DSSP OUTPUT
==== Secondary Structure Definition by the program DSSP, CMBI version 3.0.1 ==== DATE=2019-06-21 .
REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 .
HEADER LIPID TRANSPORT 15-APR-04 1T12 .
COMPND MOL_ID: 1; MOLECULE: NONSPECIFIC LIPID-TRANSFER PROTEIN 1; CHAIN: A; F .
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; ORGANISM_COMMON: CO .
AUTHOR P.DA SILVA,C.LANDON,B.INDUSTRI,M.PONCHET,F.VOVELLE .
91 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) .
5075.9 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) .
68 74.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES .
10 11.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES .
15 16.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES .
38 41.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES .
2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES .
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** .
0 0 0 0 0 0 2 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX .
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER .
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER .
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET .
# RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA CHAIN AUTHCHAIN
1 1 A A 0 0 129 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 158.7 6.6 -16.1 4.0 A A
2 2 A I + 0 0 63 4,-0.0 2,-0.3 3,-0.0 3,-0.1 -0.553 360.0 168.8 -77.8 142.9 4.8 -12.9 3.0 A A
3 3 A T >> - 0 0 77 -2,-0.2 4,-1.7 1,-0.1 3,-1.1 -0.977 46.7-124.6-155.3 142.7 2.6 -11.3 5.8 A A
4 4 A a H 3> S+ 0 0 47 -2,-0.3 4,-3.5 1,-0.2 5,-0.3 0.858 108.9 67.5 -55.1 -35.8 0.7 -8.0 6.4 A A
5 5 A G H 3> S+ 0 0 44 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.875 104.3 42.3 -48.6 -43.9 2.8 -7.6 9.6 A A
6 6 A Q H <> S+ 0 0 106 -3,-1.1 4,-1.4 2,-0.2 3,-0.3 0.922 115.6 50.0 -70.1 -42.9 5.9 -7.1 7.5 A A
7 7 A V H X S+ 0 0 6 -4,-1.7 4,-1.4 1,-0.2 3,-0.3 0.947 108.2 51.0 -63.6 -48.7 4.1 -4.8 5.0 A A
8 8 A T H < S+ 0 0 49 -4,-3.5 4,-0.3 1,-0.2 -1,-0.2 0.759 101.4 63.9 -63.1 -21.8 2.6 -2.6 7.7 A A
