DSSP OUTPUT
==== Secondary Structure Definition by the program DSSP, CMBI version 3.0.1 ==== DATE=2019-06-21 .
REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 .
HEADER PLANT PROTEIN 15-FEB-05 1YV8 .
COMPND MOL_ID: 1; MOLECULE: CRAMBIN; CHAIN: A; ENGINEERED: YES .
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: CRAMBE HISPANICA; ORGANISM_TAXID: 3721 .
AUTHOR H.-C.AHN,J.L.MARKLEY .
45 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) .
3149.4 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) .
25 55.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES .
2 4.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES .
3 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES .
4 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES .
14 31.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES .
2 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES .
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** .
0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX .
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER .
1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER .
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET .
# RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA CHAIN AUTHCHAIN
1 2 A T 0 0 45 0, 0.0 2,-0.4 0, 0.0 32,-0.2 0.000 360.0 360.0 360.0 149.8 -3.5 -3.2 1.5 A A
2 3 A a B -A 32 0A 0 30,-1.4 30,-1.5 43,-0.1 42,-0.2 -0.979 360.0-175.7-134.5 125.0 -1.1 -5.4 -0.4 A A
3 4 A b - 0 0 0 -2,-0.4 28,-0.2 28,-0.2 42,-0.2 -0.933 16.3-151.1-123.1 146.8 2.0 -4.2 -2.3 A A
4 5 A P S S+ 0 0 35 0, 0.0 -1,-0.2 0, 0.0 5,-0.1 0.915 80.1 50.3 -75.8 -94.3 4.5 -6.1 -4.4 A A
5 6 A S S >> S- 0 0 69 1,-0.1 4,-1.3 25,-0.1 3,-0.5 -0.212 82.1-134.4 -48.2 123.2 8.0 -4.5 -4.3 A A
6 7 A I H >> S+ 0 0 113 1,-0.3 4,-2.2 2,-0.2 3,-1.3 0.950 105.4 57.4 -47.7 -54.8 8.8 -4.1 -0.6 A A
7 8 A V H 3> S+ 0 0 97 1,-0.3 4,-2.0 2,-0.2 5,-0.3 0.911 99.3 60.4 -44.3 -45.9 10.1 -0.5 -1.2 A A
8 9 A A H <> S+ 0 0 13 -3,-0.5 4,-1.7 1,-0.2 -1,-0.3 0.919 108.2 44.3 -50.7 -42.9 6.6 0.3 -2.6 A A
9 10 A R H < S+ 0 0 89 -4,-1.2 3,-0.7 -5,-0.4 -2,-0.2 0.900 112.0 49.8 -82.5 -42.7 5.1 6.5 5.2 A A
15 16 A c H 3< S+ 0 0 31 -4,-4.1 -2,-0.2 1,-0.2 -3,-0.2 0.800 112.5 50.0 -66.7 -24.3 2.7 8.3 2.9 A A
16 17 A R T 3< S+ 0 0 109 -4,-0.9 4,-0.4 -5,-0.4 -1,-0.2 0.630 89.3 83.1 -88.1 -12.5 -0.2 7.0 5.2 A A
17 18 A L S < S+ 0 0 142 -3,-0.7 -1,-0.2 -4,-0.3 -2,-0.2 0.937 95.3 43.6 -55.0 -46.9 1.7 8.3 8.3 A A
18 19 A P S S- 0 0 74 0, 0.0 2,-1.5 0, 0.0 -3,-0.0 0.175 124.4 -61.2 -80.1-157.3 0.3 11.8 7.8 A A
19 20 A G S S+ 0 0 86 2,-0.0 -2,-0.1 0, 0.0 -3,-0.1 -0.523 88.2 129.5 -90.9 72.6 -3.3 12.6 6.8 A A
