DSSP OUTPUT
==== Secondary Structure Definition by the program DSSP, CMBI version 3.0.1 ==== DATE=2019-06-21 .
REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 .
HEADER PLANT PROTEIN 02-JUN-04 1TI5 .
COMPND MOL_ID: 1; MOLECULE: PLANT DEFENSIN; CHAIN: A .
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: VIGNA RADIATA; ORGANISM_TAXID: 157791; .
AUTHOR Y.J.LIU,C.S.CHENG,Y.N.LIU,M.P.HSU,C.S.CHEN,P.C.LYU .
46 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) .
3438.4 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) .
32 69.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES .
11 23.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES .
1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES .
0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES .
5 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES .
3 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES .
11 23.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES .
2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES .
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** .
0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX .
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER .
0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER .
0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET .
# RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA CHAIN AUTHCHAIN
1 1 A R 0 0 238 0, 0.0 2,-0.3 0, 0.0 45,-0.1 0.000 360.0 360.0 360.0 168.5 68.8 33.6 0.0 A A
2 2 A T - 0 0 48 43,-0.3 2,-0.4 44,-0.2 43,-0.3 -0.994 360.0-143.4-162.5 159.0 68.8 37.4 -0.2 A A
3 3 A a E -A 44 0A 52 41,-2.0 41,-2.3 -2,-0.3 2,-0.4 -0.984 15.6-150.7-130.3 138.4 70.7 40.5 0.9 A A
4 4 A M E -A 43 0A 120 -2,-0.4 39,-0.3 39,-0.3 2,-0.2 -0.841 11.0-172.4-111.2 146.6 69.2 43.8 1.9 A A
5 5 A I E -A 42 0A 63 37,-1.0 37,-1.1 -2,-0.4 2,-0.8 -0.672 34.6 -93.4-123.8 179.7 70.7 47.3 1.5 A A
6 6 A K E -A 41 0A 125 35,-0.2 2,-1.0 -2,-0.2 3,-0.4 -0.836 29.1-173.1-101.4 108.4 69.7 50.8 2.7 A A
7 7 A K >> + 0 0 25 33,-5.5 3,-1.7 -2,-0.8 4,-0.5 -0.319 32.1 142.8 -94.8 55.7 67.7 52.6 0.0 A A
8 8 A E G >4 + 0 0 144 -2,-1.0 3,-0.7 1,-0.3 -1,-0.2 0.766 60.9 73.1 -65.5 -22.3 67.7 55.9 2.0 A A
9 9 A G G 34 S+ 0 0 72 -3,-0.4 -1,-0.3 1,-0.2 -2,-0.1 0.605 93.5 56.7 -68.9 -6.4 68.0 57.7 -1.4 A A
10 10 A W G <4 S- 0 0 87 -3,-1.7 -1,-0.2 30,-0.1 -2,-0.2 0.728 119.6 -97.3 -95.9 -24.7 64.4 56.8 -2.0 A A
11 11 A G << - 0 0 31 -3,-0.7 -1,-0.1 -4,-0.5 -2,-0.1 -0.106 50.0 -57.5 117.9 141.8 63.0 58.4 1.2 A A
12 12 A K - 0 0 164 -4,-0.1 2,-0.3 27,-0.1 27,-0.3 0.101 61.4-115.9 -41.1 164.5 62.1 57.1 4.7 A A
13 13 A b - 0 0 16 21,-0.2 -1,-0.1 1,-0.1 20,-0.0 -0.818 21.8-168.4-111.1 151.9 59.5 54.2 4.7 A A
14 14 A L S S+ 0 0 128 -2,-0.3 -1,-0.1 24,-0.0 2,-0.1 0.722 76.7 16.8-106.3 -31.3 56.0 54.2 6.2 A A
15 15 A I S S- 0 0 78 17,-0.1 -2,-0.1 1,-0.0 4,-0.0 -0.148 84.4-102.3-117.2-145.3 55.2 50.5 6.0 A A
16 16 A D S > S+ 0 0 109 16,-0.1 4,-0.6 -2,-0.1 15,-0.2 0.610 115.0 35.1-119.4 -26.4 57.2 47.3 5.5 A A
