PtRF Id Plant Name tRF Type Tissue Gene Coordinates tRNA Name Anticodon GSM Number PMID Sequence PT-5452 Physcomitrella patens tRF-3 7 day protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM115095 17601824,17081978 AACCCGCAGGGACTACCA PT-11534 Physcomitrella patens tRF-3 14 day old P. patens scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM115096 17601824,17081978 ACCCGCAGGGACTACCA PT-102531 Physcomitrella patens tRF-3 14 day old P. patens scaffold109:27214-27287 scaffold_109.trna1-ValCAC ValCAC GSM115096 17601824,17081978 CCGCGATCAGACACCA PT-102532 Physcomitrella patens tRF-3 14 day old P. patens scaffold303:450272-450345 scaffold_303.trna1-ValCAC ValCAC GSM115096 17601824,17081978 CCGCGATCAGACACCA PT-109917 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313215 19096705 CGAAACCCGCAGGGACTACCA PT-109920 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313212 19096705,27681945 CGAAACCCGCAGGGACTACCA PT-109923 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313213 19096705 CGAAACCCGCAGGGACTACCA PT-109926 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313217 19096705 CGAAACCCGCAGGGACTACCA PT-109929 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313214 19096705 CGAAACCCGCAGGGACTACCA PT-109932 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313216 19096705 CGAAACCCGCAGGGACTACCA PT-110449 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold109:27214-27287 scaffold_109.trna1-ValCAC ValCAC GSM313215 19096705 CGAACCCGCGATCAGACACCA PT-110450 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold303:450272-450345 scaffold_303.trna1-ValCAC ValCAC GSM313215 19096705 CGAACCCGCGATCAGACACCA PT-110451 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold109:27214-27287 scaffold_109.trna1-ValCAC ValCAC GSM313213 19096705 CGAACCCGCGATCAGACACCA PT-110452 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold303:450272-450345 scaffold_303.trna1-ValCAC ValCAC GSM313213 19096705 CGAACCCGCGATCAGACACCA PT-110453 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold109:27214-27287 scaffold_109.trna1-ValCAC ValCAC GSM313212 19096705,27681945 CGAACCCGCGATCAGACACCA PT-110454 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold109:27214-27287 scaffold_109.trna1-ValCAC ValCAC GSM313216 19096705 CGAACCCGCGATCAGACACCA PT-110455 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold303:450272-450345 scaffold_303.trna1-ValCAC ValCAC GSM313212 19096705,27681945 CGAACCCGCGATCAGACACCA PT-110456 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold303:450272-450345 scaffold_303.trna1-ValCAC ValCAC GSM313216 19096705 CGAACCCGCGATCAGACACCA PT-110457 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold109:27214-27287 scaffold_109.trna1-ValCAC ValCAC GSM313217 19096705 CGAACCCGCGATCAGACACCA PT-110458 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold303:450272-450345 scaffold_303.trna1-ValCAC ValCAC GSM313217 19096705 CGAACCCGCGATCAGACACCA PT-111801 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM313212 19096705,27681945 CGAACCTGGGATCAGACACCA PT-111802 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM313212 19096705,27681945 CGAACCTGGGATCAGACACCA PT-111803 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM313212 19096705,27681945 CGAACCTGGGATCAGACACCA PT-111804 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold70:1341425-1341498 scaffold_70.trna1-ValCAC ValCAC GSM313212 19096705,27681945 CGAACCTGGGATCAGACACCA PT-111805 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM313215 19096705 CGAACCTGGGATCAGACACCA PT-111806 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM313215 19096705 CGAACCTGGGATCAGACACCA PT-111807 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM313215 19096705 CGAACCTGGGATCAGACACCA PT-111808 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-10 