9 9 A S H >< S+ 0 0 83 -4,-1.0 3,-2.0 -3,-0.3 -1,-0.2 0.970 104.2 45.6 -64.4 -49.5 6.0 -2.1 9.3 A A
10 10 A N H 3< S+ 0 0 56 -4,-1.4 4,-0.3 -3,-0.3 -1,-0.2 0.822 105.6 62.7 -60.8 -30.3 7.2 -0.4 6.1 A A
11 11 A L T >X + 0 0 1 -4,-1.4 4,-2.9 1,-0.2 3,-0.7 0.555 68.5 111.2 -70.9 -4.7 4.0 1.7 6.0 A A
12 12 A A H <> S+ 0 0 63 -3,-2.0 4,-0.9 -4,-0.3 -1,-0.2 0.826 86.0 36.4 -40.7 -49.5 4.9 3.4 9.4 A A
13 13 A P H 3> S+ 0 0 36 0, 0.0 4,-1.8 0, 0.0 -1,-0.3 0.855 117.9 52.6 -72.9 -30.4 5.5 6.8 7.6 A A
14 14 A b H <> S+ 0 0 0 -3,-0.7 4,-3.5 -4,-0.3 5,-0.3 0.966 98.9 62.3 -66.6 -50.6 2.6 6.2 5.2 A A
15 15 A L H X S+ 0 0 45 -4,-2.9 4,-1.1 1,-0.3 -1,-0.2 0.849 107.3 46.2 -42.4 -41.3 0.1 5.4 7.9 A A
16 16 A A H ><>S+ 0 0 32 -4,-0.9 5,-1.3 -5,-0.3 6,-1.0 0.954 113.9 46.8 -69.4 -47.3 0.7 9.0 9.2 A A
17 17 A Y H ><5S+ 0 0 26 -4,-1.8 3,-2.4 6,-0.3 -2,-0.2 0.884 104.9 61.8 -58.1 -39.2 0.4 10.5 5.6 A A
18 18 A L H 3<5S+ 0 0 4 -4,-3.5 44,-2.9 1,-0.3 48,-0.2 0.867 101.9 52.1 -56.9 -36.1 -2.8 8.4 5.0 A A
19 19 A R T <<5S- 0 0 126 -4,-1.1 -1,-0.3 -3,-0.6 -2,-0.2 0.297 113.4-119.6 -81.6 11.2 -4.5 10.2 7.9 A A
20 20 A N T < 5S+ 0 0 107 -3,-2.4 -3,-0.2 42,-0.1 -2,-0.1 0.932 92.6 88.0 49.6 49.3 -3.5 13.7 6.4 A A
21 21 A T S + 0 0 47 1,-0.2 3,-2.1 -8,-0.1 -7,-0.1 0.922 57.0 155.2 -62.2 -44.4 5.4 11.2 4.1 A A
25 25 A G T 3 S- 0 0 67 1,-0.3 3,-0.5 2,-0.1 4,-0.3 -0.344 79.2 -4.0 53.9-120.0 9.0 11.1 5.3 A A
26 26 A R T 3> S+ 0 0 209 1,-0.2 4,-3.2 -3,-0.1 -1,-0.3 0.120 102.2 111.5 -89.6 23.4 10.2 7.5 4.3 A A
27 27 A b H <> S+ 0 0 0 -3,-2.1 4,-3.1 2,-0.2 5,-0.2 0.956 81.5 46.2 -60.6 -46.9 6.7 6.5 3.0 A A
28 28 A c H > S+ 0 0 52 -3,-0.5 4,-3.6 2,-0.2 -1,-0.2 0.943 113.9 48.0 -60.7 -46.0 8.1 6.4 -0.6 A A
29 29 A G H > S+ 0 0 49 -4,-0.3 4,-2.0 2,-0.2 -2,-0.2 0.930 113.6 47.9 -59.7 -44.5 11.2 4.5 0.5 A A
30 30 A G H X S+ 0 0 13 -4,-3.2 4,-2.1 2,-0.2 3,-0.3 0.966 115.9 43.1 -58.5 -52.0 9.1 2.0 2.5 A A
31 31 A V H X S+ 0 0 3 -4,-3.1 4,-2.9 1,-0.2 -2,-0.2 0.955 107.7 60.0 -61.7 -48.5 6.6 1.5 -0.4 A A