20 21 A T - 0 0 23 -2,-1.5 2,-0.2 -4,-0.4 5,-0.0 -0.989 56.9-123.9-130.9 134.1 -3.4 10.7 3.5 A A
21 22 A P >> - 0 0 70 0, 0.0 3,-1.7 0, 0.0 4,-1.6 -0.474 28.6-115.8 -73.0 139.2 -6.0 8.2 2.2 A A
22 23 A E H 3> S+ 0 0 72 1,-0.3 4,-4.1 2,-0.2 5,-0.3 0.831 117.0 63.4 -44.3 -31.6 -4.6 4.8 1.2 A A
23 24 A A H 3> S+ 0 0 54 1,-0.2 4,-1.3 2,-0.2 -1,-0.3 0.924 101.2 48.5 -62.9 -41.8 -5.8 5.8 -2.3 A A
24 25 A L H <> S+ 0 0 107 -3,-1.7 4,-1.3 2,-0.2 -1,-0.2 0.895 123.4 32.8 -66.8 -37.2 -3.4 8.7 -2.5 A A
25 26 A c H X>S+ 0 0 0 -4,-1.6 4,-4.0 2,-0.2 5,-0.6 0.911 108.4 64.7 -85.8 -45.9 -0.4 6.6 -1.4 A A
26 27 A A I X>S+ 0 0 6 -4,-4.1 4,-2.0 -5,-0.3 5,-0.9 0.872 111.3 41.5 -45.3 -36.1 -1.5 3.2 -2.9 A A
27 28 A T I <5S+ 0 0 118 -4,-1.3 -1,-0.2 -5,-0.3 -2,-0.2 0.946 116.6 44.9 -79.1 -49.5 -1.0 5.1 -6.3 A A
28 29 A Y I <5S+ 0 0 207 -4,-1.3 -2,-0.2 -5,-0.2 -1,-0.2 0.820 128.8 31.3 -64.5 -26.6 2.2 6.9 -5.4 A A
29 30 A T I <5S- 0 0 21 -4,-4.0 -3,-0.2 2,-0.1 -2,-0.2 0.878 108.1-117.4 -96.5 -51.4 3.5 3.7 -3.9 A A
30 31 A G I << + 0 0 30 -4,-2.0 -3,-0.2 -5,-0.6 2,-0.2 0.586 64.2 133.6 120.4 22.1 1.9 1.0 -6.0 A A
31 32 A b < - 0 0 8 -5,-0.9 2,-0.3 -6,-0.3 -28,-0.2 -0.535 44.9-133.6 -97.6 168.1 -0.3 -0.9 -3.4 A A
32 33 A I B -A 2 0A 65 -30,-1.5 -30,-1.4 -2,-0.2 2,-0.5 -0.872 11.0-126.8-121.0 155.7 -3.9 -1.9 -3.8 A A
33 34 A I + 0 0 97 -2,-0.3 3,-0.0 -32,-0.2 -10,-0.0 -0.873 28.3 179.6-104.4 125.6 -6.9 -1.6 -1.4 A A
34 35 A I - 0 0 52 -2,-0.5 3,-0.1 1,-0.1 4,-0.1 -0.981 29.8-147.4-128.2 136.9 -8.9 -4.7 -0.6 A A
35 36 A P S S- 0 0 146 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.619 78.4 -48.1 -73.8 -12.8 -11.9 -5.1 1.7 A A
36 37 A G S S+ 0 0 33 2,-0.2 0, 0.0 1,-0.1 0, 0.0 -0.954 89.1 109.3 173.3-154.4 -10.8 -8.6 2.7 A A
37 38 A A S S- 0 0 96 -2,-0.3 -1,-0.1 -3,-0.1 0, 0.0 0.830 83.9-112.2 63.0 28.2 -9.6 -11.9 1.1 A A
38 39 A T - 0 0 118 -3,-0.1 -2,-0.2 -4,-0.1 -36,-0.1 0.098 59.0 -44.1 38.9-159.6 -6.1 -11.1 2.5 A A
39 40 A a - 0 0 38 1,-0.2 5,-0.1 -38,-0.1 -37,-0.0 -0.558 62.6-104.4 -96.5 165.4 -3.5 -10.4 -0.1 A A
40 41 A P - 0 0 66 0, 0.0 -1,-0.2 0, 0.0 4,-0.0 0.240 35.6-102.9 -68.8-161.4 -2.9 -12.2 -3.4 A A
41 42 A G S S+ 0 0 72 2,-0.1 -2,-0.0 1,-0.1 0, 0.0 0.471 117.0 34.2-107.8 -3.8 0.0 -14.7 -3.9 A A
42 43 A D S S+ 0 0 152 1,-0.0 -1,-0.1 0, 0.0 -3,-0.0 0.429 118.4 48.6-126.7 -5.1 2.2 -12.3 -6.0 A A
43 44 A Y S S+ 0 0 95 -39,-0.1 2,-1.3 -38,-0.0 -11,-0.2 0.148 73.1 121.3-120.9 18.8 1.4 -8.9 -4.4 A A
44 45 A A 0 0 48 1,-0.2 -42,-0.1 -42,-0.2 -6,-0.0 -0.653 360.0 360.0 -85.6 93.6 1.8 -9.8 -0.7 A A
45 46 A N 0 0 88 -2,-1.3 -36,-0.3 -42,-0.2 -1,-0.2 0.336 360.0 360.0 179.5 360.0 4.5 -7.4 0.5 A A