Protonemata scaffold70:1341425-1341498 scaffold_70.trna1-ValCAC ValCAC GSM313215 19096705 CGAACCTGGGATCAGACACCA PT-153615 Physcomitrella patens tRF-3 7 day protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM115095 17601824,17081978 CTGGGATCAGACACCA PT-153616 Physcomitrella patens tRF-3 7 day protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM115095 17601824,17081978 CTGGGATCAGACACCA PT-153617 Physcomitrella patens tRF-3 7 day protonemata scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM115095 17601824,17081978 CTGGGATCAGACACCA PT-153618 Physcomitrella patens tRF-3 7 day protonemata scaffold70:1341425-1341498 scaffold_70.trna1-ValCAC ValCAC GSM115095 17601824,17081978 CTGGGATCAGACACCA PT-153619 Physcomitrella patens tRF-3 14 day old P. patens scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM115096 17601824,17081978 CTGGGATCAGACACCA PT-153620 Physcomitrella patens tRF-3 14 day old P. patens scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM115096 17601824,17081978 CTGGGATCAGACACCA PT-153621 Physcomitrella patens tRF-3 14 day old P. patens scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM115096 17601824,17081978 CTGGGATCAGACACCA PT-153622 Physcomitrella patens tRF-3 14 day old P. patens scaffold70:1341425-1341498 scaffold_70.trna1-ValCAC ValCAC GSM115096 17601824,17081978 CTGGGATCAGACACCA PT-153623 Physcomitrella patens tRF-3 14 day old P. patens scaffold33:2392662-2392735 scaffold_33.trna4-ValCAC ValCAC GSM115096 17601824,17081978 CTGGGATTAGACACCA PT-153624 Physcomitrella patens tRF-3 14 day old P. patens scaffold33:2418725-2418798 scaffold_33.trna5-ValCAC ValCAC GSM115096 17601824,17081978 CTGGGATTAGACACCA PT-319169 Physcomitrella patens tRF-5 14 day old P. patens scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM115096 17601824,17081978 GGTTCCTTAGTGTAGTGG PT-319172 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313212 19096705,27681945 GGTTCCTTAGTGTAGTGGT PT-319175 Physcomitrella patens tRF-5 Physcomitrella patens 10day Wild-Type Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313213 19096705 GGTTCCTTAGTGTAGTGGTT PT-319178 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313216 19096705 GGTTCCTTAGTGTAGTGGTTATC PT-319181 Physcomitrella patens tRF-5 Physcomitrella patens 10day rdr6-19 Protonemata scaffold307:434087-434159 scaffold_307.trna1-ValCAC ValCAC GSM313217 19096705 GGTTCCTTAGTGTAGTGGTTATC PT-364200 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold109:27214-27287 scaffold_109.trna1-ValCAC ValCAC GSM313215 19096705 GTCTGGTTGGTGTAGTAGG PT-364201 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold144:797737-797810 scaffold_144.trna1-ValCAC ValCAC GSM313215 19096705 GTCTGGTTGGTGTAGTCGG PT-364202 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM313215 19096705 GTCTGGTTGGTGTAGTCGG PT-364203 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM313215 19096705 GTCTGGTTGGTGTAGTCGG PT-364204 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold33:2392662-2392735 scaffold_33.trna4-ValCAC ValCAC GSM313215 19096705 GTCTGGTTGGTGTAGTCGG PT-364205 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-10 Protonemata scaffold33:2418725-2418798 scaffold_33.trna5-ValCAC ValCAC GSM313215 19096705 GTCTGGTTGGTGTAGTCGG PT-364206 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold144:797737-797810 scaffold_144.trna1-ValCAC ValCAC GSM313214 19096705 GTCTGGTTGGTGTAGTCGG PT-364207 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM313214 19096705 GTCTGGTTGGTGTAGTCGG PT-364208 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM313214 19096705 GTCTGGTTGGTGTAGTCGG PT-364209 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold33:2392662-2392735 scaffold_33.trna4-ValCAC ValCAC GSM313214 19096705 GTCTGGTTGGTGTAGTCGG