32 32 A K H X S+ 0 0 133 -4,-3.6 4,-1.0 1,-0.2 -1,-0.2 0.878 107.8 46.7 -42.1 -45.8 9.5 1.3 -2.9 A A
33 33 A A H >X S+ 0 0 47 -4,-2.0 4,-1.3 -3,-0.3 3,-0.7 0.952 110.4 51.8 -63.4 -47.5 10.8 -1.7 -0.9 A A
34 34 A L H >< S+ 0 0 13 -4,-2.1 3,-0.5 1,-0.2 -2,-0.2 0.923 97.4 67.6 -55.2 -47.0 7.3 -3.3 -0.8 A A
35 35 A V H >< S+ 0 0 15 -4,-2.9 3,-2.3 1,-0.3 -1,-0.2 0.857 99.5 50.5 -39.6 -49.0 7.0 -2.9 -4.6 A A
36 36 A N H X< S+ 0 0 123 -4,-1.0 3,-0.8 -3,-0.7 4,-0.3 0.938 113.9 43.9 -61.7 -42.6 9.7 -5.5 -5.0 A A
37 37 A S T << S+ 0 0 47 -4,-1.3 -1,-0.3 -3,-0.5 10,-0.2 -0.056 112.1 60.9 -84.3 33.6 7.8 -7.8 -2.6 A A
38 38 A A T < S+ 0 0 0 -3,-2.3 -1,-0.2 -5,-0.1 -2,-0.2 0.042 88.3 65.4-145.1 33.2 4.7 -6.7 -4.6 A A
39 39 A R < + 0 0 112 -3,-0.8 2,-1.5 -5,-0.1 -2,-0.1 0.576 67.2 88.5-129.6 -14.9 5.3 -8.0 -8.2 A A
40 40 A T S > S- 0 0 96 -4,-0.3 2,-3.3 1,-0.1 3,-0.7 -0.169 99.9-111.0 -77.8 47.3 5.4 -11.9 -8.2 A A
41 41 A T T 3> S+ 0 0 65 -2,-1.5 4,-1.4 1,-0.3 -1,-0.1 -0.208 113.0 41.1 62.8 -62.3 1.5 -12.0 -8.7 A A
42 42 A E H 3> S+ 0 0 137 -2,-3.3 4,-2.9 2,-0.2 -1,-0.3 0.946 110.6 54.2 -84.5 -50.9 0.8 -13.4 -5.2 A A
43 43 A D H <> S+ 0 0 41 -3,-0.7 4,-2.6 1,-0.3 5,-0.2 0.929 110.8 51.8 -42.4 -49.0 3.3 -11.2 -3.2 A A
44 44 A R H > S+ 0 0 13 1,-0.2 4,-3.0 2,-0.2 -1,-0.3 0.935 108.2 48.6 -49.3 -54.6 1.4 -8.4 -5.0 A A
45 45 A Q H X S+ 0 0 46 -4,-1.4 4,-2.6 1,-0.2 5,-0.3 0.927 109.7 52.7 -58.8 -42.9 -2.0 -9.7 -3.8 A A
46 46 A I H X S+ 0 0 55 -4,-2.9 4,-2.8 1,-0.2 -1,-0.2 0.952 111.6 45.8 -58.2 -49.0 -0.7 -10.0 -0.3 A A
47 47 A A H X S+ 0 0 1 -4,-2.6 4,-3.3 -5,-0.3 5,-0.3 0.964 110.9 53.1 -58.0 -50.9 0.5 -6.4 -0.3 A A
48 48 A d H X S+ 0 0 10 -4,-3.0 4,-3.2 1,-0.2 5,-0.2 0.941 113.5 42.1 -50.1 -54.5 -2.8 -5.2 -1.8 A A
49 49 A T H X S+ 0 0 74 -4,-2.6 4,-2.8 1,-0.2 -1,-0.2 0.907 115.5 50.6 -62.6 -39.9 -4.9 -6.8 0.8 A A
50 50 A a H X S+ 0 0 1 -4,-2.8 4,-2.9 -5,-0.3 -1,-0.2 0.917 113.9 44.2 -62.2 -42.8 -2.5 -5.8 3.6 A A
51 51 A L H X S+ 0 0 6 -4,-3.3 4,-3.2 2,-0.2 5,-0.3 0.964 111.7 51.9 -67.3 -50.3 -2.6 -2.2 2.4 A A