17 17 A T H > S+ 0 0 99 2,-0.2 4,-2.9 3,-0.1 5,-0.2 0.772 96.5 80.4 -98.7 -32.3 56.5 46.6 1.8 A A
18 18 A T H > S+ 0 0 56 1,-0.3 4,-1.2 2,-0.2 -1,-0.1 0.904 102.2 41.5 -40.6 -45.8 56.4 50.2 0.5 A A
19 19 A c H > S+ 0 0 4 1,-0.2 4,-2.3 2,-0.2 -1,-0.3 0.956 109.2 58.0 -68.5 -48.0 60.2 50.0 0.5 A A
20 20 A A H X S+ 0 0 14 -4,-0.6 4,-3.0 11,-0.4 5,-0.3 0.871 99.1 62.6 -50.6 -36.8 60.3 46.5 -0.9 A A
21 21 A H H X S+ 0 0 119 -4,-2.9 4,-2.2 1,-0.2 5,-0.3 0.987 106.3 40.9 -54.6 -62.7 58.3 47.8 -3.9 A A
22 22 A S H X S+ 0 0 51 -4,-1.2 4,-1.6 1,-0.2 -1,-0.2 0.903 114.7 56.5 -53.3 -39.7 61.0 50.2 -5.0 A A
23 23 A d H >X>S+ 0 0 0 -4,-2.3 4,-1.4 18,-0.2 5,-1.1 0.989 109.3 41.8 -57.6 -62.1 63.6 47.5 -4.2 A A
24 24 A K H >X5S+ 0 0 124 -4,-3.0 3,-2.8 1,-0.3 4,-0.7 0.971 114.0 51.6 -49.6 -61.3 62.1 44.8 -6.5 A A
25 25 A N H 3<5S+ 0 0 124 -4,-2.2 -1,-0.3 1,-0.3 -2,-0.2 0.816 109.1 53.1 -47.5 -29.6 61.4 47.3 -9.3 A A
26 26 A R H <<5S- 0 0 164 -4,-1.6 -1,-0.3 -3,-0.7 -2,-0.2 0.749 138.3 -85.6 -79.2 -20.9 65.1 48.3 -8.9 A A
27 27 A G H <<5S+ 0 0 60 -3,-2.8 2,-0.3 -4,-1.4 -3,-0.3 0.653 89.0 121.3 121.2 37.8 66.1 44.6 -9.3 A A
28 28 A Y << - 0 0 59 -5,-1.1 16,-0.3 -4,-0.7 -1,-0.2 -0.811 69.2-120.9-124.3 168.0 65.7 43.2 -5.7 A A
29 29 A I S S- 0 0 74 14,-3.2 2,-0.3 -2,-0.3 15,-0.2 0.828 84.1 -58.2 -76.7 -28.8 63.7 40.4 -4.2 A A
30 30 A G E -B 43 0A 8 13,-1.9 13,-1.6 -6,-0.1 2,-0.3 -0.952 54.2-125.7 177.0-159.1 62.1 42.9 -1.8 A A
31 31 A G E -B 42 0A 10 11,-0.4 -11,-0.4 -2,-0.3 11,-0.3 -0.949 11.1-133.1-161.2-179.8 63.0 45.5 0.8 A A
32 32 A N E -B 41 0A 50 9,-0.8 9,-3.9 -2,-0.3 2,-0.5 -0.889 11.6-130.1-140.4 172.9 62.4 46.6 4.4 A A
33 33 A b E -B 40 0A 17 -2,-0.3 2,-0.6 7,-0.2 7,-0.2 -0.894 19.0-153.7-129.2 102.3 61.6 49.7 6.5 A A
34 34 A K E >> -B 39 0A 89 5,-1.7 5,-1.1 -2,-0.5 4,-0.9 -0.633 3.9-164.4 -78.8 120.3 63.8 50.2 9.6 A A
35 35 A G T 45S+ 0 0 30 -2,-0.6 -1,-0.2 2,-0.2 3,-0.1 0.891 86.4 66.7 -71.5 -36.7 61.9 52.3 12.2 A A
36 36 A M T 45S+ 0 0 182 1,-0.3 -1,-0.2 3,-0.1 -2,-0.1 0.875 128.0 9.4 -52.4 -35.0 65.2 53.0 14.1 A A
37 37 A T T 45S- 0 0 73 -3,-0.3 -1,-0.3 2,-0.1 -2,-0.2 0.266 96.0-129.3-128.0 9.4 66.3 55.1 11.1 A A
38 38 A R T <5 + 0 0 159 -4,-0.9 2,-0.3 1,-0.1 -3,-0.2 0.922 59.8 144.0 41.0 55.9 63.0 55.2 9.0 A A
39 39 A T E < - B 0 34A 19 -5,-1.1 -5,-1.7 -27,-0.3 2,-0.5 -0.834 52.4-116.6-122.6 162.0 64.9 54.0 5.9 A A
40 40 A c E - B 0 33A 3 -2,-0.3 -33,-5.5 -7,-0.2 -7,-0.2 -0.846 29.3-169.5-100.6 125.2 64.1 51.7 3.0 A A
41 41 A Y E -AB 6 32A 43 -9,-3.9 -9,-0.8 -2,-0.5 2,-0.4 -0.646 7.1-151.0-105.8 167.2 66.1 48.5 2.6 A A
42 42 A d E -AB 5 31A 0 -37,-1.1 -37,-1.0 -11,-0.3 -11,-0.4 -0.927 4.8-146.7-143.6 119.5 66.1 46.1 -0.4 A A
43 43 A L E -AB 4 30A 36 -13,-1.6 -14,-3.2 -2,-0.4 -13,-1.9 -0.618 20.5-174.8 -85.0 140.8 66.7 42.3 -0.4 A A
44 44 A V E -A 3 0A 35 -41,-2.3 -41,-2.0 -16,-0.3 2,-1.8 -0.850 42.8 -87.6-127.3 166.6 68.4 40.8 -3.4 A A
45 45 A N 0 0 132 -2,-0.3 -43,-0.3 -43,-0.3 -2,-0.0 -0.546 360.0 360.0 -76.3 89.9 69.3 37.2 -4.4 A A
46 46 A a 0 0 102 -2,-1.8 -44,-0.2 -45,-0.1 -2,-0.1 -0.967 360.0 360.0-118.8 360.0 72.6 37.2 -2.6 A A