PT-364210 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold33:2418725-2418798 scaffold_33.trna5-ValCAC ValCAC GSM313214 19096705 GTCTGGTTGGTGTAGTCGG PT-364211 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold303:450272-450345 scaffold_303.trna1-ValCAC ValCAC GSM313214 19096705 GTCTGGTTGGTGTAGTTGG PT-364212 Physcomitrella patens tRF-5 Physcomitrella patens 10day dcl3-5 Protonemata scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM313214 19096705 GTCTGGTTGGTGTAGTTGG PT-384787 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM313217 19096705 GTTCGAACCTGGGATCAGACACCA PT-384788 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM313217 19096705 GTTCGAACCTGGGATCAGACACCA PT-384789 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM313217 19096705 GTTCGAACCTGGGATCAGACACCA PT-384790 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold70:1341425-1341498 scaffold_70.trna1-ValCAC ValCAC GSM313217 19096705 GTTCGAACCTGGGATCAGACACCA PT-384791 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM313214 19096705 GTTCGAACCTGGGATCAGACACCA PT-384792 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM313214 19096705 GTTCGAACCTGGGATCAGACACCA PT-384793 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM313214 19096705 GTTCGAACCTGGGATCAGACACCA PT-384794 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold70:1341425-1341498 scaffold_70.trna1-ValCAC ValCAC GSM313214 19096705 GTTCGAACCTGGGATCAGACACCA PT-384795 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM313216 19096705 GTTCGAACCTGGGATCAGACACCA PT-384796 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM313216 19096705 GTTCGAACCTGGGATCAGACACCA PT-384797 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM313216 19096705 GTTCGAACCTGGGATCAGACACCA PT-384798 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold70:1341425-1341498 scaffold_70.trna1-ValCAC ValCAC GSM313216 19096705 GTTCGAACCTGGGATCAGACACCA PT-438537 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold109:27214-27287 scaffold_109.trna1-ValCAC ValCAC GSM313214 19096705 TCGAACCCGCGATCAGACACCA PT-438538 Physcomitrella patens tRF-3 Physcomitrella patens 10day dcl3-5 Protonemata scaffold303:450272-450345 scaffold_303.trna1-ValCAC ValCAC GSM313214 19096705 TCGAACCCGCGATCAGACACCA PT-438539 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold109:27214-27287 scaffold_109.trna1-ValCAC ValCAC GSM313216 19096705 TCGAACCCGCGATCAGACACCA PT-438540 Physcomitrella patens tRF-3 Physcomitrella patens 10day rdr6-19 Protonemata scaffold303:450272-450345 scaffold_303.trna1-ValCAC ValCAC GSM313216 19096705 TCGAACCCGCGATCAGACACCA PT-439774 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM313212 19096705,27681945 TCGAACCTGGGATCAGACACCA PT-439775 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM313212 19096705,27681945 TCGAACCTGGGATCAGACACCA PT-439776 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM313212 19096705,27681945 TCGAACCTGGGATCAGACACCA PT-439777 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold70:1341425-1341498 scaffold_70.trna1-ValCAC ValCAC GSM313212 19096705,27681945 TCGAACCTGGGATCAGACACCA PT-439778 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold27:484563-484636 scaffold_27.trna1-ValCAC ValCAC GSM313213 19096705 TCGAACCTGGGATCAGACACCA PT-439779 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold27:533664-533737 scaffold_27.trna4-ValCAC ValCAC GSM313213 19096705 TCGAACCTGGGATCAGACACCA PT-439780 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold69:1756771-1756844 scaffold_69.trna3-ValCAC ValCAC GSM313213 19096705 TCGAACCTGGGATCAGACACCA PT-439781 Physcomitrella patens tRF-3 Physcomitrella patens 10day Wild-Type Protonemata scaffold70:1341425-1341498 scaffold_70.trna1-ValCAC ValCAC GSM313213 19096705 TCGAACCTGGGATCAGACACCA