52 52 A K H X S+ 0 0 95 -4,-3.2 4,-2.6 -5,-0.3 -2,-0.2 0.919 113.7 46.1 -47.1 -46.4 -6.3 -2.2 1.9 A A
53 53 A S H X S+ 0 0 66 -4,-2.8 4,-2.5 -5,-0.2 -1,-0.2 0.934 109.8 54.1 -63.2 -44.5 -6.5 -3.4 5.5 A A
54 54 A A H X S+ 0 0 8 -4,-2.9 4,-1.9 2,-0.2 3,-0.4 0.962 110.0 46.4 -55.0 -53.8 -3.9 -0.8 6.6 A A
55 55 A A H >< S+ 0 0 1 -4,-3.2 3,-0.6 1,-0.3 -1,-0.2 0.953 112.8 50.1 -52.1 -52.1 -6.1 2.0 5.1 A A
56 56 A G H 3< S+ 0 0 56 -4,-2.6 -1,-0.3 -5,-0.3 -2,-0.2 0.829 107.8 55.2 -56.1 -32.6 -9.2 0.5 6.8 A A
57 57 A A H 3< S+ 0 0 83 -4,-2.5 -1,-0.2 -3,-0.4 -2,-0.2 0.881 89.2 89.8 -67.2 -37.8 -7.2 0.3 10.1 A A
58 58 A I X< - 0 0 23 -4,-1.9 3,-0.5 -3,-0.6 -42,-0.0 -0.344 68.6-149.6 -63.6 139.5 -6.4 4.1 10.0 A A
59 59 A S T 3 S+ 0 0 97 1,-0.2 2,-2.0 -2,-0.0 -1,-0.1 0.992 90.4 30.0 -74.8 -74.5 -9.1 6.3 11.7 A A
60 60 A G T 3 S+ 0 0 47 -41,-0.1 -1,-0.2 2,-0.1 2,-0.1 -0.233 89.5 172.4 -79.2 51.9 -9.2 9.7 10.0 A A
61 61 A I < - 0 0 38 -2,-2.0 2,-0.8 -3,-0.5 -42,-0.2 -0.410 29.8-141.9 -70.3 131.9 -8.1 8.0 6.7 A A
62 62 A N > - 0 0 60 -44,-2.9 4,-2.6 1,-0.2 5,-0.2 -0.834 10.4-163.0 -93.6 109.2 -8.1 10.2 3.6 A A
63 63 A L H > S+ 0 0 107 -2,-0.8 4,-3.3 1,-0.2 5,-0.3 0.906 87.0 52.4 -62.3 -42.4 -9.3 7.9 0.8 A A
64 64 A G H > S+ 0 0 52 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.919 111.9 44.9 -59.4 -44.9 -8.0 10.2 -2.0 A A
65 65 A K H > S+ 0 0 70 2,-0.2 4,-1.1 1,-0.2 7,-0.2 0.921 114.1 50.5 -68.5 -39.9 -4.5 10.4 -0.6 A A
66 66 A A H >< S+ 0 0 0 -4,-2.6 3,-1.2 -48,-0.2 15,-0.4 0.982 114.8 42.4 -55.4 -56.6 -4.6 6.6 0.0 A A
67 67 A A H 3< S+ 0 0 33 -4,-3.3 14,-0.6 1,-0.3 4,-0.3 0.878 121.7 42.6 -61.3 -34.8 -5.7 5.9 -3.6 A A
68 68 A G H 3X S+ 0 0 23 -4,-2.8 4,-2.7 -5,-0.3 -1,-0.3 0.451 86.4 98.4 -89.0 -0.9 -3.2 8.6 -4.8 A A
69 69 A L H S+ 0 0 16 0, 0.0 5,-0.6 0, 0.0 -1,-0.2 0.876 112.8 52.3 -65.0 -29.5 1.4 5.4 -5.2 A A
71 71 A S H >45S+ 0 0 104 -4,-0.3 3,-0.7 3,-0.2 -2,-0.2 0.915 112.7 44.7 -65.2 -39.6 0.9 8.3 -7.6 A A
