MDJ8 leaves with 2 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695933 26335702 CGAGCCTGATTATCCCTACCA PT-118402 Oryza sativa Japonica Group tRF-3 Rb49 leaves before treatment as control chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695940 26335702 CGAGCCTGATTATCCCTACCA PT-118403 Oryza sativa tRF-3 Panicle chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288566 26471296 CGAGCCTGATTATCCCTACCA PT-118408 Oryza sativa tRF-3 Panicle chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288567 26471296 CGAGCCTGATTATCCCTACCA PT-118428 Oryza sativa tRF-3 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288576 26471296 CGAGCCTGATTATCCCTACCA PT-118443 Oryza sativa Japonica Group tRF-3 Rb49 leaves with 24 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695943 26335702 CGAGCCTGATTATCCCTACCA PT-118445 Oryza sativa tRF-3 Flag Leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1288574 26471296 CGAGCCTGATTATCCCTACCA PT-118447 Oryza sativa Japonica Group tRF-3 Rb49 leaves with 4 hours post mock treatment, technical replicate 2 chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695947 26335702 CGAGCCTGATTATCCCTACCA PT-118450 Oryza sativa Japonica Group tRF-3 MDJ8 leaves with 24 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695938 26335702 CGAGCCTGATTATCCCTACCA PT-118451 Oryza sativa Japonica Group tRF-3 MDJ8 leaves with 24 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695935 26335702 CGAGCCTGATTATCCCTACCA PT-118452 Oryza sativa Japonica Group tRF-3 MDJ8 leaves before treatment as control, biological replicate 2 chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695939 26335702 CGAGCCTGATTATCCCTACCA PT-118453 Oryza sativa Japonica Group tRF-3 Rb49 leaves with 2 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695944 26335702 CGAGCCTGATTATCCCTACCA PT-118454 Oryza sativa Japonica Group tRF-3 MDJ8 leaves with 4 hours post mock treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695934 26335702 CGAGCCTGATTATCCCTACCA PT-118462 Oryza sativa Japonica Group tRF-3 Rb49 leaves with 4 hours post mock treatment, technical replicate 1 chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695942 26335702 CGAGCCTGATTATCCCTACCA PT-118466 Oryza sativa Japonica Group tRF-3 Rb49 leaves with 4 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695945 26335702 CGAGCCTGATTATCCCTACCA PT-118467 Oryza sativa Japonica Group tRF-3 MDJ8 leaves before treatment as control, biological replicate 1 chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695932 26335702 CGAGCCTGATTATCCCTACCA PT-118468 Oryza sativa Japonica Group tRF-3 MDJ8 leaves with 2 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695936 26335702 CGAGCCTGATTATCCCTACCA PT-118469 Oryza sativa Japonica Group tRF-3 MDJ8 leaves with 4 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695937 26335702 CGAGCCTGATTATCCCTACCA PT-118470 Oryza sativa Japonica Group tRF-3 Rb49 leaves with 24 hours post PXO61 treatment chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1695946 26335702 CGAGCCTGATTATCCCTACCA PT-118476 Oryza sativa Indica Group tRF-3 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049378 27150822 CGAGCCTGATTATCCCTACCA PT-208459 Oryza sativa tRF-3 the fourth leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1525455 GCCTGATTATCCCTACCA PT-208460 Oryza sativa tRF-3 N2Y6 rice chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM1522107 25479006 GCCTGATTATCCCTACCA PT-340612 Oryza sativa Japonica Group tRF-5 shoot chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM898992 22537016 GTCCTCGAGTGCAAAGGC PT-340613 Oryza sativa Japonica Group tRF-5 shoot chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM898989 22537016 GTCCTCGAGTGCAAAGGCA PT-340614 Oryza sativa tRF-5 dcl3a-17 seedling chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM520638 20381393,27681945 GTCCTCGAGTGCAAAGGCAGA PT-340615 Oryza sativa Japonica Group tRF-5 shoot chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM898990 22537016 GTCCTCGAGTGCAAAGGCAGA PT-340616 Oryza sativa tRF-5 Wild type seedling chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM520640 20381393,27681945 GTCCTCGAGTGCAAAGGCAGA PT-340617 Oryza sativa tRF-5 rdr2-2 seedling chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM520639 20381393,27681945 GTCCTCGAGTGCAAAGGCAGA PT-340618 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 4 hours post mock treatment, technical replicate 1 chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695942 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340619 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 4 hours post PXO61 treatment chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695937 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340620 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 2 hours post mock treatment chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695941 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340621 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 4 hours post mock treatment chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695934 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340622 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 2 hours post PXO61 treatment chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695944 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340623 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 24 hours post mock treatment chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695943 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340624 Oryza sativa Japonica Group tRF-5 MDJ8 leaves before treatment as control, biological replicate 1 chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695932 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340625 Oryza sativa Japonica Group tRF-5 MDJ8 leaves before treatment as control, biological replicate 2 chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695939 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340626 Oryza sativa Japonica Group tRF-5 Rb49 leaves with 24 hours post PXO61 treatment chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695946 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340627 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 2 hours post PXO61 treatment chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695936 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340628 Oryza sativa tRF-5 Flag Leaf chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1288573 26471296 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340629 Oryza sativa Japonica Group tRF-5 MDJ8 leaves with 2 hours post mock treatment chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695933 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-340630 Oryza sativa Japonica Group tRF-5 Rb49 leaves before treatment as control chr8:9245995-9246066 chr8.trna47-ValGAC ValGAC GSM1695940 26335702 GTCCTCGAGTGCAAAGGCAGAAGGG PT-403882 Oryza sativa Indica Group tRF-3 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049384 27150822 TCAGTTCGAGCCTGATTATCCCTACCA PT-403883 Oryza sativa Indica Group tRF-3 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049380 27150822 TCAGTTCGAGCCTGATTATCCCTACCA PT-403884 Oryza sativa Indica Group tRF-3 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049382 27150822 TCAGTTCGAGCCTGATTATCCCTACCA PT-403885 Oryza sativa Indica Group tRF-3 fully expanded third leaf chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM2049379 27150822 TCAGTTCGAGCCTGATTATCCCTACCA PT-442287 Oryza sativa tRF-3 inflorescences chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM647193 22862743 TCGAGCCTGATTATCCCTACCA PT-472819 Oryza sativa tRF-3 inflorescences chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM647195 22862743 TTCGAGCCTGATTATCCCTACCA PT-472830 Oryza sativa tRF-3 inflorescences chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM647192 22862743 TTCGAGCCTGATTATCCCTACCA PT-472844 Oryza sativa tRF-3 inflorescences chr2:812459-812530 chr2.trna77-ValGAC ValGAC GSM647194 22862743 TTCGAGCCTGATTATCCCTACCA