72 72 A T H 3<5S+ 0 0 79 -4,-2.7 2,-1.2 1,-0.3 -3,-0.2 0.965 120.7 39.6 -69.4 -49.9 2.5 10.6 -4.9 A A
73 73 A c T 3<5S- 0 0 5 -4,-3.3 -1,-0.3 -5,-0.2 -2,-0.1 -0.588 103.5-136.5 -90.5 70.2 5.3 8.0 -4.3 A A
74 74 A G T < 5 + 0 0 64 -2,-1.2 2,-0.3 -3,-0.7 -3,-0.2 0.052 42.1 158.5 -29.0 110.5 5.7 7.1 -8.0 A A
75 75 A V < - 0 0 30 -5,-0.6 2,-1.5 2,-0.1 -43,-0.0 -0.980 50.6-114.8-143.2 152.7 5.9 3.3 -7.9 A A
76 76 A N + 0 0 116 -2,-0.3 -2,-0.1 -44,-0.1 0, 0.0 -0.422 61.6 137.4 -89.2 63.5 5.3 0.5 -10.5 A A
77 77 A I - 0 0 19 -2,-1.5 2,-1.4 2,-0.1 -2,-0.1 -0.925 49.0-145.8-102.7 126.8 2.4 -1.2 -8.7 A A
78 78 A P S S+ 0 0 65 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 -0.324 78.3 61.1 -88.0 59.0 -0.5 -2.3 -11.0 A A
79 79 A Y S S- 0 0 25 -2,-1.4 2,-0.3 11,-0.0 -2,-0.1 -0.904 83.5-113.7-169.1 151.9 -3.2 -1.6 -8.4 A A
80 80 A K - 0 0 127 -2,-0.3 2,-1.5 2,-0.1 -13,-0.1 -0.675 29.6-119.4 -95.4 148.8 -4.4 1.5 -6.5 A A
81 81 A I S S+ 0 0 5 -14,-0.6 -12,-0.3 -15,-0.4 -13,-0.1 -0.630 70.2 115.4 -90.4 83.8 -3.8 1.6 -2.7 A A
82 82 A S S S- 0 0 14 -2,-1.5 2,-2.4 3,-0.1 3,-0.3 -0.997 74.8-112.9-150.4 144.8 -7.5 1.9 -1.6 A A
83 83 A P S S+ 0 0 38 0, 0.0 3,-0.1 0, 0.0 -2,-0.1 -0.420 106.4 53.9 -80.1 71.4 -10.0 -0.2 0.4 A A
84 84 A S S S+ 0 0 101 -2,-2.4 -3,-0.0 1,-0.4 -32,-0.0 0.216 77.7 86.7-159.3 -58.7 -12.2 -0.8 -2.6 A A
85 85 A T S S- 0 0 55 -3,-0.3 -1,-0.4 -5,-0.1 2,-0.3 -0.290 73.3-129.7 -52.4 136.4 -10.3 -2.3 -5.6 A A
86 86 A D - 0 0 84 1,-0.1 -1,-0.1 -3,-0.1 -38,-0.0 -0.698 25.0-179.0 -82.1 147.2 -10.2 -6.1 -5.4 A A
87 87 A d > + 0 0 10 -2,-0.3 3,-3.0 -42,-0.1 -1,-0.1 0.685 64.5 81.2-111.8 -31.5 -6.7 -7.6 -5.8 A A
88 88 A S T 3 S+ 0 0 52 1,-0.3 -43,-0.1 -43,-0.1 -42,-0.1 0.778 96.8 48.4 -45.5 -35.1 -7.3 -11.5 -5.5 A A
89 89 A K T 3 S+ 0 0 160 -44,-0.1 2,-0.6 2,-0.0 -1,-0.3 0.185 80.6 122.9 -91.9 18.3 -8.4 -11.5 -9.2 A A
90 90 A V < 0 0 35 -3,-3.0 -45,-0.1 -49,-0.1 -3,-0.0 -0.719 360.0 360.0 -83.3 120.4 -5.4 -9.5 -10.6 A A
91 91 A Q 0 0 204 -2,-0.6 -50,-0.1 0, 0.0 -1,-0.1 0.232 360.0 360.0 -94.1 360.0 -3.5 -11.5 -13.3 A A